Oreochromis niloticus (Nile tilapia): 100697114
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Entry
100697114 CDS
T06104
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100697114
03036 Chromosome and associated proteins [BR:
onl03036
]
100697114
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100697114
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100697114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100697114
NCBI-ProteinID:
XP_005448087
Ensembl:
ENSONIG00000032742
LinkDB
All DBs
Position
LG8:22682692..22704158
Genome browser
AA seq
1985 aa
AA seq
DB search
MPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGVGGDGPNANMAAVSDSGTAASSLALT
SSSVAASTTTSNYANSMWGASSGSQASSQGREKVIVDGNDLEEWPSIAGSDGGSSGNNGM
PVNSISASGNQSSPTSSFSLPNECMQSSSSSAWVTAASQGHLGGGIAVTAAGPLLQQSSS
LSKAPAVPGSHDASGSVDGSSGIPGANFNPNANPSAWPALVQQDGPAAVGEGGQSSFHHQ
GPGGSANNSASLGAAGVLGGHPSLSVNQSNTHQHQLHQMQSRDREMGGGNWDSKSAGPKI
AGGEGIGGGMDHGAGGSGMSEEHSLVSSWRGQPSYPAANSKTGASRTDGWESGGTCTGVF
GAAEGDNGTSGWGYQSSTSGVNVWGSAGNGGNMSQTSGVSQGGWGLSGDGGERGISGSEW
GGNSGGVGGPNPGGEGMSGACSSNSSSSGGSTAGNPPTASSSSSTATTTTRAWDNQKGEG
ETGEWGEVVGGQGGRGGSSSSGGNSRSGGTPNSSRPRRQAVNAEAALQSLLNRSDLDPRV
LSNTGWGQTQIRQNTEWNIDEHAGQSKGGSSSATSKHPPSLSGPQYSSGPRTLSTDSVAP
GVSPSLVPSTGSSGEGWESSSNSSSSGASLSGRAPPPIGPNMRNLGVSQSGPVTPTGPGI
GSGVVPGSSQQGKATGWGGGGMGAGDCQEPTGWGSDEYRGSSRGEKGGWGDLGQQSDPVT
GGWGRSQDEKGTGGWKDMGGNGGGGWGSEQKAGVGKNWGEQDSKLNSGGGGWGDERKNGG
GHSGGDLGVSGWGDWGESAPRRTWGAGGTGGGGSGGGGIGVVGGMGSKPQQSWSGGNKMH
QMPNSQSGSITGPQAQLQQQQSQPRNQHPQLHQALDQGAMQGVGGRKLISQAQNQNQSSG
WTSGPIPGVSGGDGSGSEPSGWEEPSPQSISRKNEIDDGTSAWGDPDHYKPVNLWDKNSG
HAVQGQAPAQQQQQQGPPVQQQPSRQTAALGGNRDFSTGPGKSSAMGPSGWGSTSPTSPT
VDNGTAAWGKPSDAPTGWGDPDDAGGKTTCWGNPSSNPIKSGSKTMQDGWGNKESPVAAS
RNPSWEDEEEGGGMWNSTGSQGSGSSWGQGSNGGWGQSHTGKKPSSKGPLKAGGGEPWMG
PINRQFSNMGLLNDDPSGPNIDPTSGSIQDKKIEMDKRGMGMTDYNGDMRKGGRGGSGGV
SYRPPGSKEAAPGDAGIYYEKTLPLINQDGCLGEEGPCSLYSPPSVYKPHSLFNHSIPFR
QAGHNIFGSSGGMAQSRHQPSIPQINQSPGIRAQVPHQFLSPQVPGSVLKQMPPPSGNMG
GVGGVGGVAGVGGGVFPPQLSPQHIAMLSSIYPPHIQFQLACQLLLQQQQQPQQQQQQQL
LQNQRKFTPNTRQQTDPQQLARIMAVLQQQRQVGGLSGSSKLSPSHHGGSGGGGPKLPGA
DPLSHPGLAASVADLHQKNLGPYSGFGSGVNLTGLDLGGSVVGGPGAMKDLGSQQSRFKW
MMEGNCSPDTSSSENAFHKNGPVTPIKMPGGSPYSQYDMMVGEGLSDNWHRTPGNKMCAK
PASTPSWPPEFQPGVPWKGIDRVDPESDPYMTPGSMMGNTVPPTLNDTEHQLLQDNTDST
PPLNTLLPSPGAWPYSASDSPLNAHNSAKYTEYKTSWPPEPIGPKSWKASRGSSQTQLSR
PPPGLASQKQPSPSPWSGGAPRLAGRSWSSGSNSTGSTWSDGSSRESCWLVLSNLTPQID
GSTLRTICMQHGPLLTFHLGLTQGTALIRYSSRQEAAKAQSALHMCVLGNTTILAEFMSE
EDVARYIAHSQAGGAGSGGTAPGSQGSGPTATSTVGANSNGGSCERGGAGGNGGVGGVDG
ASTVGGAGNGGAGSSSSAWQSLESTGSSSDQSATQGPGLGIFTQWSTNGTGIGGAGGVEA
GRQGLWGSVGGMGGQGTPAVASGLLRRLRIVTRWAAPPRCFQGTCWAGGPTPSEGPADTH
VLHLR
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgccgagagaagtgccgccacgattccgctgccagcaggaccataaagtgctactgaag
aggggtcagccgccactgtcctccatgctgctgggagggggggtgggaggagatggcccc
aatgcaaacatggctgctgtttcagattccggcacagctgcctcctcattggctctcacc
tcatcatcagttgctgcttctactactacttctaattatgcaaattccatgtggggggca
