Oreochromis niloticus (Nile tilapia): 100695952
Help
Entry
100695952 CDS
T06104
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100695952 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100695952 (nup214)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100695952 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
ANAPC4_WD40
WD40
NUP214
Motif
Other DBs
NCBI-GeneID:
100695952
NCBI-ProteinID:
XP_005459523
LinkDB
All DBs
Position
LG7:complement(19115520..19146037)
Genome browser
AA seq
2008 aa
AA seq
DB search
MSDDADSPPEREMKDFQFRQMKKVRVFEPTEDLPKDRSSLLAISNKYGLTFVGLDRTFKV
YLTRDILAADKGDGNSNEIVKGIPVLAEVTVELVLHHLALSCDELTLSVCGMSEEAGLSL
TFYDVRTFMNKGKLQKLPFAFHQPAVAPDVLVQDLKWNPVQVSVLAVCLSDGSIMILDVT
DSVNVQARLPSSSGITCICWSPKGKQVAAGKMDGTVTQYTPGLEEKKVIPCPQFFTPGEP
VKAVDVLWLKTYVFAVAYAAGDGSLETPPELVLISLPKKDEKVEPKFLNFGEFVFGSCTE
RQHHYFLSHVEDWDLVFAASAASIEVSVIARQDDKMWEVWLLEDSSRAELPVTETNEDTL
PLGLAIDYTSQQEIHITDEKTLPPAPTMLMLSTEGLLCPFALLNLNPGVKQLVVAPSNLA
LEGERLPKPGSLATQPPKIAASIPSAPAAFPSLGLTPAAASSSPSPATSSAAAPFSIVPK
APVSSAASGFTFSIPTTCSTSGPSAFSLGGSAPFGSGSSGFSFALKPPSDTPSAPSAFSF
NNLSVKPSAAPALTPQSLATPASQSAVKLNLNDRFPIVEATQPPFSFNSPLSKTVATTSS
SLTAPPSLASKPPAILAPVHQVQTSVSPAVVQKPSPAVQTRTQAPQQAAVSVKALEKQLQ
QKKDSDPIMAGILEEIAHFQKELDDLKARSAKADFKVGADEEMKELRKESEDLHIFTLEI
KETTESLHGDIGTLKTSLLEGFAGAEEAKTQSELSKDRNYRQLLYKKPLDPRSEEQLKEI
RRLYQYVMFAVEDVNDVLDVEWEKHLEKKKKQKHMVVPGREGLFTTLSNNLYIINQQKNR
LDQLVKELTSLRLYNKRTTPARSPATPMTASLENDLETLRDALLKTRLDPTPSKTKSPAV
KISPVKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDDASSTSSLSQSLEPH
PPHLEQEEEELQTRPPPMSSIPPTLSTPRHPTVVRTPSIQPGFGANQSTPFSKIQSGQGM
GFGLSPIASPIPTNKINLSGAESTALATKTVKHGAPPIERTAPVTISAQQAAATAALRRQ
MANKLAVINTSLTESTLKTVPQVVNVQEFKDKGTPVVVPSNISSSVPDPGSQVFATVSSS
QAKRNPVQGVQKMPAETTTIPQSSFVFGQPSKTDGSVAPPSSAEQTSSKGFSFNSVSSSF
SFASVTPGAGMPQVKDASKFSFGGNGKMVFGQAGEESFSFTSKSTSPGLGTGSPTLAPNA
TGEGAKPTSTTATLRIEPQPPKTAGGETLGIFSGLRVGQGEEAKDSSTKPAVAAFAFGDT
GLGKGKAATQFSFGTGLPKSGEDSSTPDLSEGAPSGSLFKPPESNAKPAFSVPQSGSASS
TFSASFSSLLAAAPETQEEPKAVPQPSVPASPPVKEPPTSEPEVESTSRPVIPEPAAPAA
TTEPTTATTQTPTVSTPAPALATPAPTPDPPSTLTVPKEANPPAPASALSTTETTPEPST
TATVPSSTAATAAPVTQAAPPAFQIPTSDKPGSIFTQPAPATTDSSSVGVTPVINTAAPT
ATTQTSTVVSSATATAVNNVFGQSAAPPASSAPASTGFGSAGFGTSTGFGKNVFAQVSGF
GQPASNTGTSSGFTFGQSAFGATSSSATTGGSLFGASTATNASSFSFGTSSANTVSSTGT
GLFGQSTNQAFGQSSGFGQGSVFGSNTTTSSSSGFSFGQPSGFGCSSANPVFGQQSSSGS
GFGQQQPSSGSLFGSSSANTAVSSGSLFGSSSANTAVSSGGGGFFSGLGGKPSEDAANKN
PFGTTSSTGAFGQSSQTGTNSLFGNSGAKTFSFGQSSFGEQKPSGTFSTGAGSVASQGFG
SFSTPSKPGGFGSAPVFGSPPSFGGSPAFGTGASFGSSPSFSSPIGSSAGKVFGEGTAAA
NMGGFGITTSAPAPVFRFAPPPSTPSFGALAGQSAPSFGSLAQQGPGFGSQPSTFTGFGQ
QPQPGGFSGNTFGSANQSNSQTFSSWRS
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgatgcggactcccctcctgagagggaaatgaaggattttcagtttcgtcag
atgaagaaagtcagagtgtttgagcccaccgaagatttgccaaaagacagatccagcctc
cttgccatctcaaataagtatggcttaacttttgtggggcttgacagaactttcaaggtg
tacttaactcgagatattctggctgctgataaaggtgatggcaactccaacgaaatagtc
aaaggaataccagtactggctgaagtgaccgtggaactagttttgcaccacttggctctc
