Orcinus orca (killer whale): 101275795
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Entry
101275795 CDS
T05247
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101275795 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101275795 (YBX3)
03041 Spliceosome [BR:
oor03041
]
101275795 (YBX3)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
101275795 (YBX3)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101275795 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
101275795
NCBI-ProteinID:
XP_004281220
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All DBs
Position
11:complement(8641450..8664561)
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AA seq
371 aa
AA seq
DB search
MSEAGEATTTTTTLPQAPAEAAAAAPQDPAPKSPAGGGGAPQAPAPAPAALVAGNPGVDA
APADPGTAAPASSAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQT
AIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGY
YGRRRGPPRNCAGEEEEGSGSEGFGASAADGQLAGALSQRRRPQYRPQYRPQYPRRFPPY
HVGQTSDRRSRVFPQPNGTQAGEIGEMKDGVPEGAQLQGPVHRNPTYRARYRRGPPRPRP
APAVGEAEDKENQEAANGPNQPPARRGYRRPYNYRRRPRPPNAPAQDGKETKAGEAPSEN
PAPAPEQSSVE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgggcgaggccaccaccaccactaccaccctcccgcaggctccggcggag
gcggccgccgcggccccccaggaccccgcgccgaagagcccggcgggcggcggcggcgcg
ccccaggccccggccccggcgcccgccgccctggtcgcaggcaaccccggcgtggacgcg
gcccccgcggacccgggcaccgcggcccccgcctcttcggccgccgcgggcagtgaagac
gcggagaagaaagttctcgccaccaaagtccttggcactgtcaaatggttcaacgtcaga
aatggatatggatttataaatcgaaatgataccaaagaagatgtattcgtacatcagact
gccatcaagaagaataacccacggaaatatctgcgcagtgtaggagatggagaaactgtg
gagtttgatgtggttgaaggagagaagggtgcagaagcagccaacgtgactggcccagac
ggcgttcctgtggaagggagccgatatgctgcagatcggcgccgctacagacgcggctac
tacggcagacgccgtggaccgccccgtaattgcgctggggaggaggaggaagggagcggc
agcgaaggatttggcgcctcagccgctgacgggcagctcgctggggccctgagtcagcgg
cgccgcccccagtaccgcccccagtaccgtccccagtacccgcggcgcttcccgccttac
cacgtgggacagacctctgaccgccgctcccgggtctttccccaacccaacggaacgcag
gcgggtgagattggagagatgaaggatggagtcccagagggagcacaacttcagggacca
gttcatcgaaatccgacttaccgcgcaaggtaccgtaggggccctcctcgcccacgacct
gccccagcggttggagaggctgaagataaagagaatcaagaagcggccaatggtccaaac
cagccacctgctcgccgtggataccggcgcccctataactatcggcgtcgcccccgtcct
cctaatgctcctgcacaagatggcaaagagaccaaggcaggtgaagcaccatctgagaac
cctgctccagcccccgagcagagcagtgtcgagtaa
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integrated database retrieval system
