Orcinus orca (killer whale): 101275567
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Entry
101275567 CDS
T05247
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04022
cGMP-PKG signaling pathway
oor04024
cAMP signaling pathway
oor04740
Olfactory transduction
oor04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
101275567 (CNGB1)
04022 cGMP-PKG signaling pathway
101275567 (CNGB1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101275567 (CNGB1)
04740 Olfactory transduction
101275567 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101275567 (CNGB1)
Ion channels [BR:
oor04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101275567 (CNGB1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101275567
NCBI-ProteinID:
XP_049558816
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Position
20:27021708..27113502
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AA seq
1319 aa
AA seq
DB search
MVWRALPGRGPAAGAQRAAQRRRRCGRGRLPGVRMLGWVQRVLPQPPGTPVKREEEEGAE
PEPELEPEPETAPEETELEEESLPPEEACVGKEVAEADPGPQETQEAAPSPPTSLQAQAA
AVPEANSGPSSRVLTWLRKGVEKVVPQPVHSGRPAQSTVAGLEGPAQQAGGQILGHCSTG
GSDGYSESPRAQDTGPGPWLLRWLEQNLEKMLPQPPKTSEGWRDEPADAALGPEPPGPAL
EMEPVPQAQESPSLPAPVPPKPEEELTPEPQPGIQASSLPPTQDPARLMAWLLHRLEMAL
PQPVVLGKAGEQEPDSPVTCDVQSISILPGEQEEPSLILEDVDPHWEEYEYQEVSSQRGS
ETAPADEEESEEVEQMPRELPQIQEEKEDEEEEDGEEEEAEPLQSQDPLINSHSVLLDSC
LVAQGGEDQSGVGGAERQSPSHQELQEEAVAASSGVPATEEHPELQVEDADADSQPLNEE
ENPPSPTEEPPEVQVEDADADSQSLNEEENPPSPVPLPPSPAKCDTLGVPGSATGSLRKR
LCSQDDEAEELSPAVSPVVACSDPTSPQGTDDQDRAASTDSQTSALINNRLQELVKLFKE
RTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPALDVKPAESGQVEEEHYCEMLCCKFKRR
PWKKYQFPQSIDPTTNLMYIVWLFFVVLAWNWNCWLIPVRWAFPYQMPDNIHLWLLVDYL
CDLIYLLDITVFQLRLQFVRGGDIITDKKEMRNNYLKSQRFKMDMLCLLPLDFLYLKFGV
NPLLRLPRCLKYMAFFEFNNRLESILSKAYIYRVIRTTAYLLYSLHLNSCLYYWASAYEG
LGSTHWVYDGVGNSYIRCYYWAVKTLITIGGLPDPRTLFEIVFQGLNYFTGVFAFSVMIG
QMRDVVGAATAGETYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQGMLDESELM
VQLPDKMRLDLAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGR
EMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGGGNRRTANVIAHGFTNLFIL
DKKDLNDILVHYPESQKLLRKKARRMLRNDNKPKEQSVLILPPRPGTPKLFSAALAAAGK
MDAKGAKDGKLAHLRARLKELAALEAAARQQQVLEQAKSSEDAAGETRSAIPKQPAAPET
PAPGSPPPASQGRSEGEEGGAAWPEEHSVRVHMSPGPDPGEQILLVEIPEKEEKEEEEEE
EEGEGEGEEEEEKEEGEEEEEGEEKEEGEEKEEGEEKEEGEEKEEGEGEEGEEGEKEEE
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggcgagcgcttcctggacgtggccctgctgcaggagcacagcgcgcagcacag
cgccgccgccgctgcggccgagggcgcctaccaggtgtcaggatgctgggctgggtccag
agggtgctgcctcagcccccagggacaccagtgaagagagaggaggaggagggggcagaa
ccagagccagagttggagccggagcctgaaacagcccctgaggagactgagctagaggaa
gagtccctgccacctgaggaggcctgcgtggggaaggaagtggctgaggctgatccgggc
cctcaagaaacccaggaggctgccccttctccacccacatccctccaggctcaggccgct
gcggttccagaagcgaacagtggtcccagcagccgggtgctgacctggctcagaaagggt
gtggagaaggtcgttccgcagcccgtccacagtggcaggcctgcccagagcaccgttgct
ggcttggagggtccagctcagcaggcaggaggacagatccttgggcactgcagcactggg
ggctcagatggatacagtgagtcccccagggcccaagacaccgggcccgggccctggctg
ctcaggtggcttgagcagaatctggagaaaatgctgcctcagcctccgaaaacctccgag
ggctggagagatgagcctgcagatgctgccttgggtccagagcccccaggacccgccttg
gaaatggagcctgtgccgcaggcccaggagagcccatccctgcctgctcctgtccccccg
aagcccgaggaggagctgactccagagccccagcccggcatccaggcctcctccctgccg
