Orcinus orca (killer whale): 101271563
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Entry
101271563 CDS
T05247
Symbol
SSC5D
Name
(RefSeq) soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
KO
K25740
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101271563 (SSC5D)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
101271563
NCBI-ProteinID:
XP_049559313
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All DBs
Position
20:55909561..55939279
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AA seq
1586 aa
AA seq
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MVALMGIQAVEWLRLADGPHGCAGRLEVWHGGRWGTVCDDGWDLRDAAVACRELGCGGAL
AAPGGAFFGEGAGPVWLSELACRGGEQQLGLCPHRGWKAHICSHEEDAGVVCAGQRVSDS
RDWDDSPSVLDGDPWPGLSGELSPGSEEAPVMPAPRPAGTPQSGSRKKSPRPPKPAKSTR
APLLTAGAPRQERLRLVSGPHGCAGRLEVWHGGRWGTVCDDGWDLRDAAVACRELGCGGA
LAAPGGARFGPGAGPVWMDDVGCGGGEQALRDCPRSPWGRSNCDHSEDAGLVCTGPAPRL
RLADGPHGCAGRLEVWHSGRWGSVCDDAWDLRDAAVACHELGCGAALAAPGGAFFGEGAG
PILLDDLRCRGNETALRFCPARPWGQHDCHHREDAGAVCDGMPLGYVPPTAPAVGSNSSR
PRETASRPPPPTVSQAARIAGISPPPASPAAPQEPGPEAGSPQLRLVAGPSRCSGRLEVW
HGGRWGTVCDDSWDLRDSAVVCRELGCGGPRQPDPAAGRFGWGAGPIWLDDVRCVGTEAS
LADCPAAPWGKHNCAHNEDVGVTCTGTPGLDSISDPFSWSWIPGLGRDPDAWLPGELATK
PSARRTPSVPEKTTTKAPGKIPKSTKKWVTKNAKRPTTQPAVIPTTKHSRATGTQSPPEL
TSLTTTTPTTEASRRPTSEFTTRLTTEDPHRLTSHTTERRTPRVPRERTSKTLATPTTQG
PRELTSEATMEPLAEIPGVGTPESSKDPAPSPTGASAGLFRVRLADGPNRCAGRLEVWHA
GRWGTVCDDSWDLRDGMVACWELGCGRVRPRVGKTHYGPGTGPIWLDDVGCKGSEASLSD
CPARAWGQHNCDHEEDVGLTCTGYADEEDYPPWTWDPTSGEDLAKGTTAAAVPAHALPWG
TAGSTGAPSPTTRRLPSTGGEDGYEPSWTWDTPSGEVPAKGTPTTGIPGPSGTAGTIRSP
GHPSLAPRVRGDTGSLRKPWPERRLRPTAARTAPPTTSPAPSASPGPPGPVLTSDSSPQL
IPTAASTAEVTSDPPATLPPSPDPASWMNSHRTLTTPGLTLSTPDATVFPALTPGLSPTP
PPTMPKELTSDPSAPAVVTRLSPTSELTPESDTTPVWDTSPYPNTTPEPSSFPDPSTSPH
PTTIPHSTMTSHPTTTSHPTTTLYPTTTPHSKTSHPTTTPYPTMTSHPTATPYPTPTPHS
TTTSHPTTTPPPITTAQPITTPYSTTTPQPTTTPQPTTTPYPTTTSHPTTAPYPTMTSHT
TATPYPTPTPHSTSTPHPTTAPPPITSAQPITTPYATTTPHPTTTPQPTTTPPPITSAQP
ITTPYPATTPHLTTTAYPTMTPHPTSTPMVTAKSLLTSLGTELPFPSSAPTVKPSPHPRL
TFTGAPHPSTSQMWSLEPCPATESSPCRPSPAPSVDTLSTENFKPPTSQSPKVTSPPTQT
PHSASDPTVTPDLHLSPMAPPLDQPPPDRLTLGPTPGQSPGPLGPCEAPVPPVRVMACDP
PALVELVAAVRDVGSQLQRLTQALERDQQERHALGLGLTQLVEAAQGLGQLGEVVKRLAE
VAWPPSTPAPTTATPEEEERPLRGDV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggtggctctgatggggatccaggctgttgagtggctgcgtctggccgatggcccccac
gggtgcgcgggccgcctggaggtgtggcacggcgggcgctggggcaccgtgtgcgacgat
