Orcinus orca (killer whale): 101282886
Help
Entry
101282886 CDS
T05247
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04151
PI3K-Akt signaling pathway
oor04510
Focal adhesion
oor04512
ECM-receptor interaction
oor04820
Cytoskeleton in muscle cells
oor04974
Protein digestion and absorption
oor05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101282886 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101282886 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101282886 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101282886 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101282886 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101282886 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oor00535
]
101282886 (COL9A2)
Proteoglycans [BR:
oor00535
]
Extracellular matrix (ECM) proteoglycans
Others
101282886 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101282886
NCBI-ProteinID:
XP_004266442
LinkDB
All DBs
Position
1:180209428..180225247
Genome browser
AA seq
691 aa
AA seq
DB search
MAPEAARRSLLVLLQVLGLALAQIRGPPGERGPPGPPGPPGPPGVPGSDGIDGDQGPPGK
AGPPGPKGEPGKAGPDGPAGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFA
GPPGPAGPVGLPGEMGLTGPKGDPGPEGPAGPPGPPGKPGRPGTIQGLEGSADFLCPTNC
PAGVKGPPGLQGVKGHPGKRGHLGDSGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPG
MAGPKGETGPQGYKGMVGSIGAAGSPGEEGPQGPPGRAGEKGDVGSQGIRGPQGITGPKG
ATGPPGIDGKDGTPGTPGTKGSAGQAGRPGNPGHQGLVGVPGQPGTKGGPGDKGEPGRQG
FPGVSGSPGKEGEPGPRGEIGPPGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPG
PQGLPGIKGDKGFPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEAGYPG
PSGDAGAPGVQGYPGLPGPRGLAGNRGLPGQPGRQGVAGRDASDQHIEDVVLKMLQEQLA
EIAVSAKREALGATGMMGLPGPPGPPGYPGKQGPIGHPGPRGIPGIVGAVGQIGNIGPKG
KRGEKGDRGEGGRGHPGMPGPPGSPGLPGRSGQAINGKDGDRGVAGAPGEAGRPGLPGPM
GLPGFCEPAACLGASAYTSARLTEPGSIKGP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgaggccgcccgccgcagcctcctggttctcctgcaggtgctcgggctcgcc
ctggcgcagatcagaggtccaccaggagagcgggggcccccggggcccccgggaccaccg
gggccaccgggagtgcctggatccgacggaatcgacggtgaccaggggccccctgggaaa
gctggccctccgggacctaagggagagcctggcaaagcggggccagatgggccagccggc
aagcccgggattgacggtctaactggagccaagggggagcctggtcccatggggatccct
ggagtcaaggggcagcctgggctcccaggtccccccggcctgccgggccctggctttgcc
ggacctcctggaccagccggacctgttggcctccctggtgagatgggactcacgggcccc
aagggggatcctggaccagagggaccagcagggcccccagggccccctgggaaaccgggc
cgcccaggaaccattcagggtctggaaggcagcgcggacttcctgtgtccaaccaactgt
ccagcgggcgtgaaagggcccccggggctgcagggagtgaagggtcatcctggcaagcgc
gggcatctgggagattctggccgccaggggaagccgggtcccaagggagatgtgggtgcc
tctggagagcaaggcatccctggaccgccgggtccccagggcgtcaggggctacccgggc
atggcgggacccaaaggagagacgggtcctcaagggtacaaaggcatggtgggctccatc
ggcgccgccgggtcaccaggtgaggaaggtcctcaggggccaccaggccgagctggggag
aagggtgacgtgggcagccaaggtatccgaggaccccagggaataacaggcccgaaggga
gcaaccggcccaccaggcattgacggcaaggacgggaccccaggcacacctggcacgaag
ggcagtgcaggtcaggcggggcggccaggaaacccgggccaccagggcctagtgggtgtg
cccggccagcctgggacaaaaggaggccctggagacaagggtgagccaggccggcaaggc
ttcccaggagtctctggttcccctgggaaggagggagagccagggcctcgaggagaaatc
ggtcccccaggcatcatggggcagaagggtgaccacggtgagagggggccagtggggcag
ccaggccctcagggccgacagggccccaagggggaacagggtccccccggaattccaggg
ccccaaggcttgccaggcatcaagggagacaagggcttcccagggaagaccgggccccgc
ggcggagtgggcgacccgggggtggctggcctcccaggagagaaaggcgagaagggcgag
tctggcgagccagggcccaagggacagcaaggagtccgcggagaagccggctatccgggc
cccagcggggatgcaggcgccccgggggtgcagggctaccccgggctcccgggccctcga
ggactggctggaaaccgaggcttgcccggacagcccgggaggcagggcgtggcgggccga
gatgccagtgaccagcacattgaggatgtggtgctgaagatgctgcaagagcaactggca
gagatagctgtgagtgccaagcgggaggctctgggtgcgactgggatgatgggtctccca
ggaccccctgggcctcctgggtacccaggcaaacagggacccattgggcaccctggccct
cggggcattcctggcatcgtgggagccgtgggtcagattggcaacatcgggcccaaggga
aaacgcggcgagaagggtgacaggggagaaggtgggcgagggcatcccgggatgcctggg
cccccagggagcccaggactgcctggccgctctggccaggcgatcaacggcaaagatgga
gatcgaggggtcgcaggggccccaggagaggcaggccgacctggcctgccaggccccatg
gggctgccaggattctgtgagcctgcggcctgccttggagcctcagcctacacgtctgca
cgcctcacagagcctgggtccatcaaggggccctga
DBGET
integrated database retrieval system