Orcinus orca (killer whale): 101276005
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Entry
101276005 CDS
T05247
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oor03037
]
101276005 (RP1L1)
04812 Cytoskeleton proteins [BR:
oor04812
]
101276005 (RP1L1)
Cilium and associated proteins [BR:
oor03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101276005 (RP1L1)
Cytoskeleton proteins [BR:
oor04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
101276005 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
101276005
NCBI-ProteinID:
XP_049567295
LinkDB
All DBs
Position
6:13575175..13585178
Genome browser
AA seq
1931 aa
AA seq
DB search
MNGTPRDAQAPGQRERLLPSVARTPSVTQVMPAKKITFLKRGDPQFAGVRLAVHRRAFRS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLSTLEQLQDGGCYLCSDKKPPKTPSGPGRPR
GRSPSQQSRGFEGCCEAPGTASSCKSLRAPRRITLVKNGDPRYQQTAVLSHRNTRSLTAF
LSKASDLLHFPVKQVYTTGGKKVDSLKGLLHSPSVLVCAGHEPFRPLAAEDVRRNGSEPL
SGQTSRRKSGSWGPKAKQSVIHARSRPGSGPRRFSLLSERSGLGDPSVPLQSACTCPAPD
GNPQGTPGHLSPSVAGEDIEKNVRVNEDGSLSVEMKVRFHLQGEDLLLWSRRVGRASGEG
PVLGEADPLGCVWSGPPRDPSEPGAQGLGPCEAGGVGAFDRGRWQPGSRYEIWMNPLYAP
QGEQTASQRRSGLPQKSHSRNPRSQGVASRKRRSKDSASPSSSDRAPEGSETNSSFCSRS
LEDGVGSCGPRLASGAGEGTGEGAMPGRREHRGCLKPGTRGPADAFPDSSASGGSHEESS
ERGELHQGRPSKKSWAVTSWGATQGGGPSSPAVSPSSVRKEGPWAEESGQGAGYPRAASG
EDAGGHRPPSACASAPGRSRKQQSRAGTLSLPSVSVLSRGSQRGRPGQHHHPKDTHCPLD
LPVSRPVPGPPSRGRARPDSPAPGPSESPHSRGSRASRDPGPCFSASLYSWDTRGFSSIP
ITPVSNSDCASNFHPPNSPAAETEGDPEFRACSPAPTPSNTSDSFNLQADGLGEKAGGDS
PKPSWPLVLPVGWPEGGRPGVHGASCCSQLGASPALGSPGGKTQSLPASQPWGGQGPFSE
ACLVCSGYCPVPRKPRPSGKKHPLHTLSHSEGTHSADGEPGGTEAGEEKPDVWRPRPPGS
PGGAAGRAVRAVRRGGSHRGPKLGRTFQEQVSGGGDPEEQKEGGYVMLGALPRASPGAVV
REWLSNISEEPVKYEMADEGEDLAGRSPEGPEEDPVDQHPPDGLEGSVQARQLPLEGAAS
EKAEPDAALPGTGSASPRSGAGLPCSGVSEASTEAGKGKVAAVDRAMGQCVLPSRVSSSI
HIMKALMGSRPGRPSSVPEVSSSVGRRLGRSAQALVTCLARLRFFDDDLGSPAGKVRFTD
SPRYQELLSTLQALWPGSGLGHRELDSGLQELGWGQALPALGSHAAAEDFTPTSSSGVDV
GSGSGGSGEGHAPCTVDCALVPERMGLPSSIPCQRTDSRISGNPEDPGNQRPSGSEAGGT
SSEDRAERNSGEQALGSDLDQSVKNTMQEEGVQLEEIKEEKERAELQEEGVKGFPEEEGI
TGRESSGAGSQDGAGAREDKSLQEEQGDPTSATLSPPGKRESPTERPKSLGESDPDASGS
QGGPNAEPSLEKLSTAAETGCGQTQAKLTQGAEERGTPTARRGPLDPDPLWVSKLLKNME
KAFMAHLATATAELQARWGLESNDLLDQMVAELQQDMGRRLQDHIEKELRKVQSRAGGTA
PGSPREALHWETPLQTKQYRQHLQGLSDLSASSEHMRGRGPPSFSLEDMPTFRGVLGTRL
GEQVEEEGFCPCEACMRKKVALASPRDAVRAASAPVREAFDLQQILQKKKGRYVDGETAE
AAPAKRGMEPLERDPSGTDPVRGADGGPELGSGQGPGVEVGHETLSRDEAPRGAEEGATT
EKRERKTDCFVGSYPDGVGWGQQGVGREEGDPEVGSGAEDTGAGEAPGGGDPSPGGQNAG
AESAEAQGADGEQQAESGGGNQGKREARPQLGLGHRQSREASRNSSPDQEGRPTPSLAPG
ADSPRQRSGLSSSSASSLGNCSRLSQKSSEDEPSDRHTRSLEDEAKGVPDPETKVTGTCP
ESSPSEQDGAPSGSRMPEQGTDEGPTPEQGTEGGSDLEAEKVVKSLASTEVMLKTLPMDR
TDGFGQDDLDF
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaccccgagggatgcccaggcccccggacagcgcgagcgcctcctgccttct
gtggcccggaccccctctgtcacccaggtcatgccagccaagaagatcactttcctcaag
cgaggggatccccagtttgctggggttcgcctggccgttcaccgacgcgccttcaggagt
