Orcinus orca (killer whale): 101274482
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Entry
101274482 CDS
T05247
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor04714
Thermogenesis
oor05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101274482 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101274482 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101274482 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101274482 (ARID1B)
03021 Transcription machinery [BR:
oor03021
]
101274482 (ARID1B)
03036 Chromosome and associated proteins [BR:
oor03036
]
101274482 (ARID1B)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Helix-turn-helix
ARID
101274482 (ARID1B)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101274482 (ARID1B)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101274482 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101274482
NCBI-ProteinID:
XP_033260139
LinkDB
All DBs
Position
12:complement(9867629..10279822)
Genome browser
AA seq
2419 aa
AA seq
DB search
MAARAAAAAAARARAGSGERRAPPGPRPAPGARDLEAGARGAATAAAAAPGPMPGGGGDG
SGLNNVHHHPPHPRHELNMAHNASAAAAAASANSAKSGGSEAALKEGGSAAALSSSSSAA
ASSSSSSAGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHLHHHAHHLHRHHH
ALQQQLSQFQQQQQQRQQHPISNNSLSGAGSGTAQPGPDMEQPQHGGAKDSAGGSQAEPP
GQPLLSKPGDEDDAPPKMGEPAGGRYEQPGLGALGAQQQPVAVPGGGGGGGGGGVGGGVG
GPAAVSEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPNSMDPL
QNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGSGGGGGGGGGGAGAGAVAAAAAAAA
AAAAAAGGGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQ
RFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPPPSQPQSQAAAAA
GAAAGGQQAAAGMGLSKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDP
MVMKRPQLYGMGSNPHSQPQQSSPYPAGSYGPPGTQRYPIGIQGRTPGAMGGMQYPQQQV
PPQYGQPGVSGYCQQGQQPYYSQQPQAQYLPSQPQQRYQPQQDMSQEGYGTRSQPPLAPG
KPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSASGST
SSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPP
QPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHP
GISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANSQMHGQG
PSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA
AAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMMNQPDQYGQGG
FPGVNQSGLMASSSPYSQPMSNSSGLMNTQAPPYSMTPNMVNSSTASMGLADMMSPGESK
LPLPLKADGKEEGTAQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDES
DSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLF
AFECKTERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDL
KPPTPASTPHGQITPMQGGRSSTVSVHDPFSDASDSSFPKRNSMTPSAPYQQGMSMPEVM
GRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMAASSMQDMYNQSPSGAMSSLGMGQRQPFP
YGASYDRRHEPYGQQYPGQGPPSGQPAYGGHQPGLYPQQTNYKRHMDGVYGPPAKRHEGD
MYNMQYGNQQQEMYNQYGSSYSGPDRRPIQGQYPYPYTRERMQGPGQIQAHGIPPQMMGG
PMQSSSSEGPQQSMWATRNDMPYPYQSRQGPGGPAQTPPYPGMNRTDDMMVPDQRINHES
QWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPS
KSPFLPSMKMQKVMPTVPTAQVTGPAPQPPPVRREITFPPGSVEASQPVLKQRRKITSKD
IVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKC
LIDIFGILMEYEVGDPSQKALDHNVVKRDDSQSLADDSGKEEEDAECIDEEEDEEEDEEE
DGGKAETEDRSSMALASPDATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQ
EFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSATGRKKEQEGKGDPEEQQE
KSIIATIDDVLSARPGALPEDANPGTQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDEAP
LCTVAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKR
APQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILD
GLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEK
FYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMA
QYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAV
LNSLVASVICDVLFQIGQL
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcgcgggcgcgggctggcagcggcgagcgg
