Oreochromis niloticus (Nile tilapia): 100708274
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Entry
100708274 CDS
T06104
Symbol
zc3h18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100708274 (zc3h18)
Spliceosome [BR:
onl03041
]
Common components
Common spliceosomal components
General mRNP proteins
100708274 (zc3h18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100708274
NCBI-ProteinID:
XP_005454317
Ensembl:
ENSONIG00000004183
LinkDB
All DBs
Position
LG7:complement(38923621..38982257)
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AA seq
1146 aa
AA seq
DB search
MDTPESPTQSPQSPEEEEKGLSDSELLESPNEEEDRVISDSEILNEEGDIEVMEGHGKHV
ELEEEEDEVVPDFVSEPEDEEPFGEMGELGQDDESIVLMEGNEDSPQVVEERERKEDDER
VVSTPLSPDSEPENAKSLSAGKDGEDWKEGYDDYIKAASAECEVAEGDDQEEDYKNKDEE
DGRIRDEETRRAAVLREVKDDSVSVSRELDEHELDYDEEVPEEPGIPTHEEEDEEDTKVE
GDEDEEESEDKSSKKEKKSILPPSPKHSESRRTDGSKGPERIRQDSFRDKKKDEDDGEID
EGEIDDDDLEEGEVKDPSDRKIRPRPICRFFIKGNCTWGMNCRFIHPGVNDKGNYSLISK
PDLFSPNGAPPGGPHPLIPNNPWAAPAVEELPPPPPPVEPPVESAWERGLRHAKEVLKKA
TIRKEQEPDFEEKRFNVTIGEDEREFDKENDFFRERSYRVIRDEMDFRDPIYGDPYADPY
YDYEMEALWRGGQYENFRVQYTEAPLPYHYSQERERDRDPRERHRDRERERDHRERERRQ
REREREREREREKERMRRKEEWERDRMKRDEKERPRMRPPRDTREKKDEDKLKPRSPISL
PPNRPIEPPSKKEVVPVMRRPDEWKDPWRRSKSPRRRPALGSPPRGRRRHRPSGSSISVS
NSSRSSSRSSSYTGSGSSRSRSRSSSFSSYSSHSSQRSSFSGSRSRSQSFSTSPSPSPAA
LRNAKNKADLQPVVAKGMPLKQDAMPPPRRDRPPMKKASSPSTPSGLQSRPSKPLPDGGK
PPTNPRDAGGAGGAGGAGAGGAVKPLPPREPGKPVNLREGRRKERQQHPPRRRTMSGSIS
ESGSSYTGSSSRSRSSSNTLSRSHSGSRKSRKSRSLSVSSVSSVSSASSSSSSVRSADSD
DMYADLASPVSSASSRSPTPNHPRKERGPPRDRSPHGRDKNRERPSKKDEPFREDRRKID
QSGPPPREGNPMPRAGPGNRGGHPVHPPPGTMGPPGNYGGSSSHRDIKLTLLNKQQGDKG
NRKRYLPGDKDRPGSPLNKRMAMSPDKGRDKRIPGRLPLSPRIDRPRGRPMPPQGDRKRP
LSPPPKSSGKSPAAPSAKLVAPSPASAAGSGSSKPSNTLSRREELLKQLKAVEDAIARKR
AKIPAK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggatactcctgaaagccctacccagtcccctcagtctcctgaggaggaggaaaagggt
ctttctgacagtgagttgctggagtctcctaatgaagaggaggacagggtcatttcagac
agcgagatcctcaatgaagaaggggacatagaagtgatggaagggcatggaaaacatgtg
gaattagaggaagaggaggatgaggtggtgcctgactttgtgtcggagccagaggatgag
gaaccttttggagaaatgggagagttgggacaggatgatgagagcattgtgcttatggag
gggaatgaagacagtcctcaggtggtggaggagagggaaagaaaggaggatgatgagaga
gttgtcagcactccattatccccagactctgagccagaaaatgccaagagcctcagtgct
ggaaaagatggagaagactggaaggaaggatatgatgactacataaaagctgcctctgca
gaatgtgaggtagctgaaggggatgatcaggaggaggattacaaaaacaaagatgaagag
gatggaagaataagagatgaagagacaagaagagctgctgtgctaagggaagtgaaggat
gactctgtgtcagtttcccgggaactagacgaacatgagcttgattatgatgaggaggtc
ccagaggagcctggcatccctacgcacgaggaggaagatgaggaagacacaaaagtagag
ggagatgaagatgaggaggaaagcgaggacaaaagcagtaaaaaggagaaaaagtcaatc
cttccaccatctcctaaacacagcgaatccaggaggacagatgggtcgaaagggccggag