ttcggggccctgatggacgagctgtcgcagcgcgtgccgctctcctttggggtgcgctcc
gtcaccacgccccggggcctgcacggcctcagcaccctggagcagctgcaagacggcggc
tgctacctctgctccgataagaagccccccaagacccccagcgggccgggccggccacgg
gggagaagcccttctcagcagtcacggggttttgaaggctgctgcgaggcacctggaacg
gcttcttcctgcaaaagtctccgagccccgaggaggataacgctggttaagaacggcgac
cctcgataccagcagacagcagtgctcagtcacaggaacaccaggagcctgacggccttt
ctcagcaaagcctcggacctgctgcactttcccgtgaagcaggtgtacacaaccggtggg
aaaaaggtggactctctgaagggtctgctacacagcccctcggtgctggtatgtgccggt
cacgagcccttcagacctctggcagcggaagatgtcagaagaaatggaagtgaaccttta
tctgggcagacttcaaggaggaaaagcgggagctgggggcccaaagccaagcagagcgtg
atccacgcgcggtccaggccaggcagcgggccgcggcggttctccttgctgtcggagaga
tctgggctcggtgacccctcggtgcctctgcaaagtgcctgcacgtgccctgctcctgac
gggaaccctcagggcacacctggccatctcagcccgtcggtagccggtgaagacattgag
aagaacgtgcgcgtgaacgaggacggcagcttgtccgtggagatgaaagtccgcttccac
ctacagggggaggacctgctcctgtggtccaggagggtcgggagggccagcggggagggc
cctgtcctgggggaggcagatcccctcggctgtgtgtggagtggcccccctagggacccc
tcggagcctggggcacagggactggggccctgcgaggcaggaggtgtgggagcctttgac
cgaggccggtggcagccggggtctagatatgagatctggatgaaccccctttatgccccc
cagggagagcagacagcctctcagaggaggtctgggctgccccagaagtcccactccagg
aaccccaggagccaaggggtcgccagcaggaaaagaaggagcaaagacagcgccagccct
tcctccagtgacagagcccctgaaggctctgagaccaactcttctttctgctccaggtcc
ctggaggatggtgtgggcagctgtggcccacgtctggcctcgggggctggtgagggcaca
ggcgagggagcaatgccgggccgcagggagcaccgtggctgcctgaaaccggggacccga
ggcccggcagatgcttttcctgactcctcggcaagtggcgggtctcacgaggagtccagt
gaaaggggtgaactgcaccagggccgccccagtaagaagagctgggctgtgacttcctgg
ggggccacccaggggggaggccccagctcccccgccgtgagcccctcgtctgtaaggaaa
gagggcccatgggcagaggagagtggacagggcgccggatacccccgggcagcctctggg
gaggacgcaggaggccaccgtccaccttctgcctgtgcgtcagccccaggcaggagcagg
aagcagcagagcagagccggcaccctgtccttacccagcgtttctgtcctcagccgcggg
tcccagaggggccgccccgggcagcaccaccacccaaaggacacccactgcccactcgac
ttgcctgtgtccaggccagtgccggggcctcccagcagaggcagggcccgcccagacagc
ccagcgcctggcccttcggagagcccacacagccgcgggagccgggcctcccgggacccg
gggccctgcttctccgcctctctttattcctgggacacgcgagggttcagcagcattccc
atcacccctgtgagcaattctgactgtgcttccaatttccaccccccaaattcccccgct
gctgagaccgaaggggaccctgagttcagggcgtgttcaccagctcccacaccttcaaac
acgtctgactctttcaacttgcaagctgatggcctgggtgaaaaggcagggggtgacagt
cccaagccttcctggcccttggtcctgccagtcgggtggcccgagggagggaggccggga
gtgcacggggccagctgctgctcgcagctgggcgcatccccggccctcgggtcccccggt
gggaagacgcagtcgctgccagcctcccagccttggggcggccagggccccttctctgag
gcctgcttggtgtgcagtgggtactgtcccgtgcctcgcaagccacggccctcgggcaag
aagcatcctttgcataccctcagccacagcgagggcacccacagtgctgatggggagccg
ggagggaccgaggcaggggaggaaaagccggacgtctggcgccctcggccccctggctct
ccgggaggggccgcggggagagcagtcagagccgtgagaaggggtggctcccaccgcggt
cccaagctcgggagaacgttccaggagcaggtctcgggtggaggagacccggaggagcaa
aaggaaggtggctacgtgatgctgggcgccctgccccgagcctccccgggagccgtggtc
cgtgagtggctgagcaacatctcggaggagcccgtgaaatacgagatggcggacgagggc
gaagacctggctgggcgcagcccggaaggccccgaggaggaccctgttgaccaacatccc
