Orcinus orca (killer whale): 101269492
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Entry
101269492 CDS
T05247
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101269492 (SOX3)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101269492 (SOX3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101269492
NCBI-ProteinID:
XP_004278755
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Position
X:complement(120966675..120968824)
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AA seq
448 aa
AA seq
DB search
MRPARDNASGASSLQVPADLALSTSARLPFLPDPLAHRPPSAPPTESPGLFTVAAPAPGA
PSPPATLAHLLPAQAMYSLLETELKNPAGPPTPAAGAGGPAAPGGAGKTTANAGGGANAG
GGSGGGASGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGAD
WKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAA
AAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPATMSSPPPPPALP
QMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAAASGYGGMAPSAAAAAAAYGQQPATAAA
AAAAAAMSLGPMGTVVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPL
PGGRLHSVHQHYQGAGTAVNGTVPLTHI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagcccgagacaacgcatcaggtgcgagtagcctgcaggttcccgctgatttg
gcgctgagcacttcggcaagactgcccttcctgcccgacccactggcccaccggccccca
agcgcccctccgacggagtccccaggccttttcaccgtggccgctccagccccgggagcg
ccttctcctcccgccaccctggcgcaccttcttcccgcccaggccatgtacagcctgctg
gagactgaactcaagaaccccgcggggccacccaccccagctgcaggcgcgggcggcccc
gcagccccgggcggtgcaggcaagactaccgcgaacgcaggcggcggcgcgaacgcaggc
ggcggcagcggcggtggcgcgagcggcggcggcggcggcggtggcgggggcagtgaccag
gaccgggtgaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgcaag
atggctctggagaaccccaagatgcacaactctgagatcagcaagcgcttgggcgccgac
tggaaactgctgaccgatgccgagaagcggccgttcatcgacgaggccaagcggctgcgc
gccgtgcacatgaaagaatacccggactacaagtaccggccgcgccgcaagaccaagacg
ctgctcaagaaggacaagtactccctgcccggcggcctgctgccccccggagccgcggcc
gccgccgccgccgctgccgccgccgccgccgctagcagcccggtgggcgtgggccagcgc
ctggacacgtacacacacgtgaacggctgggccaacggcgcgtactccctggtgcaggag
cagctgggctacgcgcagcccgcgaccatgagcagcccgccgccgccgcccgcgctgccg
cagatgcaccgctacgacatggccggcctgcagtacagccccatgatgccgcccggcgcc
cagagctacatgaacgccgccgccgccgccgcggctgccgcctcgggctacgggggcatg
gcgccctccgccgccgccgccgccgccgcctacgggcagcagccagccaccgccgccgcc
gccgcggccgccgccgccatgagcctgggccccatgggcacggtggtgaagaccgagccc
agctcgccgccgcccgccatcgcgtcgcactcgcagcgcgcgtgcctcggcgacctgcgc
gacatgatcagcatgtacctgccgcccggcggggacgcggctgacgccgcctcgccgctg
ccgggcggccgcctgcacagcgtgcaccagcactaccagggcgccgggactgccgtcaac
ggaacggtgccgctgacccacatctga
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