Otariodibacter oris: A6A10_07390
Help
Entry
A6A10_07390 CDS
T06287
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ooi
Otariodibacter oris
Pathway
ooi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6A10_07390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ooi03400
]
A6A10_07390
Enzymes [BR:
ooi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A6A10_07390
DNA repair and recombination proteins [BR:
ooi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6A10_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_12
AAA_18
AAA_30
AAA_25
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
QGM81713
LinkDB
All DBs
Position
complement(1600066..1603710)
Genome browser
AA seq
1214 aa
AA seq
DB search
MQTLNPISLPLDRSVLIEASAGTGKTYTMANLYLRLLLGIDCVPLQVEQILVVTFTKAAT
QELRDRIRQKLSDVMRYFQDPDSKEAVRAFEKAPFLREVYQQVEDNLEHALLRLKLAERD
MDLASIFTIDSFCQKMLFQFAFDSGIRFDVNLQTDETELLDRLSEESWRELFYSVGVVEA
KWISDTLSNPSNALNKVRSYLSGDIPPLAPEQEKWLNEDYRQSLLEFEHFSKTSCAYWLE
NYEAIISPIQQAFDKQNEENIKILNGVSYKEKSFQNTWLPTINRWANSENQFFPAKELSY
FGQSLLEQKASKGAEVLRSEHFVKIDDFLAEYEQKFVNLAQEIESKLRYHFFLHLRQKLI
EYKDHHAEKNFQDMLIYLYQALKGDNGKVLAEKIRQQYGFAMIDESQDTDQVQYEIFRRI
FIDEQENQGFIMIGDPKQSIYKFRGADIFSYLDASKKVSGTFTLSKNWRSLPNVVEFVNK
IFTFPDSVEASPFLYEDIGFNPTAFKETETKLENQEEVNIYLLREAYERGHYQSDLAAQH
CADQIQQQLHNAEQGNLFVSEEKEEFDADGNVQSILVERTLVPKDIAILVRSHDEAKKVK
QALSERDIQSVFLSEKESVYQTQEALDIIAILEACLNPYQQRAILSALGSELWGLTADEI
YQIKNNEKLWEYYVELFSRSRLIWQTQGILPMLHNLFLTEQIIQRINQTDDADRRVTNIL
HLAELLQEKMEVTENESALLRWFSQQIEQPTGSDEQILRLESEENLIKIITIHKSKGLEY
PVVWLPFLGKKSQGFSGKGMSIYRQEDNQIAWDLLGDDEDIKALQNKAEYAEDLRLLYVA
LTRAKYQLHVILPEKWSANWNAMHYLLTDGLPQKDTDTAVCLEKKSIAYRKVLLDSEPET
TKFSPSSAQDIQIPKVKTFEHKIKQTHQVTSFTALHSQHSYLLQKNDGILPLAVNDEALD
YDKTAQESVDVEQDNDEFIEYSPYRFPHSTKVGNILHRFLELCDFTQPIDEDKVLSVCEQ
LGLSEEWVEPTIAWFNAILATPFGEQPFALNQIGSHKRLNEWQFYLRLSNEKALSKLNHL
LKKYSPLAKNAPDLQLFQLEGFVRGFVDCFIEVDGKFYIIDYKSNYLGHLPQDYQLENIE
KKMIQYRYDLQYILYTLAAHRYLKSRLGDNYHYAQHFGGVAYLFLRGMDGTPQSGVFFEK
PSEHLIEEMDALFA
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactctcaaccctatttctctccctcttgatcgttcagtattgatcgaagcttcc
gctggtacaggtaaaacctacaccatggcaaatctttatttgcgtttgttgttagggatt
gattgtgtgcctttgcaagttgagcagattttagtggtaacctttaccaaagctgcaact
caggaattgagggataggattagacagaaattgtctgatgtgatgcgttattttcaggat
cctgattcaaaagaagcagttcgagcatttgaaaaagctccgttcttgcgagaagtttat
caacaagtggaagataatttagaacacgctttgttgcgtttaaaattagctgaacgtgat
atggatttggcaagtatttttactattgatagtttttgtcagaaaatgttattccaattt
gcgttcgattcaggcattcgctttgacgttaatttgcagactgatgaaactgagttactc
gatcgccttagcgaagaaagttggcgagagttgttctattctgtgggtgtggtagaggct
aaatggatttctgatactttatctaatccaagtaatgcactcaataaagtgcgttcgtat
ttgtcgggcgatattccgcctttagctccggaacaagaaaaatggttgaatgaggattat
cgacaatcattattagaatttgaacatttctcaaaaacctcttgtgcatattggctagaa
aattatgaggctatcatttctcctattcagcaagcttttgataagcaaaatgaagaaaat
ataaaaatattgaatggagtaagttataaagaaaaatcttttcaaaatacatggctacca