ccagatggcctggaagggtcagtgcaggccagacaattgcccctggaaggggcggccagt
gagaaagcagaaccagatgcagccctcccagggacgggcagcgccagtcccaggtcagga
gcgggcctgccttgcagtggggtttcggaagcctctacggaggccggcaaaggcaaagta
gcggctgtggaccgtgcgatgggccagtgcgtgctccccagcagggtctcttcctccata
cacatcatgaaggcgctgatgggatccaggccaggccggcccagcagtgtgcccgaagtg
tccagctcagtgggcaggagactcggccgctcggcccaggccctcgtcacctgtctcgcc
aggctccgcttctttgatgatgaccttgggtctcccgctggcaaagtgaggttcacagac
tctcctcggtaccaggagctcctgagcaccttgcaggccctgtggccggggagtggcctt
gggcacagagagctggactcgggcctccaggagctaggctggggccaggccctgccggcc
cttgggtcccacgctgcagctgaggacttcacgccaacgtcctcctctggtgtggatgtt
ggcagtggttccggaggctcgggggagggccacgcgccctgcaccgtggactgcgccctg
gtccctgagaggatggggctgccctcaagcatcccctgccagaggactgattccagaatc
tcagggaacccagaggatccaggaaaccaacggccgagtggttccgaggctggtggtacc
tccagtgaggacagggccgaaagaaacagtggggaacaggcgttgggcagtgacctggac
caaagtgttaaaaacacgatgcaagaagagggggtacaattagaggaaataaaagaggaa
aaagaaagagcagaactgcaagaagagggtgttaaagggtttcccgaagaggaaggaatc
acaggacgagaatcgtcaggggcgggctctcaggatggggcgggtgccagggaagacaag
agcctgcaggaagagcagggagaccccacctcggccacgctgagccccccagggaagaga
gagagcccgacagagcgccctaagagcctcggggagagtgacccagacgccagcgggagt
caaggtggccccaacgctgagccttctttggagaagttgtccacagcagctgagacaggc
tgtgggcaaacccaggccaagcttacccagggggcggaggagaggggcactcccacagcc
cgcagagggcctctggaccctgaccccctctgggtgtccaagttgctgaagaacatggag
aaggccttcatggcccacctcgccacggccacggccgagctccaagcccgctggggcctg
gagagcaacgacctgctggaccagatggtggccgagctgcagcaggacatgggccggcgg
ctccaggaccacatcgagaaggagctccgcaaggtgcagagccgggcagggggcacggcg
ccggggtcacccagggaagccctccactgggagacgcccctgcagaccaagcagtacagg
cagcacctccagggcctgagtgacctctcagcttcctccgagcacatgcggggccggggg
cccccctccttctccctggaggacatgccaaccttcagaggagtcctggggacccggctc
ggggagcaggttgaggaggaggggttctgtccctgcgaggcctgcatgaggaagaaagtg
gcccttgcatctccgagggacgcagtgcgggcggccagtgcgcccgtcagagaggccttt
gacctgcagcaaattctgcagaagaagaaaggaagatatgtggacggggagaccgcagag
gcggcccctgcaaagagggggatggagcccctcgagagggacccctcggggacggaccct
gtccggggagctgacggaggccctgagctgggatcaggccagggccccggggtggaggtg
gggcacgagaccctcagcagagatgaagccccccggggggcagaggagggggcaactact
gagaagagagaaaggaaaacagactgctttgtaggcagctacccagacggggtggggtgg
gggcagcagggtgtgggcagggaggaaggagacccggaggtgggctccggggctgaggac
actggggcgggtgaagccccgggaggaggtgacccgagtccaggaggacagaacgctggt
gcagaaagtgcagaggcccagggagctgatggggagcaacaggcagagtcaggaggagga
aatcaaggtaagagagaagcgcgccctcagcttggcctcggacaccgccagtcgcgtgag
gcttctagaaacagcagcccagaccaggagggcaggcccacgccgtccctggccccaggt
gcagactctccccgccaaaggtcaggcctctcgtcctccagcgcatcatctctggggaac
tgctctcggctctctcagaaaagctccgaagatgagccttcagacagacacacgaggagc
cttgaagacgaggccaagggcgtccctgatccagagacaaaagtcacaggcacgtgtcca
gaaagctccccttctgagcaagacggggccccctcaggctcgaggatgccagagcaagga
acagatgaaggtccgactccagagcaggggacagagggaggctctgacttagaagctgag
aaggtagtgaaaagtcttgcttccacagaagtgatgcttaaaaccctccccatggacagg
acagatggctttggccaagacgacttagatttctaa
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