Oreochromis niloticus (Nile tilapia): 100707060 Help Entry 100707060         CDS       T06104                                  Name (RefSeq) collagen alpha-2(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:onl00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100707060  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:onl00536]     100707060 Glycosaminoglycan binding proteins [BR:onl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100707060 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  100707060 NCBI-ProteinID:  XP_019207775 LinkDB All DBs Position LG23:20972252..20991149 Genome browser AA seq 1275 aa AA seqDB search MGEPGHRGPDGPPGKPGLDGQPGPAGATGEPGYPGSAGARGFPGLPGNPGLRGHKGHSGL LGPRGETGAAGAKGASGTPGAMGAPGPVGPPGMQGERGRAGTTGPVGKRGTPGHVGKPGP LGPIGIPGIPGFPGSPGMKGEAGPTGVRGSPGQQGPRGDVGRVGPPGPIGQQGASGQDGA PGPRGSAGIAGLQGPPGMVGPPGPPGPQGSTGALGAKGQLGDVGAPGFKGEAGVKGERGD HGAPGPLGPMGEDGKRGPRGDAGSIGPPGPPGETGPPGNRGFPGADGLPGPKGAQGERGL PGSSGAKGLSGDPGRNGESGLTGARGLTGLIGAQGAEGKQGPVGSAGDDGKQGPAGSTGN RGPAGPMGLPGPKGFLGDAGKAGEAGSPGAPGQRGPNGKDGERGAAGPPGPAGPAGKRGE QGSQGVFGFQGLPGTPGPPGESGKPGDKGLAGEIGEVGATGPRGERGSPGERGETGPNGL QGPKGSPGAPGPDGPKGSPGSKGAAGEPGGPGLQGIPGERGIPGPSGPKGDAGATGEKGP EGKAGADGARGLPGPIGPAGPSGPNGVKGETGPSGPTGRRGTRGIAGSTGEPGPTGAAGF PGPPGPDGQPGVKGETGEPGLKGEAGSPGPQGVAGKPGEQGPVGVTGLKGGRGTKGPTGS PGFPGLPGGVGPPGPLGAVGADGPIGAPGKQGPSGIRGENGGQGRQGEQGPPGPPGGTGE KGDSGEDGPPGPDGPPGPAGATGQRGIVGQPGVRGERGLLGLPGPAGPPGKAGAPGPQGS TGPPGGIGLPGATGPRGDPGPEGIAGAEGPPGKDGLVGERGDRGNPGPEGLAGGPGSPGT EGPVGITGSPGQMGENGERGPPGPQGQPGIRGKVGPQGPQGDKGAAGEPGERGQKGHRGF TGLQGLPGIEGATGDAGAIGVVGPSGPRGPPGVVGPPGKEGNIGHPGAMGPPGSRGSSGD VGAQGPTGEPGPPGPPGPPGPPTSLSEDLFAGLVDYEAQGIPEAVEFIEDAFAAEPPLLP EFNKDEALPNKNSATLRADTGIHATLKSLSGNLQNFRSPDGSKMNPAKTCQDIKNCYPQK SSGQYWIDPNQGSVKDAIRVFCNMETGETCISANPPNIPRKAWWTKSTPNDNKPIWFEAD MNGGTRFRYGNKEEQPNAVAVQLKLLQLLSKESHQNITYHCRNSVAYKDENSGNLKKALV LRAFNGQELRAQGSNRLRYTVIEDGCSKSSDAWGRTVIEYRTQTSTRLPIMDLAPMDIGQ ADQEFGLDIGPVCFS NT seq 3828 nt NT seq  +upstreamnt  +downstreamnt atgggggagccgggtcatcgaggacctgatggaccaccaggaaaacctggacttgatgga caacccggacctgcaggagcaaccggagaaccaggatatccaggatcagcgggtgcaaga ggattcccgggacttccaggtaatccaggactgagagggcacaaaggacacagtggactt cttggaccaagaggcgagactggagcagctggagcgaagggtgcttctggtactcctggt gcaatgggagctcctggtccagtgggaccacctgggatgcagggagaaagaggccgagcc ggaacgaccggccctgtgggtaaacgtggcacacccggccatgttggtaaaccaggtcct ctggggccaataggaatccccggtataccaggatttcccggtagccctggaatgaagggt gaagcgggaccaacaggggtcagaggaagtccgggacagcaggggccaaggggcgacgtt gggcgtgtcgggccacctggacccatcggacagcagggcgcatcaggacaggatggagct ccgggtccccgcggctcagcgggtatagccggtctccagggtccacctggtatggttggt ccccccggcccccccggcccccagggttcaacaggagctcttggagcaaaaggccaactg ggtgatgttggagctcctggattcaagggagaggctggagtgaagggagagcgaggtgac catggtgcaccaggtcccttaggccccatgggagaagatggaaagcgtggaccccgaggt gatgctggatccatcgggcctccaggacccccaggagagacaggaccaccaggaaatagg ggtttccctggtgctgacggtttaccaggtccaaagggagcccagggcgagagagggctg ccaggatcttcaggcgccaaaggtttatctggagatccaggacgcaacggagaatcgggc