Orcinus orca (killer whale): 101270978
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Entry
101270978 CDS
T05247
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04151
PI3K-Akt signaling pathway
oor04510
Focal adhesion
oor04512
ECM-receptor interaction
oor04820
Cytoskeleton in muscle cells
oor04926
Relaxin signaling pathway
oor04933
AGE-RAGE signaling pathway in diabetic complications
oor04974
Protein digestion and absorption
oor05146
Amoebiasis
oor05165
Human papillomavirus infection
oor05200
Pathways in cancer
oor05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101270978 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101270978 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101270978 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101270978 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101270978 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
101270978 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101270978 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
101270978 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101270978 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
101270978 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101270978 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oor04147
]
101270978 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
oor00536
]
101270978 (COL4A3)
Exosome [BR:
oor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101270978 (COL4A3)
Glycosaminoglycan binding proteins [BR:
oor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101270978 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101270978
NCBI-ProteinID:
XP_004262681
LinkDB
All DBs
Position
7:109272770..109407636
Genome browser
AA seq
1670 aa
AA seq
DB search
MRPGTAPRPPALLLLLQLVLLVAAPTAGKGCVCKDKGQCFCDGTKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKGSPGLPGFTGPKGVRGTTGLPGFSGPPGLPGIPGHPGPYGPV
GLPGCNGSKGEQGFPGLRGTPGYPGIPGAVGLKGEKGAPAEGEGVALDGKGDPGLPGAPG
FQGLPGLPGFPGPIGPPGPPGFFGFPGTMGPPGPKGHMGDNVIGQKGERGMKGLIGPPGP
PGTVIVTLTGLVNRTDLKGEKGDQGAMGQSGRPGPSGPPGESYGSEKGAPGEPGPQGKPG
KDGAPGFPGTEGAKGSKGFPGLRGEDGIKGWKGDMGPPGFRGPTEYYDAYQEKGDEGIPG
PPGPQGAPGPQGPSGPPGAPGSPGSSRPGLQGAPGVPGAKGSKGERGPPGKSAVGLPGSP
GCPGSPGPTGLPGPPGPPGGIVLRRGPPGDGGPPGHTGSPGIPGVDGPKGEPGLLCTQCP
CVPGPPGPPGLPGLDGVKGFPGRQGAAGIKGIPGSPGSAGLPGFPGLPGDQGHPGLKGEK
GEASQPERQVGAPGDPGLRGHPGRKGLDGIPGTPGVKGLPGPKGEPALRGEKGDQGLPGD
PGIPGSPGPAGPAGPSDYGPWGEPGPKGTQGLPGAPGPPGEAGPKGEIGVLTPVPGPPGP
PGAPGRAGPQGPPGIPGSTGKCDLGLPGPDGEPGIPGIGFPGPPGPKGDRGFPGTKGSPG
CPGEMGKPGLPGKPGLPGVKGEPGLAMPGEPGAPGLPGERGNSGEKGESGLPGLPGLPGI
PGTGGLDGPRGDPGQPGPPGERGPPGRCKESLSGAQGLPGLNGLKGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEMGPPGTKGYPGNPGFLGPPGEKGTIGMMGVPGNIG
PPGPPGKPGTLGQRGSFGIPGVKGERGAPGAKGEQGDKGIPGPPGILRLVGDKGEPGLKG
LAGKPGEKGNRGIPGLPGFKGLQGPPGPPGSPDSRGDPGSIGNPGEPGPRGVPGSMGNMG
VPGTKGMKGTMGFPGLAGRPGLPGTHGPQGDKGEPGYSEGTRPGPPGPKGDPGLPGDMGK
