Oreochromis niloticus (Nile tilapia): 102076835 Help Entry 102076835         CDS       T06104                                  Symbol synpo Name (RefSeq) synaptopodin isoform X1   KO K21112   synaptopodin Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl04530   Tight junction Brite KEGG Orthology (KO) [BR:onl00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     102076835 (synpo) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  102076835 NCBI-ProteinID:  XP_005468009 LinkDB All DBs Position LG2:28998343..29014400 Genome browser AA seq 1171 aa AA seqDB search MEMEKGHTSIRRGVSWSPGGLRKPFQLTQDMQTRGTDYNASWEKTGFNKEHMSRKTNLTR SASLSEKELKEARVKSQIIAAQLTVPSNSKSRGVQLFNRRKQRVNAFTLESCGERSDEDR AENVKTNPPSNKLTWAERSSEEKDRDLNLKNTTADKSVFSTPARVRSVGDIMDEPAKDFH KEEDTDDSVVQERHFLPVKEEQEEEARHQFHEDLEDEAERETPPGSKTTDVIVSVHAEGE AEINGRQTGPDPAGKLPNGCHGASGPEKVSVPTSKRASSFINRTARPFFSPPTVQSPEIV KPVMDIPPPPSYSTPPLPAFTVPQPVVASPAPPPPSYPTPPLPAFTNQPPQTYYSSPPPL SPVMSPSSPPPSHFSASQYSQMPHYGPPTAPKPSTFVPKPSGETKMTTPIKTGILEEGAA RRANKKSMFTFKEKPVVAPNPELLSLVQGADERKKHGHKSVPEPGSEEELLALGAEASNF LAKEEDRTEGARAPEWASCLKSSRTRPRAQHQPEQSLTNVSGKGAELFAKRQSRMEKYVV ENQNAGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSDMCTQLSQNLKAQQAVKQKPMK KPPPPEAVPEPPPLENGCSKIEMDLSRHRPYQLNSSLFIINPVKDPISTLPKGAPQARNQ LSTPTFSRQTSLPNNPPFNFSAQCMSPQIPLSPPGGPDYPSNPTSDQPRISSPMPAFSPD RVSSPRSSVQAPRPTFSAKKAGIAPQTSKESSPAEVPSETPTPTRTPNLTGSPGGPAAGS WTSSLQTSPPPLTSSIRSVTSPVSFRNNSRCQSPMSTQNILFSTVTSTSTSRPSQTSTAT FPRSPPWGSRCQSPVVSQSAIISPIPASQTSTSPSPLSPPWGVRCQSPMGTQNNKPSTGS SFSASKPPQSSTATSPHTPPWASRCQSPVVNTQPSTSSSVPTSRPSKTNVSTPPPWGSRC QSPLVSQKVQSSSVLVSTSRPSQSSTVTSPVSPPWGSRSQSPSHFQTSFSLSTTKPLYTS SVTSPVSLPKDSRCMSPTVNNLDSKANHRLLAKNIINAAKRKNSPSPGALSGHSLPISSL GYDGQKPPVNLFQSRSLGAQSPTFTSPPPTPTQRICSPVRLYNTRSLTDSDASVESEDSG LRSPGLHSYNTCPRGWGGSLRVKRSTISTDL NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggagatggagaagggacatacgtccatcaggagaggggtgagctggagcccagggggc ttgagaaaacctttccagttaactcaagacatgcagacccgtgggacagactacaatgca tcatgggagaagacaggattcaacaaagaacacatgagccggaaaacaaatctgaccagg agtgccagtttgtcagagaaggagctaaaggaggctcgcgtcaagagtcagatcattgct gctcagctcaccgtcccttccaactccaagtccaggggtgtgcagctctttaatcggcgt aagcagagagtcaacgccttcacacttgagagctgtggagaaaggtcagacgaggacaga gctgagaatgtgaaaacaaaccccccatccaacaaactgacatgggcagagaggagcagt gaggaaaaggacagagatctaaacttaaagaacacgaccgctgacaagtcggtcttctcg acacctgcaagagtacgctcagtgggagatatcatggatgagccggctaaggatttccac aaagaagaagacactgatgacagtgttgtacaagagagacacttcctccctgtcaaggag gagcaagaggaagaggcacgacatcaatttcatgaggatctagaggatgaggccgagcgt gagactccgccagggagtaaaaccactgatgtgatagtgtcagtacatgctgaaggagaa gcagagataaatgggaggcaaacagggccagatcctgctggaaagcttcctaatggctgt catggtgcctctggtcctgagaaggtgtctgtgcccacatctaagcgggcaagctccttc atcaatagaactgccagacctttcttctctccgcccacagtgcagtctccggagatcgtc