Oreochromis niloticus (Nile tilapia): 100706122
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Entry
100706122 CDS
T06104
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100706122
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100706122
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Ank_5
Motif
Other DBs
NCBI-GeneID:
100706122
NCBI-ProteinID:
XP_003446791
Ensembl:
ENSONIG00000004893
UniProt:
I3JBB3
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Position
LG10:complement(13809430..13821918)
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AA seq
879 aa
AA seq
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MNHRPLAVHRASGTAGYSDSPRARSRDNLLMYDDFGEETCCSGRCLGHSNSERQLMARLT
AAKRRQALRGPAYMFSAPSVSLSEVEQRFLEAAEYGNIPEVRRMLLHVPNLNVNAVDYMG
QNALQLAVANEHLEVTELLLARADLARVGDALLLAISKGYVRITETLLGHPSFRDARRLS
ASPVQADMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVYTLLSKGARIDPPHDYFCG
CDSCNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLANIEKEF
KNDYSRLSSQCKDYVVGLLDLCRSTEEVEAILNGETDSDDSYDVPGRPSLTRLKLAIKYE
LKKFVAHPNCQQQLLSIWYENLPGLRQQTTAIKLLVVLAVAIGLPGLAVAYWIAPCSRVG
KVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLPNMTHHQLPGSSDPLLLYRMTT
TPFTWMEILIISWVMGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSCRFSAL
RHANLAQTSVYANYPTLINVKLPSDIHYFTMARIHWLPSDPQLVSEGLYAVAVVLSFSRI
AYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYRGAKQNDAFTT
LEESFKTLFWAIFGLSEVRSVVVNNEHKFIENTGYVLYGVYNVTMVIVLLNMLIAMINSS
FQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLATGIKSFLLQLADG
HSKEKNETQLNQLGVSKNSAYGASTSRTRYQKIMKRLIKRYIIKAQADRESDDITEGELK
EIKQDISSLRYELLEEKAQNLETLDGLLKRLGEISAPSS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaccgcttgcagttcatcgtgccagcgggactgcaggttacagcgacagc
cccagagccaggagccgtgataacctgctcatgtacgatgattttggagaggaaacgtgt
tgctccggacgatgccttggccacagtaactctgagagacagcttatggctcgtctcact
gctgctaaacgacgccaggctctccgtggacctgcctacatgttctcagctccctcagtc
agcctgtcagaggttgagcagcgtttcctggaagcagctgaatacgggaacataccagag
gtgcggcgtatgctgctgcatgtacccaacttgaatgtcaacgctgttgactacatgggc
caaaatgcactgcagctggcagtggccaacgaacacctggaggtgacggagctgctgctg
gcgagggcagacttggccagagtgggcgacgctctccttttagccatcagtaaaggttat
gttcgcatcacagagactttgctgggccacccttcatttagagatgcccgccgtctatcg
gcaagccccgttcaggcagacatgttggatgacttctatgcttatgatgaggacgggaca
aggttttctcatgacgtgactccagtgatactggctgcgcactgtcaggaatatgaaatt
gtttacaccctgctaagtaaaggggctcgcatcgatccgcctcatgactacttctgtggc
tgtgactcgtgcaactaccagcagcagtttgactccttcagccactcccgatcgaggatc
aatgcctacagaggactcgccagtcctgcttacctctccttgtctaatgaggatccagtg
ctggcagcactggagctcagcaatgaactggccatgctggctaatattgagaaagaattt
aagaatgactactcccgcctgtcgagccagtgcaaggactacgtggtgggccttctggac
ctgtgtcgcagcacggaggaagttgaggccatactgaatggagaaactgactcggacgat
agctatgatgtaccaggtcgcccctccctcacacggctcaaattagccatcaaatacgag
ctcaaaaagtttgtggctcatcctaactgccagcagcagctgctgagtatctggtatgag
aacctgcctggcctgagacaacaaaccactgccatcaaactgctggtggtgctggcggtg
gctataggactgcctggactggctgtggcttactggattgccccatgcagcagagtggga
aaagtgatgcgtagccccttcatgaagtttgtggctcatgcctcatccttcacaattttc
ctgggtcttctcatcctgaatgctgctgaccgctttgcaggcaccaccctgctgccaaac
atgacacaccaccagctcccgggcagctctgaccctctgctgctctaccgcatgactaca
acacccttcacttggatggagatccttatcatctcatgggtcatgggtatgatttgggcg
gaggtaaaggagatctggagtcaaggaccaggggagtacctggttgagccatggaacttc
ttggattttgggatgctcgccatctttctggcttcctttagctgccgcttctctgcgctg
agacacgctaacttagcacagacctctgtgtacgcaaactaccccacgttgattaatgtc
aaactgccttcggacatacactacttcactatggctcgtatccactggttgccgtcagat
ccccagttggtgtcagagggcctgtacgcagtcgcagtggtgctgagcttctctcggatt
gcttatatcctcccagccaatgaaagcttcggtcccctgcaaatctctttgggaaggaca
gtaaaggacatttttaagttcatggtcattttcatcttggtctttctggcgttcatgatc
ggcatgttcaacctgtactcttactaccggggtgcaaaacaaaatgatgccttcacaacc
ctggaggagagcttcaagacattgttctgggctatatttggactgtctgaggtcagatcc
gtagtggtcaacaacgaacacaaattcatcgagaacactggttacgtcctgtacggagtt
tacaatgttaccatggtgatagtgctgctcaacatgctcattgccatgattaatagttcc
ttccaggagattgaggatgatgctgacgtcgagtggaagtttgctcgtgcaaaactttgg
ttctcctactttgaggagggaaggaccctccctgtgcccttcaacctggtccccagccca
aaatctatgctcggactggccacaggcatcaagtccttcctcctgcagttagctgatgga
cacagcaaggagaaaaatgagacacaactcaaccagcttggagtaagcaaaaactcagca
tatggtgcttctaccagccgaaccagatatcagaagatcatgaagcggctaataaagcgg
tacatcatcaaagcgcaagcagacagagagagcgatgacatcactgaaggagagctgaaa
gaaatcaagcaggacatttccagtttgcgatatgagctgctagaggaaaaagcccaaaac
ctggagacgctcgatgggctgctgaagaggctgggagagatcagcgcgccttcatcgtag
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