actattaatcgttgggctaatagcgaaaatcaatttttccctgctaaagagttaagttat
tttggacaatcattacttgagcaaaaagcaagtaaaggagcagaggttcttcgcagtgag
cattttgttaaaattgatgattttctcgcggaatatgaacagaaatttgttaatttagcc
caagaaattgaaagcaaacttcgttaccattttttcctgcatttacgtcaaaaattaatc
gaatataaagatcatcacgcagagaagaattttcaggatatgctgatttatctctatcaa
gcgttgaaaggggataatggtaaagttttagcggagaaaattcgtcagcaatatggcttt
gcaatgattgatgagtcacaagataccgatcaagttcagtacgaaatctttagacgaatt
tttatagatgaacaggaaaaccaagggtttattatgattggtgatcctaaacagtcgatc
tataaattccgtggtgctgatattttttcttatttagatgcctcaaaaaaagtgtccggc
acttttacgttatcaaaaaactggcgttctttacctaatgtggttgagtttgtgaataaa
atcttcacttttcctgattccgtggaagcgagtccttttttgtatgaagatattggtttc
aatccaacagcgtttaaagaaactgagaccaaattagagaatcaagaagaagtaaatatt
tatttacttcgagaggcttatgagagagggcattatcaatcggatcttgcggcgcaacat
tgtgctgatcaaattcagcagcaattacataatgcagagcaaggtaatttattcgtttca
gaagaaaaagaagagtttgatgcagatggtaatgtgcaatccatattagttgaaaggaca
ttggtaccaaaagatatcgcaattttggtgcgatctcatgatgaagcgaagaaagtaaaa
caagccttatcggaacgcgatattcagtcagtatttttatctgaaaaggaaagcgtttat
cagactcaagaagcattagacataatcgcaattttagaagcctgtttaaacccttatcaa
caaagggcgattctttctgctcttggttcagaattatgggggctaacggctgatgagatc
tatcaaattaaaaataatgaaaaattatgggaatattacgttgagctatttagtcgctct
cgtcttatttggcaaactcaagggattttgccaatgttgcataatttgtttttaacagaa
cagattattcaacgtattaaccaaacagatgatgctgatcgtcgggttacgaatattctg
cacttggcggaattgctacaagaaaagatggaagtgacagaaaatgaatcagcattatta
cgctggttttctcaacaaattgaacagccaacgggaagtgatgagcagattttacgttta
gaaagtgaagaaaatctcattaagattattacaatccataagtctaaagggctcgaatat
cctgttgtttggttgccatttttgggtaaaaaaagccaaggtttttcaggcaaaggaatg
tctatttatcgtcaagaagataatcaaattgcgtgggatttattgggggatgatgaggac
attaaggcattacaaaataaagcggaatatgcggaagatttacgcctgctgtacgtggca
ttgactcgagcgaaataccaactgcatgtgatcctaccagaaaaatggtcggcgaattgg
aatgccatgcactatttattgactgatggattgcctcaaaaggatactgacacagcggtg
tgcttagagaaaaaaagcatagcatatcgtaaagtattattggattcagagccagaaacc
accaagttttcgccatcatctgctcaagatattcagattccaaaagttaaaacgtttgag
cataaaattaaacaaactcatcaagtcacgagttttactgcattacattcacaacatagt
tatttattgcaaaaaaatgatgggatcttaccgcttgctgtgaatgatgaggcattggac
tatgataaaacggctcaagaaagcgttgatgttgagcaagataacgacgagtttattgaa
tatagcccttatcgattcccacatagcacgaaagtggggaatatattgcatcgcttttta
gagttgtgtgatttcactcaacctattgatgaagataaagtactttcagtgtgtgagcaa
cttggcttatcggaagagtgggtagagccgacgattgcgtggtttaacgcaatattagcc
acaccttttggggagcaaccttttgcattaaatcagattggatcacataagcgtttaaat
gaatggcaattctatttacgtttgagtaatgaaaaagcattatctaagttaaatcatttg
ttgaaaaaatacagtccacttgctaaaaatgcacccgatttacaacttttccaattagaa
ggttttgtgcgtggtttcgtcgattgctttattgaagtggacggtaaattttatatcatt
gactataaatcaaactatttagggcatttgccacaagattatcaattagaaaatattgaa
aaaaagatgattcaatatcgttatgatctacaatatatcctttataccttggcagctcat
cgttatttaaaatctcgtttaggggataattatcactatgcacaacattttggcggggtg
gcttatctctttttaagaggcatggatggtacaccacaaagtggggtattttttgagaaa
ccaagtgaacatttgattgaagaaatggatgcgttattcgcatga
DBGET
integrated database retrieval system