ggctgggacctgagggatgctgctgtggcctgccgcgagctgggctgtgggggcgcgctg
gctgcccctggaggcgccttcttcggggagggcgcggggcccgtgtggctgagcgagctg
gcctgccggggcggtgagcagcagctgggcctctgcccccaccgcggctggaaggcccac
atctgctcccacgaggaggacgcaggcgtcgtctgtgcaggtcagcgtgtgtcggactcc
agggattgggacgactcaccttcagtcctggatggggacccctggccagggctgtctggg
gagctgagccccggctctgaggaggccccggtgatgcctgccccccgcccagccgggacc
ccccagagcggctcccggaagaagagcccccggccgcccaagcctgccaagtccactagg
gcccctttgctgactgccggagccccccgccaggagcggctgcgcctggtctccggcccc
cacgggtgcgccggccgcctggaggtgtggcacggcgggcgctggggcacggtgtgcgat
gacggctgggacctgcgggacgccgccgtggcctgccgcgagctgggctgcgggggtgcg
ctggccgcccccggcggggcccggttcggcccgggcgcagggcccgtgtggatggacgac
gtggggtgcggaggcggggagcaggccctgcgggactgtccccgaagcccctggggccgg
agcaactgtgaccacagcgaggacgcaggactggtctgcaccggcccggcccccaggctg
cgtctggcagacggcccccacgggtgcgcgggccgcctggaggtgtggcacagcgggcgc
tgggggtccgtgtgtgacgatgcttgggacctacgggacgccgctgtggcctgccacgag
ctgggctgcggggccgcgctggctgcccctggaggcgccttcttcggggagggggctgga
cccatcctcctggacgatcttcgctgtcggggaaacgagacggccttgcgcttctgccct
gcacggccctggggccagcatgactgtcatcaccgggaggacgctggggccgtgtgtgac
ggtatgcctctgggatatgtccctcccacggcccccgcggtgggcagcaacagctccagg
cccagggagactgcatccaggcccccgccccccacggtgagccaggctgcacggatagca
ggcatttcacctccgcccgcttcccctgcggcccctcaggagcctgggccggaagctggg
tccccccagctgcgcctggtggccgggcccagcaggtgctcaggccggctggaggtgtgg
cacggtgggcgctgggggaccgtgtgtgacgacagctgggacctgcgggactcggctgtg
gtctgccgggagctgggctgcggtggacctcggcagccagaccctgctgccggccgcttc
ggctggggcgccggccccatctggctggatgacgtgaggtgtgtggggaccgaggcttcc
ctcgctgactgccctgccgctccctgggggaagcacaactgtgctcacaacgaggatgtt
ggagttacctgcactgggacccccggcctggactccatctcagaccccttcagttggagc
tggatccctggcctgggtagagatccagacgcctggctcccgggggagctggccaccaag
ccctctgcgaggcggacccccagcgttcctgagaaaaccaccaccaaggccccagggaag
atacccaaaagcacaaagaagtgggtgaccaaaaacgcaaagagaccgaccactcagccc
gccgtgataccaaccactaagcactccagggccacgggcacccagagtcccccagaactg
acctcactgaccaccaccactccgaccactgaggcctcccgaagaccgacctctgagttt
accaccaggctgaccacagaggaccctcacaggctgacctcacacaccactgaaaggcgg
actccccgggtcccccgggaacggacctctaagaccctggcaacaccgaccacccagggc
ccccgagaactgacctctgaggccaccatggagccattggccgagatcccaggagtaggt
actccagagtcctccaaagacccagccccctcccccactggggcatcagcaggcctgttc
cgggttcgtctggctgatgggcccaaccggtgtgccgggcggctggaggtgtggcacgct
ggacgctgggggacagtgtgtgatgacagctgggacctgcgggatggcatggtggcctgc
tgggagctgggctgcggaagggttaggccccgagtgggcaaaacccactacggccctggc