cgggcgccccccgggccgcggccggcgcccggggcccgggacctagaggcgggggcgcgc
ggcgcggcgacggcggcggcggcggcaccgggacccatgccggggggcggcggcgacggc
agcggcctgaataacgtgcaccaccaccccccgcacccccgtcacgaactgaacatggcc
cataacgcgagcgcggcggccgccgccgccagcgctaacagcgccaagagcggcggctcc
gaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctccgcggcg
gcgtcctcctcttcctcctcggcgggcccgggctcggccatggagacggggctgctcccc
aaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccccaccagcagcaccac
caccaccaccatgcccaccacctgcaccaccatgcccaccacctccaccgccaccaccac
gcactacaacagcagctaagccagttccagcagcagcagcagcagcggcagcagcatccc
atttccaacaacagtctcagcggcgcgggcagtggcacggctcagcccggtcccgacatg
gagcaaccgcaacatggaggggccaaggacagtgccgggggcagccaggccgagcccccg
ggccagcctctgctgagcaagccgggcgacgaggacgacgcgccgcccaagatgggggag
ccggcgggcggccgctacgagcagccgggcctgggcgccctgggcgcgcagcagcagccg
gtcgccgtgcccgggggcggcggcggcggcggcggcggcggcgtcggcggcggcgtcggc
ggcccggcggccgtctcggagtttaataattactatggcagcgctgccccagctagcggc
ggccccggcggccgcgctgggccttgctttgatcaacatggcggacaacaaagccccggg
atggggatgatgcactccgcctcagctgccgccggagcccccaacagcatggaccccctg
cagaactcccacgaagggtaccccaacagccagtacaaccattatccgggctacagccgg
cccagcgcgggcggcggcggcggcggcggaggaggaggaggaggcagcggaggaggagga
ggaggaggaggaggaggagcaggagcgggagctgtggcggcggcggccgcggcggcggcg
gcggcggcagcagcagcaggaggcggcggcggcggcggcggctatgggggctcgtcctcg
gggtacggggtgctgagctccccccggcagcagggcggcggcatgatgatgggccccggg
ggcggcggggccgcaagcctcagcaaggcggccgccggcgcggcggcggggggcttccag
cgcttcgccgggcagaaccagcacccgtcgggggccactccgaccctcaaccagctgctc
acctcgccgagccccatgatgaggagctacggcggcagctacccggactacagcagcccc
agcgcgccgccgccgccgccgccgccgtcgcagccccagtcccaggcggcggcggcggcg
ggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgagcaaggacatgggc
gcccagtacgccgctgccagcccggcctgggcggccgcgcaacaaaggagccacccggcg
atgagccccggcacccccggcccgaccatgggcagatcccagggcagcccaatggatccc
atggtgatgaagagacctcagctgtatgggatgggcagtaaccctcattctcagccacag
cagagcagcccttacccggcaggttcctacggccccccaggcacacagcggtatccgatt
ggcattcaaggtcggaccccaggggccatgggaggaatgcagtacccacagcagcaggtg
ccgcctcagtatggccagccaggtgtgagcggttactgccagcagggccagcagccttac
tacagccagcagccgcaggcgcagtatctgccgtcccagccccagcagaggtaccagccg
cagcaggatatgtctcaggaaggctatggaactaggtctcaacctcctttggctcctgga
aaacccaaccatgaagacttgaacttaatacaacaagaaagaccatcaagtttaccagtt
gaagtcttgacctcggaggatactgcctttggactcaaggacctgtctggctccattgat
gacctccccacgggaacggaagcaactttgagctcagcagtcagtgcatccgggtccaca
agcagccaaggggatcagagcaacccagctcagtcgcctttctctccacacgcatctccc
catctctccagcatccctgggggcccatcgccttctcctgtcggctctcctgtaggaagc
aaccagtcacgatctggcccaatttctcctgcaagtattccaggcagtcagatgcctcct
cagccacctgggagccagtcagaatccagttctcatcctgccttgagccagtcaccaatg
ccacaggaaagaggttttatggcaggcacacaaagaaaccctcagatgtctcaatatgga
cctcaacagacaggaccatccatgtcgcctcatccttctcctggaggccagatgcatcct
ggaatcagtagctttcagcagagtaactcaagtgggacttacggtccacagatgagccag
tatggaccacaaggtaactactccagacccccaacatatagtggggtgcccagtgcaagc
tacagcggcccagggcccggcatgggcatcaatgccaacagccagatgcatggacaaggg
ccaagccagccgtgtggtgctatgcccctgggacgaatgccatcagctgggatgcagaac
agaccctttcctggaaatatgagcagcatgacccctagttctcctggcatgtctcagcag
ggagggccaggaatggggccaccaatgccaaccgtgaaccgtaaggcacaggaggcagct
gccgcagtgatgcaggccgctgcgaactcggcacaaagcaggccaccatacattaggtcg
cctgcttatcccagccagtctggggctggcggacgccccatgttttcttcccagcacccc
aactatggcaactctcaggctcccatgatgaaccagcctgaccagtacgggcaaggcggc
tttcctggcgtgaatcagagcggactcatggcttccagctctccctacagccagcccatg
agcaacagctctgggctgatgaacacccaggcgcccccctacagcatgacgcccaatatg
gtgaacagctcaacagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaa
ctgcccctgcctctcaaagcagatggtaaagaagaaggcaccgcacagccggagagcaag
tcgaaggatagctacagctctcagggtatttctcagcccccaacccccggcaacctgcca
gtcccttccccaatgtcccccagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaagtccagctcatcc
