Orcinus orca (killer whale): 101279053
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Entry
101279053 CDS
T05247
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X2
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04010
MAPK signaling pathway
oor04020
Calcium signaling pathway
oor04713
Circadian entrainment
oor04925
Aldosterone synthesis and secretion
oor04927
Cortisol synthesis and secretion
oor04929
GnRH secretion
oor04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101279053 (CACNA1H)
04020 Calcium signaling pathway
101279053 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101279053 (CACNA1H)
04925 Aldosterone synthesis and secretion
101279053 (CACNA1H)
04927 Cortisol synthesis and secretion
101279053 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
101279053 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101279053 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101279053 (CACNA1H)
Ion channels [BR:
oor04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101279053 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
DUF4834
Motif
Other DBs
NCBI-GeneID:
101279053
NCBI-ProteinID:
XP_033285111
LinkDB
All DBs
Position
16:50396312..50423995
Genome browser
AA seq
2236 aa
AA seq
DB search
MLVIMLNCVTLGMFRPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMIALGLFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSTFARNSNLSFLRPYYQPEEGEE
NPFICSSRRDNGMQKCSHIPSRRELRVECTLGWEAYGQPQAEGAGGTGHHTCINWNQYYN
VCRSGDSNPHNGAISFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIV
GSFFMINLCLVVIATQFSETKQRESQLMREQRARYLSNDSTLASFSEPGSCYEELLRYVG
HVCRKLKRRGLRLYARWQSRWRKKVDPSGVPHGQGAGWRPRRAGGRATSIHHLVYHHHHH
HHHHYHFSHGSPRRPGPEPGGSDTRLVRAGAPPSPGHGPPDAESVHSVYHADCHVEGPQE
RARAAHAVATAAAGLKLATGLGAMNYPTILPSAAGSGKGGPGPKGKRPGGPLGAGGHSPL
SLSSPDPCEKIQHLVGEHGLGQAPSRLSGLSVPCPLPSPQAGTLTCELSSCPYCTSALED
PELEFSDSDSGDSDSNGVYEFTRDVRHGDHRDPMQPPPAADTPDSGGTRRRAQRRAVAGE
QGGLGRVWASFSGKLCRIVDSKYFNRGIMVAILTNTLSMGIEYHEQPDELTNALEISNIV
FTSMFALEMLLKLLAFGPLGYIRNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRV
LKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTV
PDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLV
AILVEGFQAEGDATRSDTDEDKTSTHLEEDLDKFRDLRATEMKMYSLAVTPNGHLEGQAS
LPPPLIMRTAATPMPTPKSSPHLDAAPGLLDSRRGSSSSVDPQLGDQKSLSSLRSSPCTH
WGPNSAWSSRRSSWNSLGRAPSLKRRSQCGERESLLSGEGKGSGSTDEEAEDSRPGVGAS
PDTRATLLRRTESLDHRSTLDLRPLRPAALLPTKLHDCNGLALPSELFLRIDSHKEDTAE
FDDDVEDSCCSRLQKVLEPYKPECCRSREPWALYLFSPQNRLRISCQKIIAHKMFDHVVL
VFIFLNCITIALERPDIDPGSTERVFLSISNYIFTAIFVAEMMVKVVALGLVSGEHAYLQ
SSWNILDGLLVLVSLVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVE
TLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECWAAHYRWV
RRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISFLLI
VSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRQRRLERKRRKAQRRPYYADYSPTR
RSIHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLK
LVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLK
LLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSR
HATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDRHCLSYLPAISPIYFVTFVLVA
QFVLVNVVVAVLMKHLEESNKEAREDAELDAEVELEMAQGPSARPRPTALPSPGASPDAP
NLLVVRKVSVSRMLSLPNDSYMFRPVAPAAAAHPHPLQEVEMETYVGASGTSGPVTAHLP
PVESCPSLQVPSAMSSPARGGDTLRALTPLGAARSPSLSRLLCTQEVVCTESLEGQVDGP
RDSSSGWGEPGGKTPVRQAPLGPSLRSPPCSPRPTSIRIRKHTFGQNYISSRPPVLGAEE
AEAPDPADEEVSHITSSAHSPSASPAACGVVGGEPDLHRLYSVNAQGFLDQPGWADEQRR
PSVEQGCGDSRPEAGEVKTRALEAELALGARRKKKMSPPCISIEPPAEDEGAARAPAAEG
GSTTLRRRTPSCEAVPHRDPLEPADSAGLDTAAKGERRVQVPCRTEHLTIPNFAFEPLDV
GGPRGDLFLDGGHGVAPEPRPSSSGITAPPEPQQTEPPVASGDPPEEGWGLHLTVPESPL
KKGSTPVLGDSVDKPV
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcatgctcaactgcgtgaccctgggcatgttccgcccctgcgaggacgtc
gagtgccgctcggagcgctgcagcatcctggaggcgtttgacgacttcatcttcgccttc
ttcgcggtggagatggtcatcaagatgatcgccctcgggctgttcgggcagaagtgctac
ctgggcgacacgtggaacaggctggacttcttcatcgtcatggcgggcatgatggagtac
tctctggatggacacaacgtgagcctctcggccatccggacagtgcgtgtgctgcggccc
ctccgtgccatcaaccgtgtgcccagcatgaggatcctggtcacgctgctgctggacacg
ctgcccatgctcgggaacgtcctcctgctctgcttctttgtcttcttcatcttcggcatc
gtgggtgtccagctttgggctggactgctgcgcaaccgctgcttcctggacagcaccttc
gccaggaacagcaacctcagcttcctgcggccatactaccagccggaggagggtgaggaa
aaccccttcatctgctcctctcgccgggacaacggcatgcagaagtgctcgcacatcccc
agccgccgcgagctgcgcgtggagtgcacgctgggctgggaggcctatgggcagccacag
gccgagggcgcaggtggcacgggccaccacacctgcatcaactggaaccagtactacaat
gtgtgccgctcaggcgactccaacccacacaacggggccatcagcttcgacaacatcggc
tatgcctggatcgccatcttccaggtgatcacgctggagggctgggtggacatcatgtac
tacgtcatggacgctcattccttctacaacttcatctacttcatcctgctcatcattgtg
ggttccttcttcatgatcaacctgtgcctagtggtgatcgccacgcagttctcggagacg
aagcagcgggagagccagctgatgcgggagcagcgggcccgctacctgtccaacgacagc
acgctggccagcttctcagagcctggcagctgctatgaggagctcctccggtacgtgggc
catgtgtgccgcaagctgaagcgccgtggcctccgcctctatgcccgctggcagagccgc
tggcgcaagaaggtggaccccagcggcgtgccgcacggccagggcgctgggtggcggcca
cggcgggcgggagggcgcgccacctccatccaccatcttgtgtaccaccaccaccaccac
caccaccaccactaccacttcagccatggcagcccacgccggccaggccccgagccaggc
ggcagtgacaccaggctggtgcgggccggagcacctccctcgcccggacatgggccccct
gacgctgagtcagtgcacagcgtgtaccatgcagactgccacgtggaggggccacaggag
agggcccgggcggcacatgctgtggccaccgccgccgccggcctcaagctggccactggg
ctgggcgccatgaactaccccaccatcctgccctcggccgcaggcagtggcaaaggtggc
cccgggcccaaggggaagcgtcctggtggacccctgggagccggggggcacagcccactg
