Orcinus orca (killer whale): 101271554
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Entry
101271554 CDS
T05247
Symbol
SYN1
Name
(RefSeq) synapsin-1 isoform X1
KO
K19941
synapsin
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101271554 (SYN1)
Membrane trafficking [BR:
oor04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101271554 (SYN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
101271554
NCBI-ProteinID:
XP_004282028
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Position
X:complement(42885761..42937426)
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AA seq
706 aa
AA seq
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MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPAAPSPGATPGPATATAERASSAAPV
ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAAARVLLVID
EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKP
DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQVLPR
QRQRDASPGRGSHSQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
LQQRPTPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQATPLPQGQGRQSRPVAGGP
GAPPAARPPASPSPQRQAGPPQATRQTSASGQAPPKASGAPPGGQQRQGPPQKPPGPAGP
TRQASQAGPMPRTGPPTTQQPRPSASGPAGRPTKPQLAQKPSQDVPPPATAAAGGPPHPQ
LNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctgcggcgccgcctgtcggacagcaacttcatggccaatctgccaaatggg
tacatgacagacctgcagcgcccgcagccgcccccgccgccgcccgctgcccccagcccg
ggagccacgcccggtcctgcgaccgccactgctgagagggcctcatcggcagcccccgtg
gcctctccggctgcccctagccccgggtcctctgggggcggtggcttcttctcgtcactg
tccaatgcggtcaagcagaccacggcggccgcggccgccaccttcagcgagcaagtgggc
ggcggctctgggggcgcaggccgtgggggcgctgccgccagggtgctgctggtaatcgac
gagccccacaccgactgggcgaaatacttcaaagggaaaaagatccatggagaaattgac
attaaagtagaacaggctgaattctctgatctcaacctcgtggctcatgccaatggtgga
ttctctgtggacatggaagtccttcggaatggggtgaaggttgtgcggtctctgaaacca
gacttcgtgctgatccgccagcatgcgttcagcatggcacggaatggagactaccgcagt
ttggtcattgggctgcagtatgccggaatccccagcgttaactctttgcattctgtctac
aacttctgtgacaagccctgggtgttcgctcagatggttcgactgcacaagaaactgggg
acagaggaattccctctaatcgatcagaccttctaccccaatcacaaagagatgctcagc
agcacaacgtaccctgtggttgtgaagatggggcacgcacactctgggatgggtaaggtc
aaggtggacaaccagcacgacttccaggacatcgcaagtgtcgtggcactgaccaagaca
tatgccactgccgagcccttcattgatgccaaatacgatgtgcgcgtccagaagattggg
cagaactacaaggcctacatgaggacgtcagtgtcaggaaactggaagaccaacaccggc
tctgcgatgcttgagcagattgccatgtctgacaggtacaagctgtgggtggacacgtgc
tcagagatctttgggggactggacatctgcgcagtggaagcactgcatggcaaggacgga
agggatcacatcattgaggtggtgggctcctccatgccgctcatcggtgaccaccaggat
gaagacaagcaactcatcgtagagcttgtggtcaacaagatggcccaggtcctgccccgg
cagcggcagcgggatgcgtctcccggcaggggctcccacagccagactccgtccccaggg
gccctgcccttgggccgccagacctcccagcagcccgcggggcccccagctcagcaacga
cccccgccacagggcggccctccacagccgggcccaggcccccaacgccagggacccccg
ttgcagcagcgcccgaccccgcagggccaacagcacctttcgggccttggacccccagct
ggcagccccctgccccagcgccttccgagtcccacatcagcgccccagcagcctgcgtcc
caggccacaccgctgccccagggtcaaggccgccaatcccggccagtggcgggaggcccc
ggggcacctccagcagcccgcccacccgcctccccctctccccagcgccaggcaggcccc
ccacaggctactcgtcagacatcggcctctggtcaggctccgccaaaggcctcaggggct
ccaccgggtggtcagcagcgccagggcccaccccagaagcccccaggccctgccggcccc
acacgccaggccagccaggcgggtcccatgccccgcactgggccacccaccacgcagcag
ccgcgacccagtgcctccggccctgctggacgtcccaccaagccacaactggcccagaaa
cccagccaggatgtgccaccacctgccactgccgctgccgggggacccccacacccccag
ctcaacaaatcccagtctctgaccaatgccttcaaccttccagagccagccccgcccagg
cccagccttagccaggacgaggtgaaagctgagaccatccgcagcctgaggaagtctttc
gccagcctcttctccgactga
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