agctcaggcagccaggcctcctctcagggcagggagaaggtgattgttgatggcaatgac
ctagaggagtggcctagtattgctggcagtgatggagggagcagcggcaacaacggaatg
cctgtgaatagcattagtgcctctggcaaccaatcctcacccacttcctcgttctctttg
cccaatgaatgtatgcagtcgtccagcagttcagcgtgggtgacggctgcctcccagggt
catcttggaggaggtattgcagtaactgcagctgggcctctgctacaacagtcctcctca
ctttccaaagcccccgctgtgccagggagccatgatgccagtggctccgttgatggcagc
agtgggattccaggtgccaacttcaatccaaatgccaacccttcagcctggcctgcactg
gtgcagcaggatggccccgctgctgtaggtgaaggaggtcagtcttcctttcaccatcag
ggccctggcgggtctgccaacaactctgcttccctgggggcagctggtgtcctggggggt
cacccatctttatctgtgaatcaatcaaacacccatcagcaccaacttcaccaaatgcaa
tccagagacagagaaatgggtggagggaattgggacagtaaatcagcgggaccaaaaatt
gcggggggagaagggatagggggaggaatggaccatggtgcgggaggaagtgggatgagt
gaagagcacagccttgtctcctcatggagaggccagccttcttaccctgcagctaactcc
aaaacgggtgcctcaaggactgatggttgggagagtggaggaacttgcacaggggtattt
ggagctgcagaaggggataatgggacttcaggttggggttatcaaagttccacaagtggg
gttaatgtttggggtagtgctggaaatgggggcaacatgagtcaaacctctggggtatct
cagggagggtgggggttatcgggagatggtggtgaaagagggatttctggtagtgagtgg
ggtgggaactctggtggggttggtggaccgaatccaggaggtgagggaatgagtggagcc
tgcagcagtaacagcagcagcagtggaggcagcacagcggggaacccgcccactgcttcc
tcctcttcctcaacagccactactactaccagagcctgggacaatcagaaaggagagggt
gaaacgggagaatggggtgaggttgtaggaggacagggaggacggggtggatcgtcgtcc
agtggtggaaattctagaagtgggggcacgcctaatagcagccgaccacgtcggcaggca
gttaatgcagaagctgccttacagagcctgctaaatcgctctgatctggatcctcgggtc
ctgtctaacacaggatggggccagacacagatccgccaaaacacagaatggaacattgat
gaacatgcaggacagagtaaaggtggatcctcatcagctacatcaaaacatccaccttct
ctcagtggtcctcaatattctagtggacctaggaccttaagcactgattctgtggctcca
ggggtcagcccttccctggttccatccactgggtcctctggtgagggctgggagagcagc
agcaacagtagcagtagtggagcttctttgtctgggagagccccaccacctatcggcccc
aacatgagaaatcttggcgtatcacaatctgggccagtaactccaactggacctggtata
gggtcaggagtagtgccaggatctagccaacaggggaaagctacaggctggggtggagga
gggatgggggctggggattgccaggagcccacaggttggggtagcgatgaatatagaggc
agtagtagaggagaaaaaggaggatggggtgatcttgggcaacaaagtgaccctgtgact
ggaggctggggaagaagtcaggatgaaaaagggacaggagggtggaaagacatgggtggg
aatggagggggtgggtggggatcagaacagaaggctggggtaggtaagaattggggagag
caagactccaaattaaacagtggtggaggagggtggggagatgagagaaagaatggagga
gggcactcaggtggggatttaggtgtgagtgggtggggagactggggtgaaagtgctccc
cggaggacctggggggcagggggtacgggtggtggaggaagtggaggagggggtattggt
gttgttggaggcatggggtccaaaccccaacaaagttggagtggaggaaacaaaatgcac
cagatgccaaacagccagtcgggctccatcacaggcccacaggcacaactgcaacagcaa
caatcacagccccgcaatcagcatccacagctgcaccaagcgttggaccaaggggctatg
caaggggttggggggaggaaactaatctctcaagcccagaatcagaaccaaagctcaggc
tggacttcagggcccatccctggtgtctctggaggagatggaagtggatctgaaccaagc
ggctgggaggaaccctcaccgcagtccataagccggaagaacgaaatagatgatggaaca
tcagcatggggagacccagatcattacaaaccggtcaacctgtgggataagaacagtggt
catgcagtccagggccaggccccggcccagcagcagcaacagcagggacctccagtgcag
cagcagcccagcaggcagactgcagcacttggaggtaacagagacttcagcactggacct
gggaagtcttcagctatgggtccatcaggctgggggagcacttccccaactagtcctaca
gtagacaatggcacagcagcttgggggaagcctagtgatgctcctactggttggggagac