cccacccaggaccctgccaggttgatggcgtggctcctgcaccggctggagatggccctg
ccgcagccagtggtccttgggaaggctggggagcaggagcctgactcccctgtgacatgt
gacgtgcagagcatcagcatcctcccgggagagcaagaggagcccagtctcatcctagaa
gatgttgaccctcactgggaggagtatgagtaccaggaggtcagcagccaacggggctca
gagacagctccagctgatgaagaggagagcgaggaggtggagcagatgcccagggagctg
cctcagattcaagaggagaaagaagacgaggaggaggaggatggagaggaggaggaagct
gagcctctccagagccaggatcctctcattaacagtcacagtgtcctgctggatagctgt
ctggtggcgcagggaggcgaggaccagagtggagtaggtggagccgagcgccagagcccc
tcgcaccaggagctgcaggaggaggccgtggccgccagctcaggagtacctgccacggaa
gagcacccagaattgcaggtggaagacgctgatgccgacagccagcccctcaacgaggag
gagaatccaccctctcccacggaagagcccccggaagtgcaggtggaagacgctgatgct
gacagccagtccctcaacgaggaggagaatccaccctctcccgtgccgctgcccccgtct
cctgccaaatgcgacacacttggggtcccaggatcagccacagggagcctcaggaagagg
ctgtgctcccaagatgatgaggctgaagagctgtcaccggctgtatcgcccgtggtcgct
tgttcggaccccaccagcccgcagggcactgatgaccaggaccgcgcagcctccacagac
agccagaccagtgccctcatcaacaaccggctccaggagctggtgaagcttttcaaggag
cggacggagaaggtgaaggagaagctcatcgaccctgatgtcacctctgatgaagagagc
cccaagccctccccagccaagaaagccccagagccggccctggatgtgaagccagctgaa
tcggggcaggtggaggaggaacactattgtgaaatgctctgctgcaagttcaaacgccgc
ccctggaagaagtaccagtttccccagagcatcgacccgacgaccaacctgatgtacatc
gtgtggctgttcttcgtggtgctggcctggaactggaactgttggctgattcccgtgcgc
tgggccttcccctaccagatgccggacaacatccacctctggctgctggtggattacctg
tgtgacctcatctacctcctggacatcaccgtgttccagctgcgtctgcagtttgtcaga
ggcggggacatcattacagacaaaaaggagatgcgcaacaattatctgaaatctcagcgc
tttaagatggatatgctctgcctcttgcccttggactttctctacttgaaattcggtgtg
aatcccctcctgcgcttgccccgctgtttgaagtacatggccttcttcgagtttaacaac
cgcctggaatccatcctcagcaaagcctacatttacagggttatcaggaccacagcctac
ctgctctacagtctacatttgaactcatgtctgtattactgggcttcagcctatgagggc
cttggctccactcactgggtttacgatggcgtgggaaacagttacattcgctgttactac
tgggctgtgaagaccctcatcaccatcggcggcctgcccgaccccaggacgctctttgaa
attgtcttccagggtctgaactatttcacaggtgtcttcgctttctccgtgatgatcgga
cagatgagagacgtggtgggggccgctactgcgggagagacctactaccgcagctgtatg
gacagcacagtgaagtacatgaacttctacaagatccccaggtccgtgcagaaccgggtc
aagacctggtatgagtacacctggcactcccaaggcatgctggacgagtcagagctgatg
gtgcagcttccagataagatgcggctggacctcgccatcgatgtgaactataacatcgtc
agcaaagtggcactcttccagggctgtgaccggcagatgatcttcgacatgctgaagaga
cttcgttctgttgtctacctgcccaacgactacgtgtgcaagaagggggagataggccgg
gagatgtacatcatccaggcggggcaggtgcaggtcttgggtggcccggatgggaagtcc
gtactggtgacgctgaaagctggatctgtgtttggagaaataagcttgctggccgttggg
ggcgggaaccggcgcacggctaacgtgatcgcccacgggtttaccaacctcttcattctg
gataagaaggacctgaacgacattctggtgcattatccggagtctcagaagttgctccgg
aagaaggccaggagaatgctgagaaatgacaacaaacccaaggagcagagcgtactcatc
cttcctccacggccaggcacccccaagctcttcagtgccgccctggctgcagcaggaaag
atggatgccaagggggccaaagatggcaagcttgcccacctcagggcgcgactcaaggag
ctggctgcgctggaggcggccgcaagacagcagcaggtgctggaacaggccaagagttcg
gaagacgcagcgggagagacgcgatcagctatcccaaaacagcccgcggccccggagacc
ccggccccaggctctccgccacctgcatcccaggggaggtccgagggagaagaggggggt
gcggcctggcccgaggagcactcggtgcgggtccacatgagcccaggcccggatcccggg
gaacagatcctgttggtggagatccccgagaaggaggagaaggaggaggaggaggaagag
gaggagggggagggggagggggaggaggaggaggagaaggaggagggggaggaggaggag
gagggggaggagaaggaggagggggaggagaaggaggagggggaggagaaggaggagggg
gaggagaaggaggagggggagggggaggagggagaggagggggagaaggaggaggaatag
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