accaccactggcgaaaagatcacaaaggtgtatgaattggggaatgagccagagagaaag
ctgtgggtagaccgatacctcaccttcatggaggagagaggctccccggtctcaagtctg
cctgcggtgggcaagaagcccttggacctgttccgactctacgtctgcgttaaagagatt
ggaggtttggcacaggttaataaaaacaagaagtggcgcgagctggcaaccaacctaaat
gtcggcacttcaagcagtgcagcgagctccctgaaaaagcagtatattcagtacctgttt
gcctttgagtgcaagactgagcgaggggaggagcccccgccggaagtcttcagcacggga
gacaccaagaagcagcccaagctccagccgccctctcctgctaactcaggatccttgcaa
ggtccacagactccccagtcaactggcagtaattccatggcagaggttccaggtgacctg
aagccgcctactccggcctccacccctcacggacagattaccccaatgcaaggtggaaga
agcagtacagtcagtgtgcacgacccattctcagacgcaagtgattcatcattcccaaaa
cgcaactccatgactccgagcgccccataccagcagggcatgagcatgccagaagtgatg
ggcaggatgccctacgagcccaacaaggacccctttggaggaatgagaaaagtgcctgga
agtagcgagccgtttatgacgcaaggacagatggccgccagcagcatgcaggacatgtac
aaccagagtccgtctggagcgatgtccagtctaggcatggggcagcggcagccgtttccc
tatggagccagttacgatcgaaggcatgaaccttacgggcaacagtacccaggccaaggc
cctccctcaggacagccagcatatggaggacaccagccgggcctgtatccacagcagacg
aattacaagcgccatatggatggcgtgtatgggcctccagccaaacgccacgagggagac
atgtacaacatgcagtacggcaaccagcagcaagagatgtataaccagtacggaagttcc
tactccggacccgacaggaggcccatccagggacagtacccgtacccctacaccagggag
aggatgcaaggcccggggcagatacaggcgcacgggatcccaccccagatgatgggcggc
ccaatgcagtcgtcttccagcgaagggcctcagcagagtatgtgggcgacacgcaacgat
atgccttatccctaccagagcaggcaaggccccggcggccctgcacagacacctccttac
ccaggcatgaaccgcacggacgacatgatggtacctgatcaaaggataaaccacgagagc
cagtggccttctcacgtcagccagcgtcagccttacatgtcctcttcagcctccatgcag
cccatcacgcgcccgcctcagtcatcctaccagacgccaccgtcgctgccaaatcatatc
tccagggcgcccagccccgcctccttccagcgctccctggagagccgcatgtctcccagc
aagtcccccttcctcccctccatgaagatgcagaaggtcatgcccaccgtccccacggcc
caggtcacggggccggccccccagccgcccccagtcagaagggagatcacctttcctcct
ggctctgtggaagcgtcacagcccgtcttgaaacaaaggcggaagattacctcaaaagat
attgttactcctgaggcctggcgtgtgatgatgtcccttaagtcaggtcttctggctgaa
agtacttgggctttggacactattaacattcttctgtatgatgacagcactgtcgctact
ttcaatctctcccagttgtccggatttctcgaacttttagtagagtactttaggaaatgc
ctgattgacatttttgggattcttatggaatatgaagtgggagaccccagccaaaaagca
cttgatcacaatgtggtaaagagagatgacagccagtccttggccgacgattctgggaaa
gaggaagaagatgccgaatgtattgatgaggaggaagacgaggaggaagacgaggaggag
gacggtgggaaggcggagactgaggacaggagcagcatggccttggcctcccccgatgcc
accgcggatccaaaggagaagcccaggcaagccagtaagttcgacaagctgccaataaag
atagtcaaaaagaacaacctgtttgtcgtcgaccggtctgacaagctgggccgtgttcag
gagttcagcagtggacttctgcactggcagctcggtggcggggacaccaccgagcacatc
cagactcactttgagagcaagatggaaattcctcctcgcaggcgtccacctcccccttta
agcgccacaggtagaaagaaagagcaagaaggcaaaggggaccctgaagagcagcaagag
aagagcatcattgcaaccattgatgacgtcctgtctgctcggccaggggctcttcctgaa
gacgcaaaccctggtacccaaaccgaaagcagtaagtttccctttggaatccatcaagcc
aaaagtcaccgcaatatcaagctgctggaggacgagccgcggagccgggacgaggctccg
ctctgcaccgtcgcgcactggcaggactcgctggctaagcgctgcatctgcgtgtcgaat
attgtccggagcttgtcttttgtgcctgggaatgacgctgaaatgtccaaacatccaggc
ttggtgctgatcctggggaagctgattcttcttcaccacgagcatcccgagagaaaacga
gcgccgcagacctacgagaaggaggaagacgaggacaaaggggtggcctgcagcaaagat
gagtggtggtgggactgcctcgaggtcttaagggataacacgttggtcaccttggccaac
atttctgggcagctagacttgtctgcttacacggaaagcatctgcttgccaatattggat
ggcttgctgcactggatggtgtgcccgtcagcagaggcacaagacccctttcccactgtg
ggacccaactctgtcctgtcgcctcagagacttgtgctggagacgctctgtaaactcagc
atccaggacaacaatgtggacctgatcttggctacgcctccatttagtcgtcaggagaaa
ttctatgccacgttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatg
tccatggcgcttttatcgaaccttgcccaaggggacgcgctggctgcaagggccatagct
gtgcagaaaggaagcatcgggaacttgataagcttcctagaggatggggtcacgatggcc
cagtatcagcagagccagcataacctcatgcacatgcagcccccgcctctagagccccct
agcgtggacatgatgtgcagggcggccaaggctctgctggccatggccagagtggacgag
aaccgctcagagttccttctgcacgagggtcgattgctggatatctcgatatcagccgtc
ctgaactctctggttgcgtctgtcatctgtgatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
