Oreochromis niloticus (Nile tilapia): 100706800
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Entry
100706800 CDS
T06104
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03320
PPAR signaling pathway
onl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100706800
03320 PPAR signaling pathway
100706800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100706800
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100706800
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100706800
Nuclear receptors [BR:
onl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100706800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
100706800
NCBI-ProteinID:
XP_005479136
Ensembl:
ENSONIG00000002143
LinkDB
All DBs
Position
LG23:complement(42873311..42897467)
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AA seq
465 aa
AA seq
DB search
MWHPVASPGSGGSPGREIGYGHYSTGPMSTAHAHPPSMGSMVGHPSVISTSRPLPSPMST
LGSPMNGLASPYPVITSSLGSPSVSLQSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGL
QNLGNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDN
KECPIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPVDK
ILDAELAVEPKTETYSDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQ
VILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVEGLREKVYASLESYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatccagtggcatcacctggaagtgggggcagccctggaagggaaataggttat
ggtcactactccacagggccgatgagtacagcccacgcccaccccccttcgatgggcagc
atggtgggtcacccgtcagtcatcagcacctccaggcccttaccgtcccccatgtccacc
ttgggctcaccaatgaacggcctggcctctccctatccagttattacatcttccctgggc
tcgccctctgtatcgctgcagtctactcccaacatgaactttggaccactcagcagtcca
cagatgaactctatgaacagtgttagcagctcagaggacatcaagcctccgccgggccta
cagaatctgggaaacatcaactaccagtgtacgagcccgggagggatgtcaaagcacatc
tgtgccatttgtggggaccgctcctcaggaaagcactatggtgtgtacagctgtgaggga
tgtaaaggtttcttcaagaggactgtgcgcaaagatctcagctacacttgtcgcgataac
aaggagtgcccgattgacaagcgccagcgaaaccgctgccaatattgccgctaccagaag
tgcctggccatgggcatgaaaagagaagcggtgcaggaagagaggcagcgtgggaaagag
cggggtgagaatgaggtagaatccaccagcagtttcaatgaggacatgcctgtggacaag
atcctggatgctgagttggctgtagaacccaaaacggagacgtacagcgacggcagcccc
gggaactcgaccaatgaccctgtcaccaatatctgccaagcagcagacaaacagcttttc
actttggtggagtgggcgaaaaggatcccgcacttctccgagctccccctcgatgaccag
gtcatcttactacgagcagggtggaatgagctactaattgcctcattctcacatcgctcg
gtcacggtaaaagacggtatcctgctggcaacaggtcttcacgtccacagaagcagcgcc
cacagtgctggagttggctccatctttgacagagtactcacagagttagtgtctaaaatg
aaagatatgcagatggataagacggagctcggctgcttgcgagcgattgtcctcttcaat
ccagatgctaaaggtttgtctaacccatcagaggttgaggggctgagagaaaaggtctat
gcttcattggagtcgtatacaaaacagaagtacccggaccagcctggcaggtttgccaaa
ctgctgctgcgcctgcctgccctgcgctccatcggcctcaaatgtttggagcatctgttc
ttcttcaagctaattggggacacgcctattgacacctttttgatggagatgctggaggct
ccgcatcagatcacatga
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