accgggcccatctggctggatgacgtgggctgcaagggaagtgaggcctcgctgagcgac
tgccccgctagggcgtggggacagcacaactgtgaccacgaggaggacgtggggctcacc
tgcactggctatgcagatgaggaagactatcccccctggacctgggaccccacctcagga
gaggacctggccaaggggaccaccgcggcagcggtgcctgcacacgctctcccctggggc
acggctgggagcacaggggccccctccccaacgacgaggcgccttccaagcacaggtggc
gaggatggttatgagccttcctggacatgggatacaccttcaggagaggtcccagccaag
gggacccccaccacaggcatacctggaccctctggcaccgctggcaccatcaggagccca
ggccatccctctctagctccaagggtccgtggggatacaggttcactgaggaaaccgtgg
cccgagcgacggctgcggcccacagcggccaggactgcgccccccaccacttccccagct
ccctccgcctcgccggggcccccgggccctgtcctgacctctgactcctcgccgcagctc
atccccacagcagcttcaacggcggaggtgacctctgaccctcccgccactttgccgccc
agcccagacccggcctcctggatgaactctcaccgcaccttgacaacccctggccttacc
ttgtccacccctgatgccaccgtgtttccagcgctgacccctgggctttcacccactcca
ccacccaccatgcccaaagaactgacctctgacccctctgcaccggcggtggtgacccgc
ctttcccctacctcagagctgacaccagagtctgacacaaccccagtctgggacacatct
ccataccccaacacaactccagaaccttctagtttcccagacccttccacaagtcctcac
cccactaccatccctcactccaccatgacctctcaccctaccacgacctctcaccccact
accaccctttaccccaccacgacccctcactccaagacctctcaccccaccacaacccct
tatcccaccatgacctctcaccccactgccaccccttaccccacccccacccctcactct
accacaacctctcaccccaccacgacccctcctcccatcaccactgctcaacctatcaca
accccttactcaaccacaacccctcaacccaccacgacccctcaacccaccacgacccct
tatcccaccacgacctctcaccccaccacagccccttatcccaccatgacctctcacacc
accgccaccccttaccccacccccacccctcactctacctcaacccctcaccccaccaca
gcccctcctcccatcaccagtgctcaacctatcacaaccccttacgcaaccacaacccct
caccccaccacgaccccacaacccaccacaacccctcctcccatcaccagtgctcaaccc
atcacaaccccttaccctgccacgacccctcacctcaccaccactgcttaccccaccatg
actcctcaccccacctcaacccctatggtcactgccaagtcccttctaacttccttggga
acagaacttccctttccctcttcagcaccaacagtcaagcccagcccacacccccggttg
accttcacgggggcccctcacccctccacgtcccagatgtggagcctagagccctgtcca
gcaacagagtccagcccctgcaggccctctccagcccccagcgtagacacactgtccact
gagaacttcaaaccacccacaagccagagccccaaagtaacctctccacctacccagact
ccacactcagcctctgaccccactgtgacccctgacctccacctgtcccctatggccccc
cccttggatcaacctccccctgaccgcctcaccctagggccaactcctggtcagagccca
ggcccccttggcccatgtgaagccccagtgccacctgtaagggtcatggcttgtgatccg
cctgccctggtagagctggtggccgctgtgagggatgtgggtagccagctacagaggctg
acacaggctctggagcgggaccagcaggagcgccacgccctgggactggggttgacccag
ctggtggaggctgcccagggtctggggcagctgggtgaggttgtaaagagactggcagag
gtggcctggccccccagcacacctgcaccaaccactgctaccccagaggaggaagagagg
cctctgcggggagatgtgtga
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