Orcinus orca (killer whale): 101278217
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Entry
101278217 CDS
T05247
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor04714
Thermogenesis
oor05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101278217
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101278217
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101278217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101278217
03036 Chromosome and associated proteins [BR:
oor03036
]
101278217
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101278217
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101278217
PBAF complex
101278217
GBAF(ncBAF) complex
101278217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
101278217
NCBI-ProteinID:
XP_004266273
LinkDB
All DBs
Position
4:93317576..93319270
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AA seq
548 aa
AA seq
DB search
MPAGQPGGRAGGRGARGSRGVPVPVVCAAGAVALGKMVARAGFQSVAPSGGAGASGGAGA
AAALGLGGPPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGK
PSVLPGLAQSGMDQSLKRPAPQQVQQQAVQNRNHNAKKKKMTDKILPQRIRELVPESQAY
MDLLAFERKLDQTIMRKQLDIQEALERPIKKKRKLRIFISNTFNPAKSDAEDGEGTVASW
ELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQET
DGFQVKRPGCVNVRCTVLLMLDYQPPQFKLDPSLALLLGIHTQTRPVIIQALWQYIKMRK
LQDPHEQEFVICDKYLQQIFESQPMTFSEIPQQLHALLMPPEPIIINHVISVDPNDQKKT
ACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQQEFMLSFARD
PQGFINDWLQSQCWDLKTMTDVMGNPEEEHRAEFYFQPWAQEAVCRCFCSKMQQRRQELD
QALGIRNT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgggccagccgggcggccgggctggcgggcggggagcgcgggggtcgcgggga
gttccggttccggttgtttgtgcagctggagcagtggctctgggaaagatggtggcccgg
gcgggtttccagtctgtggctccgagcggcggcgctggagcctcaggaggggcgggcgcg
gcggctgccctgggtctgggcgggcctccggggcctccggtgcgaatgggcccggcgccg
ggtcaagggctgtaccgctccccgatgcccggagcggcctatccgagaccaggtatgcta
ccaggcagccgaatgacacctcagggaccttccatgggaccccctggctatggggggaaa
ccttcagtcctacctggcctggcccagtcagggatggaccagtccctcaagagacctgca
cctcagcaggtccagcagcaggcagtccaaaatcggaaccacaatgcaaagaaaaagaag
atgactgacaaaattctacctcaaaggattcgtgaactggtaccagaatcccaggcctat
atggatctcttggcttttgaaaggaaactggaccagactatcatgaggaaacagctagat
atccaggaagccttggaacgtcccatcaagaaaaaacggaagctgcgaattttcatttct
aacactttcaatccggctaagtcagatgctgaggatggggaagggacggtggcttcctgg
gagcttcgggtagaaggacggctcctggaggattcagccttgtccaaatatgatgccacc
aaacaaaagaggaagttctcttctttttttaagtccttggtgatcgaactggacaaagac
ctgtatgggccagataaccatctggtggaatggcacaggaccgccactacccaggagaca
gatggcttccaggtgaagcggccaggatgtgtgaatgtacggtgtactgtcctgctgatg
ctggattaccagcctcctcagtttaaattagaccctagtctggctctgctgctgggcatc
cacacccagacccgtccagtgatcattcaagcactgtggcaatatattaagatgcgtaag
ctccaggacccacatgagcaggagtttgttatctgtgacaagtacctccagcagatcttt
gagtctcaacctatgacgttttcagagatcccccaacagctccacgccttgcttatgcca
ccagagcccatcatcattaatcatgtcatcagtgttgacccgaatgatcagaaaaagaca
gcttgttatgacatcgatgtggaagtggatgataccttgaagacccagatgaattctttt
ctgctgtctactgccagccagcaggagattgctactctagacaacaagatccatgagaca
atagaaactatcaatcagctgaagacccagcaagagttcatgctgagctttgccagagac
cctcagggtttcatcaatgactggcttcagtcccagtgctgggacctcaagaccatgact
gatgtgatgggtaacccagaagaagagcaccgagctgagttctacttccagccttgggca
caggaggctgtgtgccgatgcttctgctccaagatgcagcagagacgacaagaattagat
caagccctgggaatccgaaacacatag
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