Orcinus orca (killer whale): 101279903
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Entry
101279903 CDS
T05247
Symbol
COLEC12
Name
(RefSeq) collectin-12
KO
K10062
collectin sub-family member 12
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101279903 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101279903 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oor04091
]
101279903 (COLEC12)
Membrane trafficking [BR:
oor04131
]
Endocytosis
Phagocytosis
Opsonins
101279903 (COLEC12)
Lectins [BR:
oor04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Scavenger receptor with a CTLD (SRCL)
101279903 (COLEC12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Filament
KxDL
UL45
SepF
Alpha-2-MRAP_C
Fez1
Motif
Other DBs
NCBI-GeneID:
101279903
NCBI-ProteinID:
XP_004273818
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All DBs
Position
15:complement(52109268..52296667)
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AA seq
742 aa
AA seq
DB search
MKDDFAEEEEVHSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYK
VVEKMDSVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQ
QLREITEKTSKNRDTLEKLQVSGDALVDQQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQSQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSLDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFAGQMDNI
TTASQANEQNLKDLQDVHRDAENRTAVKFSQLEERFQLFETDIVNIISNISYTAHYLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGQQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPIGPVGPPGERGGKGSKGLQGPKGSRGSPGKPGPQGPSGDPGPTGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAAVPLALQSEPTA
APEANGCPPHWKNFTDKCYYFSVEKEIFEDAKLSCEDKSSHLIFINTREEQQWIKKQMVG
RENYWIGLTDSEQENEWKWLDGTSLEYKNWKAGQPDNWSHGHGPGEDCAGLIYAGQWNDF
QCEDINNFICEKDRETVPSPAL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacttcgcagaggaggaggaggtgcattccttcggttacaagcggtttggt
attcaggaaggaacacaatgtaccaaatgtaaaaataactgggcactgaagttttctatc
atattgttatacattttgtgtgccttgttaacaatcacagtagccattttgggatacaaa
gttgtagagaaaatggacagtgttacaggtggcatggagacatctcgccaaacctatgat
gacaagctcacagcagtggaaagcgacctgaaaaaattaggggaccaaactgggaagaaa
gctctcagcaccaactcagaactctccaccttcaggtcagacattctggatctgcgtcag
caacttcgtgagattacagaaaagactagcaagaacagagatacgctggagaagttacag
gtgagcggggatgcgctggtggaccagcagagtcaactgaaagaaactttggagaataac
tccttcctcatcaccactgtaaacaaaaccctccaggcatataacggctatgtcacaaat
ctgcagcaagacacgagtgtgcttcagggcaacctgcagagccagatgtattctcacaac
gtggtcatcatgaacctcaacaacctgaatctgacccaggtgcagcaaaggaacctcatc
acaaatctgcagcgctctttggatgacacaagccaggcaatccagcgaatcaagaatgac
ttccagaacctgcagcaggttttccttcaagccaagaaggacacggattggctgaaggag
aaagtgcagagcctgcagacgctggctgccaataactctgccttggccaaagccaacaat
gacaccctggaggacatgaacagccagctcagctcctttgcagggcagatggacaacatc
actacggcctcccaagccaatgagcagaacctgaaagatctgcaggatgtacacagggat
gcagagaacagaacggctgtcaagttcagccagctggaggagcgcttccagctctttgag
accgacattgtgaacatcattagcaacattagctatacggcccactacctacggacactg
accagcaacctgaatgaagtcaggaccacgtgcacggatacgctgaccaaacacacggat
gatctgacctccttgaataacacactggccaacatccgtttggattctgtttctctcagg
atgcaacaagatttgatgaggtcgaggttggacactgaagtggccaacttatcagtgatt
atggaagaaatgaagctggtggactccaagcatggtcagctcatcaagaattttacaata
ctacaaggtcctcctggccccaggggtccgaaaggtgacagaggacagcagggacccccg
ggtcccactggcaacaagggacagaaaggagagaagggggagcctggccctcccggcccg
gccggtgagaggggcccgatcgggccggtcggcccccctggagagcgtggtggcaaaggc
tccaaaggcctgcagggccccaaaggctcccgcgggtcccccgggaagcccggccctcag
ggccccagtggggacccaggccccactggcccaccaggcaaggacggactcccgggcccc
cagggcccccccggcttccagggactgcagggtaccgtgggggagcctggggtgcccggg
ccgaggggtctgccgggcttgcctggggtgccgggcatgccgggtcccaagggccccccc
ggtcccccgggcccatcaggggcggcggtgcccctggccctgcagagcgagccaactgca
gcacccgaggccaacggctgcccgcctcactggaagaacttcacagacaaatgctactat
ttttcggttgaaaaagaaatttttgaggatgcaaaactttcctgtgaagacaagtcttca
catctcattttcataaacacaagagaggaacagcaatggatcaaaaagcagatggtaggg
agagagaactactggatcggcctcacagactcagagcaggaaaacgaatggaagtggctg
gatgggacatctctagagtataaaaattggaaagctggacagccagataactggagtcat
ggccatgggcctggagaagactgtgctgggctgatttatgctgggcagtggaacgacttc
caatgtgaggacatcaataacttcatttgcgaaaaagacagggagacagtaccatcacct
gcattataa
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