agttgtgatgagctcacactgtccgtgtgtggcatgtctgaggaagctggcttgtcactc
acattctatgatgtccgcacgttcatgaacaagggaaaactacagaagctaccatttgca
ttccaccaaccagctgtagcacctgacgtcttagtgcaggacctgaagtggaatcctgtg
caggtgtctgtgttggctgtctgcctctctgatggcagtataatgattttggatgttact
gacagtgtcaatgtgcaggccaggctgccttcttcaagtggaattacctgcatttgctgg
agtccaaagggaaagcaagtagcagctggaaaaatggatggtacagtcacgcaatataca
ccaggactggaggaaaagaaagttatcccatgtccacagttcttcacccctggcgaacct
gtaaaagctgtggatgtactgtggctgaaaacctatgtgtttgcagtagcatatgctgct
ggagatggctcacttgagaccccccctgagctagtgttgatctcactcccaaagaaggat
gagaaagtggagccaaagtttttgaactttggtgaatttgtttttggaagctgtacggag
cgtcagcaccactacttcctcagtcacgtagaggactgggaccttgtgtttgcagcatca
gcagcttccattgaggtcagcgtcattgccagacaagacgataagatgtgggaagtttgg
ctcctagaagattcgagcagggctgagcttccagtgactgaaacaaatgaagacactttg
ccccttggcttagctatagactacaccagccagcaggaaatccacataactgatgagaag
accttgcccccagcgcccacaatgctaatgctttccacagagggattactttgtccgttt
gctctactcaacctcaatccaggggttaagcagctagtcgtggctccttctaacctggct
ttggaaggggagagacttcccaaacccggctctttggcaacccaaccacccaaaattgct
gcctcaatcccatctgccccagcagcatttccaagccttggtcttactccagcagctgct
tccagttctccatcccctgctacttcttctgccgctgccccattcagcattgttccaaaa
gctcctgtgtcatcggcagcatcaggcttcactttctccatcccaactacctgctccact
tcaggcccttcagctttctccctggggggttctgcaccttttggctcaggatcatccggc
ttctcttttgctttgaaacctccctctgacactccctctgcaccttcagctttttctttc
aacaacctttctgtcaaaccatcagcagcaccagctctaactcctcagagtcttgccact
cctgcgtcccagtctgcagtgaaactgaatctaaatgacagatttccaatagtggaggct
acacaacctcctttctcctttaactccccactgtccaaaacggttgccacgacttccagc
agtttgactgcccctccttctttagccagcaaaccaccagctattttagctccagtgcat
caagttcaaaccagtgtctctccagcagttgtccagaaaccttctcctgctgtccagacc
cgtacccaggctccacagcaggcggctgtcagtgtgaaggccctggagaaacagctacag
caaaagaaagactctgatcccatcatggctggcatattggaggagatcgcgcacttccag
aaggaattggatgaccttaaggcacgaagcgcaaaagctgactttaaggttggcgctgat
gaggaaatgaaggagttgaggaaagagtcggaagacctccatattttcaccctggaaatc
aaggaaactactgagtcactccatggtgacattggtacactgaaaacttcgctactggaa
ggctttgctggggcagaagaagccaagacccagagtgaattgagcaaagacagaaattac
agacagctactttacaaaaagcctctggacccacgcagtgaggaacagctcaaggagatt
cgaaggctataccagtatgtcatgttcgctgtggaggatgttaatgacgtcttggatgtg
gaatgggagaaacacttggagaagaagaaaaagcagaaacacatggttgtgcccgggcgt
gagggtctgttcactacactgtccaataatctgtacatcatcaaccagcagaagaacaga
ctggaccagctggttaaggagctcacttcactgcgcctctacaacaaaagaaccactcct
gccagaagtcctgcaacaccaatgacagctagtttggaaaatgaccttgagactttaaga
gatgctctcctgaaaaccaggctggaccctaccccttctaagaccaaatctccagccgtc
aagatatcaccagttaaacagtcccagctgcgcaactttctctcaaagggacagatgcct
cctgtccgctcaactgcaccagccaacctgtctcgctcagccttcctttcacctaaatac
tacgaggacttggatgacgcgagttcaacatcttccctgtcccagtccctggagcctcac
ccgcctcacttggagcaggaagaagaggagttgcagacacggccccctcccatgtcctcc
atacctccaacattgtccaccccccgccatcctaccgttgtgaggaccccctctatccag
ccgggctttggagccaaccagtccacccctttctctaaaattcagtcaggacagggtatg
ggctttggactcagccctattgccagccccattccaacaaataagatcaacctcagcggg
gctgagagcacggctctcgccacaaagacagtcaagcatggagctccaccaattgagagg
