Orcinus orca (killer whale): 101281773
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Entry
101281773 CDS
T05247
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8 isoform X2
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101281773 (PRDM8)
03036 Chromosome and associated proteins [BR:
oor03036
]
101281773 (PRDM8)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101281773 (PRDM8)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101281773 (PRDM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
DUF5810
zf-C2H2_2
zf-C2H2_6
zf-C2H2_9
Motif
Other DBs
NCBI-GeneID:
101281773
NCBI-ProteinID:
XP_004280211
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Position
4:complement(45037815..45057973)
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AA seq
688 aa
AA seq
DB search
MEDSGIQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRI
AKDEELLVWYGKELTELLLLCPSRSHSKMNGSSPYTCLECSQRFQFEFPYVAHLRFRCPK
RLHSVDVSPREEQGSGVGTKDHGGGGGGKDQQPPQPQEAPLGPSPKFCKAGPVHHYPAPS
PEGGNPPAAGGGGSSAKPSTDFHNLARELENSGGASSCSPVRSLSGCSDHQGAELSPDGN
AAGVGKGKRKFPEEAAEGGGGGGAALVGGRGRFAERPPPASKEDLVCTPQQYRASGSYFG
LEENSRLFAPPSPETGEAKRSAFVEVKKASRAAGVQEEAAADGGSMAAEEQDASGGGSST
PVAASPAGSEKLLAPRPGGALPGRLEGGSPARGSAFTSVQQLGGAGGNGAGGGAGAGTAG
GAGGGQGAASDERKSAFSQPARSFSQLSPLVLGQKLSALEPCHPGDGVGPTRLYPAASDP
LAVKLQGAADLNGGCGSLPSGGGGGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAGPL
QLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRR
REEKLKCPICNESFRERHHLSRHMTSHN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgggcatccagagaggcatctgggatggagatgccaaagctgtccaacaa
tgtctgacagatattttcaccagcgtttacaccacctgcgacatccctgagaacgctata
ttcggtccctgcgtcctgagccatacttctctgtacgacagcatagctttcatagctctc
aagtccaccgacaagagaacggtcccttatatcttccgggtagacacctcagcggcgaat
ggttcctcagaaggtctgatgtggctgcgtttggtccaatcagccagagataaagaagag
cagaaccttgaagcctacataaaaaacggacagctgttttaccgctctctccgcaggatt
gccaaagatgaggagttattagtttggtacgggaaagaactgactgagttactcttgctc
tgcccctctagatcccacagcaaaatgaatgggtcgtccccttacacatgcctggaatgc
agccaacgtttccagtttgagtttccctatgtggcgcatctgcgcttccgctgtcccaag
agacttcacagcgttgatgtgagcccccgagaggagcaaggcagcggcgtgggcaccaag
gatcacgggggcggcggcggcggcaaggaccagcagccgccgcagccgcaggaggcaccc
ttgggtcccagccccaagttctgcaaagccggcccggtccaccactacccggccccctcc
cccgagggcggtaacccgcctgcggcgggcggcggcggcagcagcgcgaagccgtccacg
gactttcacaacttggcgcgggagctggagaactccgggggagccagcagctgctcccca
gtgaggagcctcagcggctgcagcgaccaccagggggcggagctgagtcccgacggcaac
gccgcgggcgtgggcaaagggaagaggaaattcccggaggaggcggcggagggcggcggc
ggcggcggcgcggcgctggtggggggccggggccgcttcgccgagcggcccccgcccgcc
tccaaggaggacctggtgtgcacgccccaacagtaccgcgcctcgggcagctacttcggc
ctggaagagaacagccgcctgttcgcgccgcccagcccggagacaggcgaggcgaagcgc
agcgccttcgtggaggtgaagaaggcgtcccgagcggccggtgtgcaggaggaggcggcc
gccgacggcgggagcatggccgccgaggagcaggacgcgagcggcggcggctcctccacg
cccgtggccgcgtcgccggctggctccgagaagctgctggccccgcggcccgggggagcg
ctgcccggccggctggagggcggcagcccggcgcggggcagcgccttcacctcagtgcag
cagctgggcggtgcgggcggcaacggcgcagggggcggtgcaggcgctgggaccgcgggc
ggggcgggcggcggccagggcgcagcgtcggacgagcgcaaaagcgccttctcgcagccg
gcgcgctccttctctcagctgtccccgctggtgctgggccagaagctgagcgcgctcgag
ccctgccaccccggagacggtgtgggccccaccagactgtaccccgccgcctccgatcct
ctggccgtgaagctccaaggagctgcggacctgaacggaggttgcgggtctctgccgagc
ggcggtggcggtggcggcggcgggctgcctaaacagagccccttcctctacgccaccgcc
ttctggcccaagagctccgccgccgcggcggccgcggcggctgcggccgcggggcccctg
cagttgcagctgccctcggcgctcacgctgctgccgccctccttcacctctctgtgtctg
cccgcgcagaactggtgcgccaagtgcaatgcctccttccgcatgacctccgacctggtg
taccacatgaggtcgcatcacaaaaaggagtacgccatggagcccttggtgaaacgaaga
cgggaggagaaactcaagtgccccatttgcaatgagtccttcagggagcgccaccacctc
tccaggcacatgacttcgcataattga
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