agcctgagcagccccgacccctgcgagaagatccagcatctggtcggggagcacggactg
ggccaggcccccagccgtctgtcaggcctgagcgtgccctgccccctgcccagcccccag
gcgggcacgctgacctgtgagctgagtagctgcccgtactgcaccagcgccctggaggac
cccgagctggagttcagcgactcagacagtggagactcggacagcaacggggtctacgaa
ttcacacgggatgtgcggcatggagaccaccgtgaccccatgcagccacccccagcggcg
gacacgccagactcaggaggaacgcggcggagggcacagcgtcgggcggtggcaggcgag
cagggagggctgggccgtgtctgggcctcctttagcggcaagctgtgccgcatcgtggac
agcaagtacttcaaccgcggcatcatggtagccatcctcaccaacacgctgagcatgggc
atcgagtaccatgagcagcctgacgagctgaccaacgccctggagatcagcaacatcgtg
ttcacgagtatgtttgccctggagatgctgctgaagctgctggcctttggtccgctgggc
tacatccggaatccctacaacatcttcgatggcatcatcgtggtcatcagcgtgtgggag
atcatcgggcaggcagacggcgggctgtcggtgctgcggacctttcggctgctgcgggtg
ctcaagctggtgcgcttcatgcccgcgctgcggcgccagctggtggtgctcatgaagacc
atggataacgtggccactttctgcatgctgctcatgctgttcatcttcatcttcagcatc
ctcggaatgcacctgtttggctgcaaattcagcctgaaaacagacactggagacacggtc
cctgacaggaagaactttgactccctgctgtgggccatcgtcacagtgttccagatcctc
acccaggaggactggaacgttgtcctctacaacggcatggcctccacctcctcctgggct
gccctctacttcgtggccctcatgacctttggcaactacgtgctcttcaacctgctggtg
gccatccttgtggagggcttccaggcggagggtgatgccaccaggtccgacacagatgaa
gacaagacctccacccacttggaggaggacttggacaagttcagagacctcagggccaca
gagatgaagatgtactcgctggcggtgacccccaacgggcacttggagggccaggccagc
ctaccccctcccctcatcatgcgcacggcagccacacccatgcccacccccaagagctcc
ccacacctggatgcagcccctggcctcctggactcacgacgtggcagcagcagctccgtg
gacccccagctgggggaccagaagtctctgtccagcctccgcagctcgccctgcacccac
tggggccccaacagcgcctggagcagccggcgctccagctggaacagcctgggccgcgca
cctagcctcaagcgcaggagccagtgcggggagcgtgagtcgctgctgtccggcgagggc
aagggcagcggcagcacagacgaggaggccgaggacagcaggcctggtgtgggagcctcg
ccagacacacgtgccacactgctgcggcgcaccgagtccctggaccaccgcagcacgctt
gacctgcggcccctgcggccggctgccctgctgcccaccaagctccacgactgcaacggg
ctggccctgcccagtgagttattcctgcgcatcgacagccacaaggaggacacggccgag
tttgacgatgatgtggaggatagctgctgctcccggctgcagaaagtgctggagccctac
aagcccgagtgctgtcggagccgcgagccctgggccctgtacctcttctccccacagaac
aggctccgcatctcctgccagaagatcattgctcacaagatgtttgatcacgtcgtcctg
gtcttcatcttcctcaactgcatcacgatcgccctggagaggcccgacattgaccccggc
agcaccgagcgcgtcttcctcagcatctccaactacatcttcacggcgatcttcgtggcc
gagatgatggtgaaggtggtggccctgggcctggtctctggtgagcatgcctacctgcag
agcagctggaacatactggatgggctgctggtcctggtgtccctggttgacatcatcgtg
gccatggcgtcggccggtggtgccaagatcctgggcatcctgcgtgtgctgcgcctgctg
cggacactgcggcccctgcgggttatcagccgtgccccaggcctcaaactggtggtggag
actctgatatcgtcactcaggcccatcggaaacattgtcctcatctgctgtgccttcttc
atcatcttcggcatcctaggggtgcagctcttcaaggggaagttttactactgcgagggc
gctgacaccaggaacatctccactaaagccgagtgctgggctgcgcactaccgctgggtg
cgacgcaagtacaacttcgacaacctgggccaggcgctgatgtccctgttcgtgctctca