accgcacccgtcaccatctctgcccagcaggctgcagccactgctgctttacgcaggcag
atggccaataagttggctgtgatcaatacttcactgacagagtccaccttgaagactgtt
cctcaggtggtcaatgttcaggagttcaaggacaaggggactcctgtggtggttccttcc
aacatcagctcctcggtaccagatccaggatctcaggtctttgcaacagtttcttccagt
caggccaaacggaatcctgtccagggtgtccaaaaaatgcctgcagagactacaaccatc
ccacagagcagttttgtttttggtcagccgtccaaaactgatggttctgttgctcctcct
agctcagctgagcaaaccagcagcaagggtttttctttcaattcagtgtcctcaagcttc
agttttgcttcagttacaccaggagctggaatgccacaagtgaaagatgcaagtaaattc
tcttttggtggaaatggtaagatggtgtttggccaggctggagaagagtcattctccttt
acctcaaagtccacctcccctggtcttggcactgggtctcccactttggctccaaacgca
acaggtgaaggtgctaaacccacctcgaccacagccactctgaggatagagccacagcct
ccaaagacagctggtggcgagactctgggcattttttctggactaagggtgggccaagga
gaagaagctaaagattcttccactaaacctgctgtggcagcgtttgcatttggggacact
ggacttggcaagggcaaggcagcaacacagtttagttttggaacaggtcttccaaaatct
ggagaagattcttcaacaccagacttgtccgaaggggccccctcaggcagtctgtttaag
cctcctgaatcaaacgccaagccagccttctccgttccacagtctggttcagccagctca
actttctccgcatctttcagtagtcttcttgcagccgcaccagagacacaagaagaacca
aaagctgtccctcagccttcagtacctgcttcgccccctgtaaaagaacctcccaccagt
gaacctgaagtagagagcaccagtcgtcctgtgatacctgaacctgcagcacctgcagcc
accacagaacccaccacagcaaccacccagacccctacagtgtcaacacctgctcctgct
ttggccacacctgcccctaccccagaccctccctcgactttaactgtgccaaaagaagca
aaccctccagcaccagccagtgccctgtccacaacagaaaccaccccagagccatctacc
actgctactgtaccctcttcaactgctgccactgcagcacctgtaactcaggcagctcca
ccagcattccagatccccacgtctgataagccaggctccatttttactcagcccgctcct
gcaactacagacagtagttctgtcggagtcacaccagttatcaacacagctgccccaact
gcaactactcaaacctctaccgttgttagtagtgcaacagcgactgctgtgaataacgtg
tttgggcaatctgctgcacctccagcttcctcggccccagcatcaacaggattcggctca
gctgggtttggtacatcaactggttttggcaaaaatgtgtttgcccaggttagtggcttc
ggccagcctgcaagcaacactggaacatcgagtggatttacttttggacagtctgcattt
ggagccacttctagtagtgcaactactggcggaagtcttttcggtgcttctactgctacc
aatgcaagttctttctcctttggaacgagcagtgccaacacagtaagcagcactggcact
gggctgtttggacaaagcacaaaccaggcttttggccaaagctctggatttggacagggt
tctgtgtttgggagtaacaccaccacatcctcatcttcaggattcagctttggacaaccg
tcaggttttggctgctcttctgccaacccggtgtttggccagcagtctagcagtggcagt
ggatttggacagcagcagccatcatctgggagtctctttggttcaagttcagccaataca
gcagtctcatctgggagtctctttggttcaagttcagctaatacagcagtctcatctggt
ggtggaggatttttcagcggcctgggaggcaaaccaagcgaggacgctgccaacaagaat
ccgtttggcaccacttcctccactggagcgtttggacagtctagtcagacaggtaccaac
agtctcttcggtaatagtggtgccaagaccttcagctttggacagtcctcctttggggag
cagaaaccttctgggaccttcagcactggtgctggaagtgtggcatcccagggctttggc
tcattctctacaccatcaaaaccaggtggctttggcagtgctccagtgtttgggagtcct
ccttcttttgggggttccccagcatttggtactggagcatcttttggctcaagcccttca
ttcagcagccccattggttcctcagctggcaaagtgtttggagagggcacagctgctgcc
aacatgggaggatttggtatcacaacctcagcacctgctccggttttcaggtttgcccca
cctcctagcactccttcctttggcgcactagctggtcagagcgctccttcattcgggagc
ctggcccagcagggacctgggtttggaagtcagcccagcaccttcacaggttttggacaa
cagccacagccaggaggattctctggaaacacctttgggtctgcaaaccaatcaaattct
cagacattttccagttggagaagctag
DBGET
integrated database retrieval system
