Oreochromis niloticus (Nile tilapia): 102080987
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Entry
102080987 CDS
T06104
Symbol
atn1
Name
(RefSeq) LOW QUALITY PROTEIN: atrophin-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
102080987
NCBI-ProteinID:
XP_019220229
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All DBs
Position
LG11:23346859..23355869
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AA seq
1201 aa
AA seq
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MGGPNSIQGRDFGALSVSQNREFQGSGRDGPNLGPERRDFAPAFRDREREREREGGREFN
LPNQNQSRDFGPSGASGGHPRDKDGSRWGEFGGQTRDVVGSSNPNNNSIPQGNPPSSTSG
LPVTPMLNRDPPASPQNNPSHPTHPSLPPHPHPHPPNSSNRDLPPPIDQAQTPSSGADHF
HREYPPTGGKDFPAGAPPSTGTNREYLNSPGVTPNLGREYSGPGGTQHPHPPHPHYQSGP
RDRERDSNLRDTSLYQNRGGPSQPPALSPSSSSSHHGHPLNAPYPPPPPQPPLPPPQSSH
TQPPPSGMAPNVRPPHYQSSAQTPPTPLSPLPSPSTNQMGAFSSFPPGSSSAASMPLPAT
GVSSSCSPGCRPSPYHSTLNNHPPFSGSYHSNGNNSSTMANSSSSSNSSAPNSSNTNPQS
LSPQNVSKGPPPLSNSASSNNNGISTPASSSSLPGGDGHSDSGPPPTPVIKEEPIEDREE
SESPPPVLRSPSPEPKAVDIPIHASQSARFHKVLDRGSGNSCARSDVLFVPLDGSKLWKK
RNEMIERARREVEQRARDLREKERERERERERERELDRHLQQQKDASAAGGGRQGSSLFF
PSSSSIILDPSSSSASSSGNPVSHPPPHPQHHHSHPHAHLPPTHHLHPTLSHSIPHSLLL
PSMGGSPAVVGGPQGALGIGLGGPYLGPDTPALRTLSEYARPHAMSPLGVASRAPAHHPQ
VHHGHPHVHPSFFLPQFQNHALGHPHHLPTDAATAAAILGFLYGGSLEGGPGVGGHPGMA
GGPVPGGIGGAGLGGVGFPHAVAAHRDRIKPGFEFKSDDRVYPPGSIPDPAVLAHSHSHA
HASAHAHAHSLLLGGSAAGSNEVSIYGTPPPPAPLGPPHLQNPTLAPVTRAPNPPAPQSL
SNPPPSSLLPPTLPSHPSSAPPAPPAASAAPPPAPPQPAPPTSNATSLHHPVPHSSFLSS
LSSHQPPALPRPLPLRPTPLPLALLPLTSENGVEKESGRGRGTEQLCRPLGTESEKERGR
EKGEEVLEAEEEEAEEGGGSGASTGGGGGGENLGRLQMLNVTPHHHQHSHIHSHLHLHQQ
DTAAGGVHPLMDPLASGSPLARLPYPGATLGTPILAHPLTDSEVLRQQLFGAPFRDLPQP
SSLTGPMSAAHQLQAMQQAQSAELQIQRLALEQQWIHHHHHHSLTQDEYYSHLKKESDKT
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcccaatagcatccaaggcagagactttggagcgctgtcagtcagtcagaac
cgggaattccaaggttctgggagagatggacctaacttggggccagaaagaagagacttt
gctccggctttcagagacagggagcgtgaaagggagcgtgaaggaggaagggagtttaat
ctgccaaaccaaaaccagagtagagactttggccccagtggagccagcggggggcatccc
agagacaaagatgggagcagatggggtgagtttgggggccagacgagagacgttgtgggc
agtagtaaccctaacaacaactccatcccacagggaaaccccccaagttcaaccagcggg
ctacctgtcacccccatgctgaaccgtgacccacctgcgtctccccaaaacaatcccagt
caccctacccatccttccctgccgccacacccccacccacatcccccaaactcatcgaac
cgggacttacctcctcccatcgaccaggcacaaacgccctcctctggggcggatcacttt
cacagggagtatccacccactggaggaaaagactttcctgctggtgcgcctccttccact
ggcacaaatcgggagtacctaaactcccctggagtaactccaaacctgggacgagagtat
tcagggcccgggggaacgcagcacccccacccacctcatccccactaccagtctgggcca
agagacagagagagagactcaaatctgcgagacacttctctataccaaaaccgtggaggc
ccaagtcaaccccctgcactctctccttcctcctcttctagccatcacggacaccctttg
aatgctccttatccccctccaccacctcagcctcctctgcccccacctcaatcctcccac
acccaaccacccccctcaggaatggcacccaatgtacgtcctccacactaccagtcttct