KGGRGPPGTPGCSGPAAPEGVPGSPGSPGHPGKPGPDGDLGSKGIKGFPGSPGIKGPPGP
PGFPGNPGPAGERGNQGRDGIPGPAGEKGETGLLGALPGPRGKPGPQGAKGDRGAPGLPG
LPGRKGPVGDAGPRGPIGMTGPQGPPGFPGSIIPGQKGDRGPPGRRGNPGEPGPPGPKGG
PVEGIKGDKGFMGQPGPRGPPGTVGDMGPPGHPGVPGAPGLPGVRGDPGFYGFPGMKGEK
GNSGFLGPSGPPGRIGPKGPPGVRGDPGTVKIISLPGSPGPPGPAGEPGMQGEPGPPGLP
GNPGPCGPRGKPGKDGLPGTPGPIGEKGNKGCKGEQGPPGSDGLPGLKGKPGDTGPPARG
TTMRGFVFTRHSQTTVIPSCPEGTEPLYSGFSLLFVQGNEQSHGQDLGTHGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPALMPVDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPSCPPGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLDPRRMFRKPIPSTVKAGELEKIISRCQVCMKRRH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgggacggcgccgaggccgccggcgctgctgcttctgcttcagctggtgctc
ctggtggccgcgcccactgccggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatgggaccaaaggggagaagggggagaaaggctttcccggaccccctgggcctccc
ggccagaaaggatacccaggtccggaaggcctgcctggaccacagggacccaagggctct
ccaggacttccaggattcactggtcccaaaggcgtgaggggaacaactggattaccagga
ttttcaggtcctcctggacttccaggcatcccaggccatcctggaccgtatggacctgtc
ggtttgccaggatgcaatggttctaagggtgagcaagggtttccaggacttcgggggaca
ccaggctacccaggcatcccgggtgccgttggtttgaaaggagagaaaggggctcctgct
gaaggagaaggtgtagcccttgatggaaaaggtgaccctgggttgccaggagctccagga
ttccagggtttgccaggccttccaggttttcctggacctattggtccccctggccctcca
ggattctttggctttccaggaaccatgggacctccaggacctaagggtcacatgggcgat
aacgtgataggacaaaaaggagagcggggtatgaaaggattaataggaccgccgggacca
ccaggaacagttatcgtgacactaaccggcctggttaacagaacggacctcaagggggag
aagggagaccagggagccatgggccagtctggacgccctggaccctcagggccacctgga
gaatcttacggatcagaaaaaggtgctcctggagaaccaggcccgcagggaaagcctgga
aaagatggtgcccccggtttccctggcactgagggagccaaaggcagcaagggtttccct
gggttaaggggcgaagatggcatcaaggggtggaaaggagacatgggccctccaggattt
cgtggtccaacagaatattatgatgcgtaccaggaaaagggagatgaaggaattccaggc
ccaccagggccccagggagctcctggcccacagggtcccagtggtccccctggagcccct
ggaagtcctgggtcatcaaggcctggcctccaaggagcccctggagtaccaggagcaaaa
ggaagtaaaggcgagcgaggacccccaggaaagagcgcagtggggcttcccgggtcccct
ggctgtcctggttcaccaggccctacagggttgccagggcctccaggaccaccaggtggt
attgttcttcgcagaggtccccctggagatggtggacctccaggccatacagggtctcca
ggaatcccaggagtcgatgggcccaaaggggagccaggccttttgtgcacacagtgtcct
tgtgtcccgggacctccaggccccccaggattgccggggttagatggcgtaaaaggattc
ccaggaagacaaggggcagctggcattaaaggaatcccagggtccccaggaagcgctggt
cttccaggatttccgggattgccgggtgatcagggtcatccaggacttaaaggagaaaaa
ggtgaagcatctcagccagagagacaagtgggtgccccaggggatccagggctccgagga
catcctggaagaaagggcttggatggaattcctggaactccgggagtaaaaggattacca
ggacctaagggagaaccggccctgaggggggagaagggagaccagggtcttccaggggat
cctggcatccctgggtccccaggacctgcaggaccggctggaccatcagactatggacct
tggggagagcctggtccaaagggcacccaaggacttcctggagcccctggaccacctgga
gaagccggtcctaagggagaaatcggtgttttgacaccagttccagggcccccaggacct
cctggagccccaggccgtgctggcccccaaggtccacctggtatccctggatccacagga
aaatgtgatctgggtcttcctgggcccgatggtgaaccaggaattccaggaatcggattc
cctgggcctcctggacctaagggagaccgaggttttccaggaacaaaaggatcaccaggc
tgtcctggagaaatgggaaagccagggttacctggaaagccaggcctcccaggagtcaag