tccaaggacggatgggtgaacatcatgtacgacgggctggacgccgtgggcatagaccag
cagccggtgcccaaccacaacccctggatgctgctctacttcatctccttcctgctcatc
gtcagcttctttgtgctcaacatgttcgtgggcgtcgtggtggagaacttccacaagtgc
cggcagcaccaggaggccgaggaggcgcggcggcgggaagagaagcggcagcggcgcctg
gagaggaaacgcaggaaggcccagcgccggccctactatgcggactactcacccacgcgt
cgctccatccactctctgtgcaccagccactatctggacctcttcatcaccttcatcatc
ggcgtcaacgtcatcaccatgtccatggagcactataaccagcccaagtctctggacgag
gccctcaagtactgcaattatgtgttcaccatcgtcttcgtctttgaggccctgctgaag
ctggtggcgtttgggttccggaggtttttcaaggacaggtggaaccagctggacctggcc
atcgtcctgctgtccatcatgggcatcacactggaggagatagagatgaacgcggcgctg
cccatcaaccccaccatcatccgcatcatgcgcgtgctgcgcatcgcccgcgtgctgaag
ctgctcaagatggccacgggtatgcgggccctgctggacacagtggttcaggcgctgccc
caggtagggaacctcggcctgcttttcatgctcctgttttttatctatgctgccctggga
gtggagctgtttgggaggctcgagtgcagtgaggacaacccctgcgagggcctgagtaga
cacgccaccttctccaactttggcatggctttcctcacactgttccgcgtgtccacgggg
gacaactggaacgggatcatgaaggacacgctgcgggagtgtgcccgtgaggacaggcac
tgcctcagctacctgccggccatctcgcccatctacttcgtcaccttcgtgctggtggcc
cagttcgtgctggtcaacgtggtggtggccgtgctcatgaagcacctggaggagagcaac
aaggaggcccgcgaggatgccgagctggacgcggaggtcgagctggagatggcgcagggg
ccctccgcccgccccaggcccacggccctgccgagcccaggtgcctcgccggacgccccc
aacctgctggtcgtgcgcaaggtgtctgtgtccaggatgctctcactgccaaacgacagc
tacatgttccggcccgtggcacccgctgcggccgctcatccccacccgctgcaggaggtg
gagatggagacctacgtgggcgcctcgggcacctcgggcccagtcaccgcccacttgccg
cctgtggagtcctgcccatccctccaggtcccgtcggctatgtcctccccggccaggggc
ggcgacaccctccgtgccctgacccctctgggtgcagcccgctcccctagtctcagccgg
ctgctctgcacacaggaggtagtctgcacagagtccctagaagggcaggtcgatggtccc
agggacagcagctcgggctggggagagcctggtgggaagaccccagtgaggcaggcgccc
ctggggccctccttgcgatccccaccctgttccccgcggcccaccagcatccgcatccgc
aagcacacttttggacagaactacatctccagccggccaccggtcctgggcgcagaggag
gctgaggccccagacccggctgacgaggaggtcagccacatcaccagctctgcccacagc
ccctcggcctcacctgctgcctgtggggtggtgggcggtgagccagacctgcacaggctc
tacagtgtcaatgcccagggcttcctggaccagccaggctgggcggacgagcagaggcgg
ccctccgtggagcagggctgtggggacagccgcccagaggccggggaggtgaagacccgg
gccctggaggccgagctggccctgggggcacgcaggaagaagaagatgagccccccctgc
atctccatagagccccccgcggaggacgagggtgcggcccgggcccctgcagcggagggc
ggtagcaccaccctgcggcggagaaccccatcctgcgaggctgtgccccacagggacccc
ctggagcccgcagacagtgcagggttggacactgccgccaagggggaacggcgggtccag
gtcccctgccgcacggagcacctgaccatcccgaactttgcctttgagccgctggatgtg
gggggccccaggggggacctgttcttggatggtggccatggtgtcgccccagaacccaga
ccttcctcctcaggcatcacggcacctcccgaaccccagcagacggagcctccagtggcc
tcgggagaccccccagaggaagggtgggggctgcacctcacagtccctgagagcccactg
aagaaggggtccaccccagtcctgggtgacagtgtggacaagcccgtgtag
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integrated database retrieval system