gcccagactcctccgacacccctttctcctttacccagcccatcgaccaatcagatggga
gctttctcatcttttcctcctggctcctcctctgcagccagcatgccgcttccagcgaca
ggtgtgtcatccagctgttcgcctggatgccgcccttccccttatcatagcactttgaac
aaccaccctcctttcagtggatcttaccactctaacggaaacaacagcagtactatggcc
aacagcagcagcagcagcaacagtagcgcacccaacagcagcaataccaatccacagtca
ctctcgcctcagaatgtctcaaaaggacctccacctcttagtaactccgccagcagcaac
aacaatggtatctctacacctgcctccagttcttcgctccctggtggagacggacattcg
gattcaggcccgcctcctacaccggtcattaaggaagaaccaatagaagacagggaagag
agtgaaagcccaccacctgtgctgagaagcccctcgcctgaaccaaaagctgtagacatt
cctatccacgccagccagtcagcacggtttcacaaggtcctcgaccgcggcagtgggaac
tcctgcgcccgcagcgatgtcctctttgtcccactcgatggctccaaactgtggaagaag
aggaatgagatgattgaaagggcccgcagggaggtggagcagcgggccagagacctgcga
gagaaagaaagggaacgagagagggagcgggaacgtgagagggagctcgatcggcatcta
cagcagcagaaggacgccagcgctgctggaggaggtcgccagggctcctcactcttcttc
ccttcctcatcctcgatcatcctcgatccttcgtcttcttccgcttcttcctcgggcaac
cccgtctcccatcctcccccacatccacaacatcatcactcacatcctcatgctcacctt
cctccgacacaccatctccaccctaccctctcccactctatcccccactccctcctctta
ccatccatgggtgggtcaccagcagtggttggcggccctcagggggccctgggaataggt
ttaggaggaccatatttaggccctgacaccccagcgctgagaactctgagtgaatatgct
cgcccccacgctatgtctccacttggggtggcaagtcgtgccccggcacaccacccacaa
gttcatcatggtcatccccacgtccacccctcattctttcttcctcagtttcagaatcat
gctttaggtcacccacaccacttgcccactgatgcagctactgcagcagccatcttggga
tttttgtatggtggcagcctggaaggtggtccaggtgttggtggtcacccgggaatggca
gggggcccagtacctggagggattgggggtgcaggattgggaggtgtcggctttcctcat
gcagtggctgcacaccgagatcggataaagccaggatttgagtttaagagtgatgaccgg
gtttacccaccagggtctatacctgatcctgcagttcttgctcactcacattcacatgct
catgccagtgcccatgcgcatgcacactccctgctccttggaggcagtgcagcgggcagt
aatgaggtatcaatctacggcactccgcctccaccagctccacttggcccacctcacctc
cagaacccaactctggcccctgtaactcgagctcccaaccctcctgctccgcagtccctg
tcgaatccacccccttcatctctgctcccacccacactcccctctcacccttcatctgct
cccccggctcccccagctgcctctgccgctcctcccccggctcctcctcaacctgcccca
ccgacctccaacgccacctcacttcaccaccctgtcccccattcttcctttctcagctcc
ctgtcctctcatcagccaccagccctgccccggccgctgcccctgagacctaccccactc
ccactcgctctcctgcctcttacgagcgagaacggagtggagaaagagagcgggagaggg
agagggacagagcagctctgccggcctttggggacagagagcgagaaagagagagggaga
gagaaaggggaggaagtgttggaggcggaggaggaggaagcggaggagggagggggaagt
ggagccagtacaggtggaggaggtggaggagagaatctggggcgtcttcagatgctaaat
gtgacgcctcatcatcaccagcattcacacatccactcacatcttcacctacaccagcaa
gacacagcggcgggcggggttcaccccctgatggacccgttggcatcggggtctccattg
gcacgcctcccttacccaggagccacactaggcacccctatcctggcacaccccctcact
gacagcgaggtgctccgccaacagctgttcggtgctcctttccgtgacttgccccagcct
tcctctctcaccggccccatgtctgcagcccatcagctccaggccatgcagcaggcacag
agcgcagagctgcagatccagagactggccctggaacagcagtggattcatcaccatcac
caccactccctcacccaggatgagtattacagtcacctgaagaaagagagcgacaagacc
ctgtga
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