ttgacaggagctcggggtctcacaggtctcataggtgcccagggagcagaggggaagcaa ggaccggtgggatccgctggagatgacggcaaacaaggcccagccggttcaactggaaac agaggcccagctggaccgatgggcctgccgggaccaaagggcttcctaggtgacgctggg aaggctggagaagctggaagtccaggagctccaggtcaaaggggaccaaatggaaaagat ggagagagaggcgccgctggtccacctggcccagctggtcctgcagggaagagaggagag cagggatctcagggagtgtttggcttccagggtttgcctggaacaccaggcccacctgga gagtcaggaaagccaggtgacaagggtcttgcaggagagattggtgaagttggcgctaca ggaccaagaggagagagaggttccccaggagaaagaggtgaaactgggcccaatgggctg cagggacccaaaggtagtccaggtgcacccggaccagatgggccaaagggtagccctgga tccaagggtgctgctggagagccaggaggtccaggacttcaggggatcccaggagaaaga ggcatacccggaccttcaggcccgaagggagatgctggcgctactggagaaaaaggacca gaaggaaaggcgggggctgatggagcgagggggcttcctggtcccattggacctgctggt cccagtggaccaaacggagtgaagggtgaaaccggcccatcgggaccaacagggcgcaga ggaacaagaggaatcgctggatctactggtgagcctggtccgactggtgctgctggcttc cctggacctcctggtcctgatggtcagcctggggtcaaaggtgaaacaggtgagccaggt ctgaagggagaagcaggatcacctggacctcagggcgtggctggaaaaccaggagaacag ggacctgttggtgtgaccgggctgaaaggtggcagaggaacaaagggtccaacgggctcc cctggttttcctggattgcctggaggagttggtccacctggtcctcttggtgcagttgga gcagacgggcctataggtgctccaggaaaacagggtccttccgggattcgaggagagaat ggaggtcagggacgtcaaggcgagcaaggacctccagggccacccggcggaactggagag aaaggagactctggagaggacggtcctcctggtcctgatgggcctccgggacctgctggc gccacagggcagcgaggaattgtcggccagcccggagtcagaggagagagaggcttgctg ggactgccaggtcctgctggtccaccaggaaaagcaggagcacctggacctcagggcagc actggtcctcctgggggtatcggtttaccaggagccactgggccaagaggagatcccgga cccgagggtattgctggagctgaggggcctcctggtaaggacggcctagttggagaaagg ggtgacaggggcaatcctggcccagagggtctggctggtggtccagggtctccaggtact gagggtccagtgggaataacaggcagtccaggtcaaatgggtgaaaacggtgaaagaggc cctcctggaccccaaggacagccaggaatacggggaaaagttggccctcaaggaccacag ggggacaaaggagctgctggagagcctggtgagaggggtcagaaaggtcacagaggattc accgggctccaaggcctgccaggaatagaaggcgccacaggagatgcaggagctatagga gttgttggaccaagtggaccgagggggcctcctggagtggtcggtcctccaggtaaggaa ggaaacattggccaccctggagctatgggtcctcctggaagcagagggagcagtggagac gtcggagcacagggcccaactggtgaaccaggaccccccggccctccaggacccccagga cctcccacctcgctttccgaagacctttttgctggcctagtcgattatgaagcacaagga attcctgaagccgtggaattcattgaggacgcttttgccgccgaacctcctctgcttccc gagttcaacaaagatgaagcccttcccaacaagaactcggccacactgcgggcagacacc ggcatccatgccacgctgaagagcctcagtggaaatctgcagaacttccgcagtcccgac ggcagcaagatgaaccctgcaaaaacctgccaggacatcaagaactgctacccacagaaa agcagcggtcagtactggattgatccaaaccaaggaagcgtaaaagatgccatcagggtc ttctgcaatatggagactggtgaaacctgcatctctgccaacccacccaacattccccgc aaagcctggtggacgaaatcaacacccaatgacaacaagcccatctggttcgaggctgac atgaatggtggcaccaggttccgctacggcaacaaggaggaacaaccaaacgcggtggcc gtgcagctgaagttgctgcagcttttgtccaaagagtcgcaccagaacatcacctaccac tgcaggaacagcgttgcttacaaagacgagaacagtgggaatctgaagaaagcgctggtc ctcagagccttcaacggtcaagaactgagagcccaaggctccaaccggctacgatatacc gtcattgaggatggctgctcgaaatcaagtgacgcatggggtcggacggtgattgagtac aggactcaaacttcaaccaggctgcctatcatggacttggcccccatggacatcggacaa gctgatcaggagtttggcctggacatcggccctgtgtgcttctcataa

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