Orcinus orca (killer whale): 101275576
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Entry
101275576 CDS
T05247
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor04714
Thermogenesis
oor05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101275576 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101275576 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101275576 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101275576 (ARID1A)
03021 Transcription machinery [BR:
oor03021
]
101275576 (ARID1A)
03036 Chromosome and associated proteins [BR:
oor03036
]
101275576 (ARID1A)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Helix-turn-helix
ARID
101275576 (ARID1A)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101275576 (ARID1A)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101275576 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101275576
NCBI-ProteinID:
XP_004266682
LinkDB
All DBs
Position
1:complement(191905909..191979306)
Genome browser
AA seq
2287 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAVAAERGEMKAAAGQESEGPA
VGPPQPLGKELQDGAESNGGGGGGGAGGGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPG
GGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLA
ALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGS
GAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPTAAGGGTPQPTATPTLNQLLTS
PSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAAAASGGAQQRSH
HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYP
GQPYGSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQPGPSGYGQQGQAPYYNQQSPHP
QQQQQPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPTPYPTQQ
STTQQHPQSQPPYSQPQAQSPYQQPPPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFP
PPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA
VPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSG
GQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAG
GQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETA
VAMHVAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNS
AGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP
ERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELAT
NLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGS
GSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPT
FQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD
PYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTAAPQPNLMPSNPDSGM
YSPSRYPAQPQPQPQPQQQRHDSYGNQFSAQGTPSSSPFPSQQTTMYQQQQQNYKRPMDG
TYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAY
PATAATERRPAGGPQNQFPFQFGRDRVSAPPGSSAQQNMPPQMMGGPIQASAEVAQQGTM
WQGRNDMTYSYANRQSTGSAPQGAAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGP
SAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAG
PPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVG
DPGQRTLLDPGRFSKASSPAPMEGVEEEDLLGPKLEEEEEEEVIENDEEMAFAGKDKAAS
ENSEEKLISKFDRLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTH
FESKTELLPSRPHVPCPPVTRKYVTAVEGTPGTTEQEGPPTDGPPEKRITATMDDMLSTR
SSTLTEEGAKSVEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLA
KRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQD
QGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAE
AQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDR
KNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHM
QNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDV
LFLIGQS
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gtagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggccccgcc
gtggggccgccgcagccactgggaaaagagctgcaggacggggctgagagcaatgggggt
ggcggcggcggcggagccggcggcggtggcgggcccggcgcggagccggacctgaagaac
tcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggc
ggcggtggtggcggcagcagcgacggggtgggggcgcctcctcactcagccgcggccgcc
ttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtcgcc
gccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggca
gcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcagaac
tcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcc
taccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccggggtcc
ggcgcggcggcggccgccggctccaagccgcctccctcctccagcgcctccgcctcctcg
tcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggccccacagcg
gccggagggggaacccctcagcccaccgccacccccaccctcaaccaactgctcacgtcg
cccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccccag
gacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgctgct
gctgctgctgctgcggcggcggcggcggccgcctcgggaggagcccaacaaaggagccac
cacgcgcccatgagccccgggagcagcggcggcgggggtcagccgctcgcccggaccccg
cagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggact
aacccatactcgcaacaacagggacctccatcaggaccgcagcaaggacatgggtaccca
gggcagccatatgggtcccagaccccgcagcggtacccgatgaccatgcagggccgagcg
cagagtaccatgggcggcctctcttatgcacagcagattccaccttatggacagccaggc
cccagcgggtatggtcagcagggccaggctccatattacaaccagcaaagccctcacccc
cagcagcagcagcagccctactcccagcagccaccatcccagacccctcacgcccagcct
tcatatcagcagcagcctcagtctcagccaccgcagctccagtcctctcagcctccgtat
tcccagcagccatcccagcccccccatcagcagtccccaaccccgtaccccacccagcag
tccaccacccagcagcacccccagagccagcccccctactcacagccgcaggcacagtct
ccttaccagcagccgccacctcagcagccagcatcctcgacgctttcccagcaggctgcg
taccctcagccccagtctcagcagtcacagcaaactgcctattctcagcagcgcttccct
ccaccacaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatg
acctccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccttcaagc
ttgcctgatctgtctggttcaatagacgatctccccatggggacagaaggagctctgagc
cctggagtgagcacatcagggatttcaagcagccaaggggagcagagtaatccagctcag
tctcctttttctccccatacctcccctcacctgcctggcatccgaggcccctccccgtcc
ccagttggctctcctgccagtgttgctcagtctcgctcaggaccactctcgcctgctgca
gtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcat
ccttctatgaaccaatcaagcattgcccaagatcgaggttacatgcagaggaacccccag
atgccccagtacagttccccccagcccgggtcggccttatctccacgtcagccttctgga
ggacagatgcacacaggcatgggctcctaccagcagaactccatggggagctatggtccc
cagggaagtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttg
cccaatgctaactaccccagtgcaggcatggctggaagcatgaaccctatgggtgctgga
ggtcagatgcatgggcagcctggcatcccaccttatggcacactccctccagggagaatg
agtcatgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcag
gttgggtcagggatgtgtcccccaccagggggtatgaaccggaaaactcaagaaactgct
gtcgccatgcacgttgctgccaactctatccagaacaggccaccaggctaccccaatatg
aatcaagggggcataatgggaactggacctccctatggacaagggattaatagtatggct
ggcatgatcaaccctcagggacccccatatcccatgggtggaaccatggctaacaattca
gcagggatggcagccagcccagagatgatgggtcttggggatgtcaagttaactccagcc
accaaaatgaacaacaaggcagatgggacacccaagacggaatctaaatccaagaaatcc
agttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcct
gagaggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatg
acaaatctgcctgctgtgggtaggaaacctctggacctgtaccgcctctatgtgtctgtg
aaggaaattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgacc
aacctcaatgtcggcacctcaagcagtgctgccagctccttgaaaaagcagtacatccaa
tgtctctatgcctttgagtgcaagatcgaacggggagaagaccctcccccagacatcttt
gcagctgctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatca
gggtcaatgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggggga
gacctgaagccaccaactccagcatccacaccacacagccagatcccccccttgccaggc
atgagcaggagcaattcggtcgggatccaggatgcctttcctgatggaagtgaccccaca
ttccaaaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctct
gacatgatggggcgcatgtcctacgagccaaataaggatccttatggcagcatgaggaaa
gctccggggagtgatcccttcatgtcctcaggtcagggccctaacggcgggatgggggac
ccctacagtcgagctgccggccctgggctgggaaatgtggcgatgggaccgcgacagcac
tatccctatggaggtccttatgacagagtgaggacggagcccggaataggacccgaggga
aacatgggcactgcagccccacagccgaatctcatgccttccaacccagactcggggatg
tattctcctagccgttaccccgcacagccgcagccgcagccgcagccgcagcagcaacga
catgattcctatggcaatcagttctccgctcaaggcaccccttccagcagccccttcccc
agccagcagaccacgatgtatcagcagcagcagcagaattacaagcggccgatggatggc
acatatggccctcctgccaagaggcacgaaggggagatgtacagtgtgccgtacagcacg
gggcaggggcagccccagcagcagcagttgcccccagcccagccccagcctgccagccag
caacaagctgctcagccttcccctcagcaagatgtgtacaaccagtatggcaatgcctat
cctgccactgctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattc
cagtttggccgagaccgtgtctcagcaccccctggctccagtgcccagcagaacatgcca
ccgcagatgatgggcggccccatacaggcatcggctgaggttgctcagcaaggcaccatg
tggcaggggcgtaatgacatgacctacagttacgccaacaggcagagcacgggctctgcc
ccgcaaggtgctgcctatcatggcgtgaaccgaacagatgaaatgctgcacacggatcag
agagccaaccatgaaggcccatggccttcccatggcacacgccagcccccatatggtcct
tctgcccccgtgccccccatgacaaggccccctccatccaactaccagcccccaccaagc
atgcagaatcacattcctcaggtatccagccctgctcccctgccccggccaatggagaac
cgcacctctcctagcaagtctccattcctgcactccgggatgaagatgcagaaggcaggt
cccccagtacctgcctcacacatagcacctgcccctgtgcagccccctatgattcggcgg
gacatcaccttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggagg
cggctcacgatgaaagacatcggaaccccggaggcatggcgggtaatgatgtccctcaag
tctgggctgctggcagagagcacgtgggcattagacaccattaacatcctgctgtatgat
gacaacagcatcatgactttcaacctcagtcagctcccagggttgctagagctccttgtg
gaatatttccgacgttgcctgattgagatctttggcattttaaaggagtatgaggtgggt
gacccaggacagagaacactactggaccctgggagattcagcaaagcgtctagtccagct
cctatggagggggtggaggaggaagaccttctaggtcccaaactagaggaggaagaagag
gaggaagtaattgaaaatgatgaggagatggcctttgcgggcaaggacaaagccgcctca
gagaatagtgaggagaaactgattagtaagtttgacaggcttccagtaaagattgtgcaa
aagaatgacccgttcgtggtggactgctcagataagcttgggcgcgtgcaggagtttgac
agtggcttgctgcactggcggattggtgggggggacaccactgagcatatccagacccac
tttgagagcaaaacagagctgctgccttcccggcctcatgtaccctgcccaccagtcact
cggaagtatgtcacagcagtagagggtacaccagggacaacagagcaggagggccccccg
actgatggccctccagaaaaacggatcacagccactatggatgacatgttgtccacccgg
tctagcacactgaccgaggagggagctaagagtgtagaggccaccaaggaaagcagcaag
tttccatttggcatcagcccagcacagagccatcggaacatcaagatcctagaggatgaa
ccccacagtaaagatgagaccccactgtgtacccttctggactggcaggattcccttgcc
aaacgctgcgtctgtgtctccaataccatccgaagtctgtcatttgtgccaggcaacgac
tttgagatgtccaagcacccggggctgctgctcatcctgggcaagctgatccttctgcac
cacaagcacccggaacggaagcaggcgccactgacttacgagaaggaggaggagcaggac
caaggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgcttcgggaa
aacaccttggtcacgctcgccaacatttcggggcagttggacctctccccataccccgag
agcatttgcctgcctgtcctggatggactcctacactgggcagtctgcccttcagctgaa
gcccaggaccccttctccaccctgggccccaacgccgtcctctccccacagagactggtc
ttggaaaccctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccaca
ccccccttcagccgcctggagaagttgtacagcaccatggtgcgcttcctcagtgaccga
aagaacccggtgtgccgggagatggctgtggtactgctagccaacctggcacagggtgac
agcctggcagcccgtgccattgcagtgcagaaaggcagcatcggcaacctcctgggcttc
ctggaggatagccttgctgccacacagttccagcagagccaggccagcctgctccacatg
cagaacccgccctttgagccaactagtgtggacatgatgcgacgggctgcccgtgcgctg
ctggccctggccaaggtggacgagaaccactcggagttcacgctgtatgagtcacggctg
ttggacatctcggtatcaccgttgatgaactcattggtttcacaagtcatttgcgatgta
ctgtttttgattggccagtcatga
DBGET
integrated database retrieval system