aagcctgtcatggacatcccccctcctccttcctactccacacctcctctccctgctttt actgtcccccagcctgtggtggcctcacctgctcctccgcctccgtcatatcccacacca cctctaccagcttttacaaaccagcccccacagacttactactccagtccacctccactg tctcctgtcatgtctccttcttctcctccgccatcccatttctctgcttcccagtattca caaatgccccattatggccctcccacagccccaaaaccctccacttttgttcctaagcca tctggggagacgaagatgacaacaccaatcaaaacaggaatacttgaggagggtgctgcc aggagggcaaataaaaagtcaatgttcacattcaaagagaaaccggtggttgctccaaac cccgagctactttctctagtgcaaggggcggatgaaagaaagaagcatggacacaaatct gtccctgagccaggatctgaagaagagttactggctctgggtgcagaagcctccaacttc ctcgccaaggaagaggacaggacagagggagcaagagctccagaatgggcctcctgtctc aagagctcaaggacccgaccgagggcacagcaccaaccggagcagtcgcttacaaatgtg tccggaaaaggtgctgaactgtttgctaagcgtcagtccaggatggaaaaatatgtggtt gagaatcagaacgcaggccaaattagatctccttctcccacaatgtctctgccaccatct tgggtttacccatcaaacatgcctggtagggtcaaagctatcgctaaaaactctgacatg tgcactcaactttcacaaaatctcaaggcgcaacaagcagtcaagcagaaaccaatgaaa aaacctccaccaccagaggcagttccagagccgccacctttggaaaatggttgctccaag atagagatggatctgtcgagacaccggccataccagcttaactcttctctcttcatcatt aacccagtcaaggaccccatcagtaccctacccaaaggagcaccacaggccaggaaccag ctctccactccaactttctccagacagacttccctccctaacaatcctccctttaacttt agtgcccaatgcatgtctcctcaaatacctctcagccctccaggaggaccagattatcct tcaaatccgacatctgatcagccgaggatcagctctccgatgcctgctttttctccagac agggtgtcctctccccggtcatcagtacaggcaccaaggcccacattttctgccaaaaag gcagggattgcaccgcagacatcaaaggagtccagtcctgctgaagttcccagtgagaca cctacaccaaccaggacacctaacctcacaggcagcccgggcggcccagctgctggaagc tggacttctagcctccaaacaagcccaccgcccctcactagctccatccgttcagtcacg tcccctgtatcgtttcgtaataattcaagatgccaatcgcctatgagcactcagaatatc ctgttttctacagttacctccacttccacatccagaccctcacaaacatccacagccacc tttccacgctctcctccttggggttcaaggtgtcagtccccagtggtcagccagtccgct atcatttccccgattcctgcttcccaaacttctacatctccttctcccctttctcctcct tggggtgtaaggtgccaatccccaatggggacccagaacaacaagccctccactggttcc tcattttctgcatctaaacctccccaatcatctacagcgacttcaccacacacacctccc tgggcatctagatgccaatccccagtggtgaatacccagccttccactagctcctcagtt cctacatccagaccttccaaaacaaatgtatccacacctcctccttggggatcaagatgc caatcaccattagtaagccagaaggtccagtcctctagcgtcttagtttccacatccaga ccatcccagtcatccacagtcacatctcctgtctctcctccatggggctcacgttctcag tctccttcacactttcaaaccagtttttctctctctaccactaaacctctgtacacatcc tccgtcacctctcctgtttccttgcccaaagacagtcgctgcatgtctcccacagttaac aacttggactctaaagccaaccatcgtctgctggccaaaaatatcatcaacgcagccaaa cgtaaaaacagcccttctcctggtgcactaagcggtcacagtcttcccatctcatctctg ggctacgatggtcaaaaaccacccgtcaacctcttccagtcacggtcactgggggcacag tcccctactttcaccagccctcccccaactccaactcagagaatctgttctcctgtgcgt ctctacaacactcgctccctgaccgactccgacgcctctgttgaatccgaagactcaggc ctccgctcgcccggcctccactcctacaacacttgtccccgcggctggggcggcagcctg agggtgaaacgaagcaccatctccactgacctgtga

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