aggatacgccaggactccttcagagacaagaagaaggatgaggatgatggagaaattgat
gaaggagagattgatgatgatgatctggaggagggggaggtcaaagatccttcagacagg
aagatccgaccacgtcccatctgcaggtttttcattaaaggaaattgtacctggggaatg
aattgtcgctttatccaccctggagtcaatgacaaaggaaactattccctcatcagtaag
ccagacctcttctcacctaatggggcacctcctggaggaccacacccactcatacccaat
aatccttgggctgctcctgctgtggaggagctacctccaccaccacctccagtggaacct
cctgtggagagtgcctgggagagaggactgcgccatgctaaagaggtgctaaagaaggcc
accattcgtaaggagcaggagcctgactttgaggagaaacggtttaatgtgacgattgga
gaggatgaaagagagtttgacaaagaaaatgatttcttcagagaacgcagctaccgtgtt
atcagagatgaaatggacttcagagatcccatatatggtgatccatatgctgacccatac
tatgactatgaaatggaagccctgtggcgaggtggtcaatatgaaaattttagagtgcag
tacactgaagctcctcttccttaccactacagtcaggagcgtgaacgcgatcgcgaccct
cgggagcggcaccgtgatcgagagagggagcgagaccatcgcgagagggagaggcgccag
cgagaaagggagcgggagagagaaagggagcgtgagaaagagaggatgcggcggaaagaa
gaatgggagcgggaccggatgaagcgagatgagaaggaaaggccaaggatgcgtcctcct
cgagacaccagggagaagaaagatgaggacaaactgaaaccacgctctccaatcagcctt
cctccaaacaggccgattgagcccccatcaaagaaggaggttgttccagtcatgagacga
ccagatgagtggaaggacccatggcgacggtccaaatcccccaggagacgtccggcactg
ggctcgcccccacggggccgccggcgtcatcgaccatcaggctcttcgatctctgtgtcc
aactcctccaggtcctcgtcccgctcttcatcatacacaggctccggatcgtcccgttcc
cgcagccgttcctcctcattcagctcctactccagccactcgtcccaacgcagctccttc
agtggcagccgctctaggtctcagtctttctccacatctccctcaccaagtccagcagca
ctgaggaacgctaagaacaaagcagaccttcagcctgttgtagccaaaggcatgccactg
aagcaggatgccatgccccctcctcgcagggacaggcctcccatgaaaaaagcttccagc
ccttctacgccttctggactgcagtccagaccatccaaacccttgccagatggaggcaag
cctcctaccaatccccgagatgctggaggtgcaggaggtgcaggaggtgcaggagctggt
ggagccgtcaaacccctgccaccaagggaacctggaaaacctgtcaacttgagggaaggc
aggcggaaggagcgacagcagcatcctccccggaggagaactatgagtgggagtattagt
gaaagtggtagcagttatactggttccagctccagatctagatcctcatccaacaccctc
tcaaggtcacactctggatccaggaaatccagaaaatccagatcactcagtgtgagcagc
gtgtcgtctgtgtcatcagcgtcatccagcagcagctctgtacgcagcgcagactcggat
gacatgtatgccgacctggccagcccagtatcctctgccagctcacgctcacccacacca
aatcaccctcgcaaggagcgagggcctccacgcgatcggtccccacatggaagagacaag
aatagggaaagaccatcgaaaaaggatgaacccttcagagaagatcgaagaaagatcgac
cagtctggtcccccacccagagaaggaaatcccatgcccagagcagggcctggtaacagg
ggggggcacccagtacatcctccacctggcaccatgggcccccctggaaactatggcggt
tcaagttcccacagagacatcaagctcaccctccttaacaagcagcagggagacaaaggc
aacaggaagcggtacctgcctggagacaaagacaggccaggttcccccctcaacaaaaga
atggctatgtctccagacaaaggccgcgataagaggatacctggccgactcccactttct
cctcgaatagatcgacccagagggcgacccatgcccccacagggagacagaaaacgtcct
ctgtctccacctcccaaatcatctgggaaaagcccagcagctccatcggccaagctggtc
gcaccgagtccagcatcggctgccggatcgggttctagcaaacccagtaacacgctgtcc
cggcgcgaggagcttctgaaacagctgaaggctgtggaagacgccatcgcccgtaaacga
gcaaagattcctgccaaataa
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