ggagaaccaggactagccatgcctggagagccaggagcaccaggtttgccaggagaaaga
ggcaactctggggaaaagggagaaagtggactccctggacttccaggtctccctggaatt
ccaggaactggagggcttgatggaccacgaggggatccagggcagcctggaccacctgga
gaaagaggccccccaggaaggtgcaaagaaagtctcagtggagctcaaggacttccaggc
ttaaatggattgaaagggcaacaaggcagaagaggcgaaacggggccaaagggagaccca
ggtattccaggcttggataggtcaggatttcctggagaacctggaccaccaggaatgccg
ggtcatcgaggggagatgggaccacctggtacaaaaggatatccaggaaatccaggattt
ttagggccaccaggtgaaaaaggaacgattgggatgatgggggttcccggaaacattggc
cctccggggcctcctgggaagccaggcaccctgggacagagggggagctttggaattcca
ggagtaaaaggcgagagaggagccccaggtgccaaaggggaacaaggagataaaggaatt
ccagggcctcctggaatattacgcttagtcggggacaaaggggaaccaggactcaaagga
cttgcagggaagcctggtgagaaaggaaacagaggcattccaggattaccaggtttcaaa
ggactccaagggccacctggaccaccaggatcaccagactccagaggagatccaggcagc
attgggaatcctggtgagccaggaccacgtggtgtgccaggaagcatgggaaacatgggg
gtgccaggtactaaaggaatgaagggaactatgggattcccaggtctagctggaagacca
ggcctcccaggtactcatggtccccaaggagataagggagagccaggttattcagaaggt
acaaggccaggaccaccaggaccaaagggagatccaggattgccaggtgacatgggaaag
aaaggaggtagagggccacctggcacacctggatgttcgggccctgctgcaccagaggga
gttcctgggagtcccggaagccctggccacccaggaaagcccggtcctgatggtgatttg
gggtctaaaggaatcaaaggtttccctggctctccaggaataaaaggccctccaggccct
ccaggattcccaggaaatcctggaccagcgggtgagagaggtaatcaaggacgtgatgga
attcctggtccagctggagaaaaaggagaaacaggtttgctgggagcacttccaggccca
agagggaaacctggtcctcaaggagccaaaggagacaggggagccccaggcttgccgggc
ctccctggcaggaaagggccagtgggagatgctgggcctcgagggcccattggcatgaca
ggacctcaagggccaccaggctttcctggttcaatcatccctggccaaaaaggagatcga
ggtccacctggcagaagaggaaacccaggtgagcctggtccccctggacctaaagggggt
cccgtagaaggcataaaaggagacaagggatttatgggccaacctggcccaagaggtccg
cctggaactgtaggagacatggggccaccaggtcatccgggagtaccaggtgccccaggt
ctgccaggggtcagaggtgatcctggattctatggatttccgggcatgaaaggggagaag
ggtaattcaggatttctgggaccaagtggacctccagggcgaattgggccaaaaggacca
cctggtgtacgtggagaccctggcacagtgaagatcatctcccttccaggaagcccaggc
ccacctggcccagctggagaaccagggatgcaaggagaacctgggcccccggggctaccg
ggaaacccaggaccctgtgggccaagaggtaaaccaggcaaggatggactaccaggaacc
cctggaccaattggagaaaaaggcaacaaaggttgtaaaggagagcaaggaccgcctgga
tccgatggcctgccaggcttgaaggggaaacctggagacactggaccacctgcaaggggg
acaacgatgaggggctttgtcttcacccggcacagccagaccacggtgattccctcctgt
ccggaagggacagaaccactctatagtgggttttctcttctctttgtacaaggaaatgaa
caatcccatggacaggaccttggaactcatggcagctgcctgcagagatttactacgatg
ccattcttattctgcaatatcaatgatgtatgtaatttcgcatctcgaaacgattattca
tactggctgtcaacaccagctctgatgccagtggacatggctccaattactggccgggcc
ctggagccttatattagcagatgcactgtctgtgaaggtcctgcgattgccatagctgtt
cacagccaaactactgatatcccctcatgtcctcctggctggatttctctctggaaagga
ttttctttcatcatgttcacaagtgcaggttcagagggcgctgggcaggcactggcatcc
cctggctcctgcttagaagaattccgagccagtccatttatagaatgtcatggaagagga
acatgcaactactattcaaattcctacagtttctggttggcttcattagaccccagaaga
atgttcagaaaacctattccgtcaactgtgaaagctggggagttagaaaagataataagt
cgctgtcaggtgtgcatgaagaggagacattga
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