cctgatgatgctggagggaagacaacatgctggggaaacccttcttcaaatcccatcaaa
tctggttcaaagactatgcaagatggctgggggaacaaagagagccctgtggcagcctca
cgtaacccaagctgggaggatgaggaggaaggtggcggcatgtggaatagtactggctcc
cagggaagtgggtcttcttggggacagggaagcaatggtggctggggtcagagccacact
gggaagaaacccagcagtaagggcccattgaaggctggtggaggagagccatggatgggc
cccattaacagacagttctctaacatggggttgctgaatgatgatcccagtggcccaaac
attgacccaacttcaggttctatccaggacaagaaaatagagatggataaaagaggcatg
ggaatgactgattacaatggagacatgaggaagggaggaagaggaggaagtgggggagtg
tcttatcgtcctcctggttccaaagaggcagcacctggggatgctgggatttactatgaa
aagacattgcctttgatcaatcaggatgggtgccttggggaggagggtccttgctctctg
tactctccaccctctgtctacaagccccattccctcttcaaccactctatcccctttaga
caagctggtcacaatatctttggcagtagtggaggaatggcccagtcaagacatcagcca
agtatcccgcagataaaccagtcaccagggatacgagcgcaagtgcctcatcagttcctg
tcacctcaggtgccaggctctgtgctgaagcagatgccccctcccagtgggaacatgggg
ggagttggtggtgtgggaggggtggcaggagttgggggaggtgtgttccctccgcagctg
tccccccagcatattgcaatgctcagcagcatctacccacctcacatccagtttcagctg
gcttgtcagctcctcctccaacagcagcagcagccgcaacaacagcagcagcagcagcta
ctgcaaaaccagaggaagttcacaccaaacacacgtcagcagactgaccctcagcagctg
gccaggatcatggcggtgctccagcagcagaggcaggtcggggggttaagcggcagctcc
aaactatccccctcccaccatggtggaagtggaggagggggtcctaaactgcctggggct
gatcccctgtcccacccaggcctggcagcatctgtggctgacctacaccaaaaaaatcta
ggaccatactctgggtttggctctggggtgaaccttacaggtctggacctaggtggctct
gtggtgggggggcctggagccatgaaggacctagggagtcagcagtcccgtttcaagtgg
atgatggagggaaactgttctccagacacttcctcatctgagaatgcatttcataaaaat
ggtcctgtcacccccataaagatgccagggggctcaccatattcgcagtatgacatgatg
gttggagaagggctgagtgacaactggcatcgcacccctggcaacaagatgtgtgccaag
cctgcctccacaccaagctggccccctgagttccagcctggtgtgccatggaaaggaatt
gaccgtgttgatcctgagtctgacccctacatgaccccagggagcatgatgggaaacaca
gtgccacccactctcaatgatacagagcaccaattgttacaagacaatactgattccacc
cctcccctcaacaccttgctgccttcacctggtgcctggccctacagtgcctcagacagt
cccctcaacgcacacaactcagcaaagtacacagaatacaagaccagctggcccccagag
cccattggacctaagtcttggaaagccagtcgtggcagcagccagacccagttatcccgc
ccacctccaggcctagccagtcaaaagcagccatcgccttccccttggtcaggaggagcc
cctcgattggctggccgcagctggagtagtggctcgaacagcactggctcgacctggagt
gacggcagctctcgagaaagctgctggttggtgctcagcaacctcacgccacagattgat
ggatccactctgagaaccatctgcatgcagcacgggccgttgttgacctttcaccttggc
ctgacccagggtactgctctgattcgctacagctccagacaagaggcagccaaggctcag
agtgcacttcacatgtgtgttctgggtaacacaaccatcttagcggagtttatgagtgag
gaagatgtggctcgctacattgcacattcccaggctggaggagcaggaagcggaggaact
gcacccggctcccaaggctccgggcctacagcaacctccacagttggggctaacagtaac
ggagggagctgtgagagaggtggagcaggaggaaatggtggggtaggaggagtagatgga
gcatccacagttggaggggcaggaaatggaggagctgggtcttccagttctgcatggcaa
agtctagaaagcacaggcagctcgtcggaccagtctgccacccaggggcccggattgggc
attttcacccaatggagcaccaacggcaccgggataggtggggctggaggtgtggaggcc
ggaaggcagggtctgtggggaagtgtgggtgggatggggggacagggtaccccagcagta
gcctctgggcttctccggcgcttgaggatcgtcaccagatgggcagccccgcctcgctgc
ttccaggggacctgctgggcgggggggccgactccatctgaggggccagctgacacacac
gttttacacctaaggtga
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