Orcinus orca (killer whale): 101278704
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Entry
101278704 CDS
T05247
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101278704 (COL8A2)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101278704
NCBI-ProteinID:
XP_004266513
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All DBs
Position
1:183914059..183937317
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AA seq
707 aa
AA seq
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MRGALTSLSSLPPPLLLLLLLLVLGCGLRAAASGGAAGAAGYPPVQYVQPMHKGPVGPPF
REGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGLHGQPGPAGP
PGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGIAVPGKPG
PQGVPGPPGFGGEPGPQGEPGPPGDRGLKGENGVGQPGLPGAPGQGGAPGPPGLPGPAGL
GKPGLDGFPGAPGDKGESGPPGLPGPRGEPGALGPKGPPGLDGMGVPGSAGVPGPQGPRG
AKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGL
GGPPGLPGSAGLPGRRGPPGPKGETGPGGPPGVPGIRGDQGPSGLAGKPGLPGERGLPGA
HGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPTGPIGP
QGLPGLKGEPGLPGAPGEGKVGEPGMAGPTGPPGVPGSPGLTGPPGPPGPPGPPGSPGAF
DETGIAGLHLPNGGVQGAVLGKGTKPRFGLGELSAHATPAFTAVLTSPFPASGMPVKFDR
TLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYL
DQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggctctgacgtccctgtcttcgctgccgccgcctctgctgctgctgctgctg
ctgctggtgctggggtgcgggctgagggcggccgccagcggtggagccgccggggcagcg
ggctacccgccggtgcagtacgtgcagcccatgcacaaaggacccgtggggccgcccttc
cgcgagggcaagggccaatacctggaaatgcctctaccgctgttgccaatggacctgaaa
ggagagcctggtcccccaggaaaacctggacctcggggtccccctggccctcctggcttc
ccaggaaaaccaggcactggaaaaccagggctacatgggcagcctggacccgctggcccc
cctggcttctcccggatgggcaaggctggtcccccagggcttccaggcaaggttggccca
ccagggcagccagggcttcggggggagccagggatacgaggggaccagggcctccggggg
cccccagggccccctggcctacctgggccctcaggcattgctgtccctggaaaaccaggt
cctcagggggtgccagggcccccaggatttgggggggagccagggccccagggagagcct
gggcccccgggtgatcgaggcctcaagggcgaaaatggagtgggccaaccagggcttcct
ggagccccaggccaggggggtgcccccggaccccctggtctccctggtccagctggcttg
ggcaaaccaggtttggatgggtttcctggggcccctggagataagggtgagtctgggcct
cctgggctgccaggacccaggggggagccaggagctttgggcccaaaagggccccctggg
ctggatggtatgggggtaccagggtcagcaggggtgccagggccacagggcccacgaggg
gccaaaggggagccaggcacccggggccctcctggcctgataggccccactggctatggg
atgccagggctgccaggtcccaagggggacaggggcccagctggggtcccggggctcttg
ggggacaggggcgagccaggtgaggatggggagccgggggaacagggaccacagggcctt
gggggcccccctggacttccggggtctgcagggctacctggccgacgtgggcccccgggg
cctaagggggagacggggcctggaggacccccaggagtgcctggcattcggggtgaccag
gggcctagtggcctggctgggaaacctgggctcccaggagagagggggcttccaggggct
catggacctcctggaccgactgggcccaaaggcgagccaggtttcacgggccgccctgga
ggaccaggggtggcaggagccctggggcagaagggtgacttggggctccctgggcagcct
ggcctgagaggcccttctggaatcccaggactccaaggtccgactggccctatcgggccg
cagggtctgccaggcctgaagggtgaaccaggcctgccgggggcccctggagaggggaaa
gtgggagaacctggcatggctgggcctacagggcctcctggggtcccaggttccccagga
ctcacgggccctcctgggcctcccggacctcccgggccccctggttcacctggggccttc
gatgagactggcatcgccggcctgcacctgcccaatggcggcgtgcagggagctgtgctg
ggcaaggggaccaagccccggtttgggctgggcgagctgtcggcccatgccacgcccgcc
ttcaccgctgtgctcacctcgcccttccccgcctcaggcatgcctgtgaagtttgaccgg
accctctacaatggccacagtggctacaacccggccaccggcatcttcacctgccccgtg
ggcggggtctactactttgcttaccacgtgcacgtcaagggcaccaacgtgtgggtggcc
ctgtacaagaacaacgtgccagccacctacacctatgacgagtacaagaagggctacctg
gaccaggcgtctgggggggccgtgctccagctgcggcccaacgaccaggtctgggtgcag
atgccctcggaccaggccaatggcctctactccaccgagtacatccactcctccttttca
ggattcttgctgtgccccacataa
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