Orcinus orca (killer whale): 101273473
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Entry
101273473 CDS
T05247
Symbol
SAFB
Name
(RefSeq) scaffold attachment factor B1 isoform X2
KO
K25092
scaffold attachment factor B
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101273473 (SAFB)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101273473 (SAFB)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
101273473
NCBI-ProteinID:
XP_004277291
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All DBs
Position
3:4253949..4288270
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AA seq
911 aa
AA seq
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MAETLSGLGDSGAAGAAALSSASSETGTRRLSDLRVIDLRAELRKRNLDSSGNKSVLMER
LKKAIEDEGGNPDEIEITSEGNKKTSKRSSKGRKPEEEGVEDNGLEENSGDGQEDVETTL
ENLQDIDMMDISVLDEAEIDNGSVADCVDDDDADNLPESLSDSRELVEGEMKELPEPLQE
HAVEDKETINNLDTSSSDFTILQEIEEPSLEPENEKILDILGETCKSEPVKEEGSELEQP
FAQETSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAQAQSSKADTLLAVVKREPVEQ
TGDGERTDCEPVGLEKPVEQSSKASEHTEACSEEASEAPPEASSPDPRDSKEDVKKFAFE
ACNEVPPAPKESSASEGADQKMSSVEDDLDTKRLSKEEKGRSSCGRNFWVSGLSSTTRAT
DLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVE
KAKNEPAGKKTSDKREGEGKKEKSSNADRSANLKREEKPDRKDDAKKSEDGSGEKSKDQD
DQKPGPSERSRTTKSGSRGTERTVVMDKSKGVPVISVKTSGSKDRVSKSQDRKSASREKR
SVVSFDKVKESRKSRDSESRRVRERSEREQCMQAQLEREERKRLLIARERLAFHRHRLER
ERLERERLERERMRVEHERRREQERIHHEREELRRQQELRYEQERRPAVRRPYDDGRRDD
AYWPEAKRAALDERYHSDFNRQDRFHDFDHRDRGRYPDHSVDRREGSRSIMGEREGQHYP
ERHGGPERHGRDSRDGWGGYSSDKRMSEGRGLPPPPRREWGDHSRRMEDDRAWQGAADGG
MMDRDHRRWQGGERSMSGHSGPGHMMNRGGMSGRGSFAPGGASRGHVIPRGGFGGQNRGS
RPNDARFTRRY
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcggagactctgtcaggcctaggcgattcgggtgcggcgggcgcagcggctctgagc
tccgcctcgtcggagaccgggacgcggcgcctcagcgacttgagggtgatcgatctgcgg
gcggagctgaggaaacggaacctggactcgagcggcaacaagagcgttttgatggagcgg
cttaaaaaggcaattgaagatgaggggggtaatcctgatgaaattgaaattacctctgaa
ggaaataagaagacatcaaagagatccagcaaagggcgcaaaccagaagaagagggtgtg
gaagataacgggctagaggaaaattctggggatggacaggaggatgttgagaccactttg
gagaacttgcaggacatcgacatgatggatatcagtgtgttggatgaagcagaaatcgat
aatggaagtgttgcagattgtgtggacgacgacgatgctgataatctcccggagtccctg
tctgatagtagagagctagtcgagggagaaatgaaggagcttcctgagccgcttcaagaa
catgctgtagaggacaaagaaactataaacaatttagatacttcatcatctgacttcact
atattacaggaaattgaagagccatccttggagccagaaaatgagaaaatactcgacatt
ttgggggaaacttgtaaatctgagccagtaaaagaagaaggttccgagctggagcagcca
tttgcacaggaaacaagtagcgtggggccagacagaaagcttgcggaggaagaggacctt
tttgacagcgcccatccggaggagggtgatttagatttggccagcgagtcaacagcacaa
gctcagtcgagcaaggcagacaccctgttagcggtagtgaaaagggagcccgtggagcag
acaggcgatggcgagaggacggactgtgagcctgtagggctagagaagccagttgagcag
agtagtaaagcctcagagcacacggaagcctgtagcgaggaggcctcggaagcgcccccg
gaagcctcaagcccagaccccagggatagcaaagaagacgtgaagaagtttgcttttgaa
gcttgtaatgaagtccctccggctcctaaagagtcctcagccagtgagggcgctgatcag
aaaatgagttctgtcgaagatgacttggataccaaaaggctttccaaagaggaaaaaggt
cgtagcagttgtggtaggaatttctgggttagtggactttcttctaccaccagagctaca
gatttgaagaatcttttcagcaagtatgggaaggtggtgggcgccaaggttgtgaccaac
gcccggagtcctggagctcgctgctacggctttgttaccatgtccaccgcggaagaggcc
acaaaatgcattaaccacctgcacaaaacagagctccacgggaagatgatctcagtggaa
aaagcaaaaaatgaacctgctgggaagaaaacttctgacaaaagagaaggggaggggaaa
aaagagaagtctagcaatgctgacagatctgcaaaccttaagagagaagagaagcctgac
agaaaagatgatgctaaaaagagtgaagatggaagtggagaaaagagcaaagatcaggat
gatcagaaacctggcccttcagaacgatctcgaaccacaaaatcaggaagtcgaggaact
gagcggactgtggtgatggataaatctaaaggtgtccctgttatcagtgtcaaaacatca
ggatccaaagacagagtttccaagagccaggatcgcaaatcggccagcagggagaagcgg
tctgttgtgtcctttgataaagtcaaagagtcgaggaagtcacgagactcagagtcccgc
agggtgcgcgagcgcagtgagcgagagcagtgcatgcaggcacagctggagcgggaggag
cgcaagcggctgctcatcgcccgcgagaggctggctttccacagacatcgcctggagcgg
gagcgactggagcgcgagcggctggagcgcgagcgcatgcgcgtggagcacgagcgcagg
cgcgagcaggagcgcatccaccacgagcgcgaggagctgcggcgccaacaggagctgcgc
tatgagcaggagcggcggcccgccgtgcggaggccctacgacgacgggcggcgagatgat
gcttactggccagaagctaagcgggccgccctggatgagcgttaccattctgacttcaac
cgccaggaccgcttccacgactttgaccacagggaccggggacgctaccctgaccactca
gtcgacaggagagaaggttcaaggtcaatcatgggagaaagagaaggacagcattacccc
gaacgccacggaggaccagagcgccacggacgggattcccgtgatgggtggggcggatac
agctctgacaagaggatgagcgagggccgggggctgcctcctccccccagacgtgagtgg
ggggaccacagccgaagaatggaggatgaccgtgcgtggcagggcgctgctgacggaggc
atgatggacagggaccataggaggtggcaaggcggtgagagaagtatgtctggtcactcg
gggccaggtcacatgatgaaccggggaggcatgtcagggcgcggcagctttgcccccggg
ggggcctctcggggccacgtgatccctcgtggcggcttcgggggccagaaccgggggagc
cgacccaacgacgcccgcttcactcgccgctactaa
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