Orcinus orca (killer whale): 101283292 Help Entry 101283292         CDS       T05247                                  Symbol COL6A6 Name (RefSeq) collagen alpha-6(VI) chain   KO K06238   collagen type VI alpha Organism oor  Orcinus orca (killer whale) Pathway oor04151   PI3K-Akt signaling pathway oor04510   Focal adhesion oor04512   ECM-receptor interaction oor04820   Cytoskeleton in muscle cells oor04974   Protein digestion and absorption oor05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:oor00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101283292 (COL6A6)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101283292 (COL6A6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101283292 (COL6A6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101283292 (COL6A6)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101283292 (COL6A6)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     101283292 (COL6A6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oor04147]     101283292 (COL6A6)    00536 Glycosaminoglycan binding proteins [BR:oor00536]     101283292 (COL6A6) Exosome [BR:oor04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    101283292 (COL6A6) Glycosaminoglycan binding proteins [BR:oor00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101283292 (COL6A6)  Hyaluronan   Extracellular matrix or blood plasma proteins    101283292 (COL6A6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA VWA_2 Collagen VWA_3 Integrin_beta Motif Other DBs NCBI-GeneID:  101283292 NCBI-ProteinID:  XP_004283481 LinkDB All DBs Position 5:13539386..13649765 Genome browser AA seq 2251 aa AA seqDB search MLLTSLLMIICSHVSVNQHSGPEYADVVFLVDSSDHMGIKSFPFVKTFINKMITSLPIEA HKYRVGLAQYSDGLHREFQLSTFKSRGPMLNHLKKNFRFLGGSLRIGNALQEVHTTYFSN GRDRRQFPPILVVLASAESEDAMEEASKALRNDGVRIISVGMQGASEETLKAMATGQFHY SLRTVRDLSTFSQNMTQILKDAAQYKEGAVNDILVEVCQGPSVADVVFLLDMSINGSWED FDYLKEFLEESVSALDIKENCMRVGLVAYSNETKVINPLSSGINKSGVLQDIQSLSPQAG KAYTGAALRKIRKEVFSVQHGSRKNQGVPQIAVLVTHSPSEDNVTKAALNLRRQGVTIFT MGIEGASDAQLEKIASHPAKQYVSKLKTFSDLAAHNQTFLKKLRNQITHTVSVVSERTET LKSGCVDTEEADIYLLIDGSGSTQATDFQEMKTFLSEVVGMFNIAPQKVQVGAVQYADCW DLEFEINKYTNKHDVGKAIENIRQLGGNTNTGAALNFTLGLLQKAKRQRENRVPSHLVVL TNSVSQDSILGPANRLREELIHVYAIGVKEANETQLREIAGEEKRVYYVHDFDALKDIRN QVVQEICAKEACKEMKADIMFLVDSSGSIGPENFIKMKTFMKNLVSKSQIGGDRVQIGVV QFSDINKEEFQLNRYMSQGEISDAIDRMAHIGETTLTGSALTFVSQYFSPAKGARPNVRK FLILITDGEAQDTVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENFDIL QHIEDDLVFGICSPHEECKRIEVLDVVFVIDSSGSIDHDEYNTMKDFMIGLVKKADVGKN HVRFGALKYADDPEVLFYLDNLGTKREVISVLQNDQPMGGNTYTAEALDFSDHMFTEARG SRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAGSSD KYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKMKKFLA SVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQIENIQQIFGSTHIGSALR QVGHYFQPDMGSRINTGTPQVLLVLTDGQSQDEVAQAAEELRHRGINIYSMGIGDVDDQQ LVQITGTANKKLTVHNFDELKKVKKRIVHNICTSGGESNCFVDIVVGFDISTQQNGQNLL EGQSWMETYLQDILRAISSLSGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSESILNS LKDVTVKRPSLLNANLLSSLWGAFQNKSAARGKVVLLFSDGLDDDVEKLEQKSDELRKEG LNALITVALDGATNSNDLADLLYIEFGKGFEYRTQLTLGMRDLGSRLSKHLVSVAERTCC CLFCKCIGGDGTVGDPGPAGKKGPPGFKGSKGYLGEEGIAGERGATGPMGEQGTKGCYGA KGPKGYRGLNGQEGEVGESGIDGLNGEQGENGLPGAKGEKGDEGAQGIPGERGIPGDHGA KGLCGDPGVPGFDNSIEGPNGLKGEHGRQGRRGWPGPPGTPGSRRKTAVHGQRGHTGPQG KTGIPGPDGLAGSLGLKGPQGPRGEAGMKGEKGGLGSKGPQGLPGPAGEAGSQGRVGSQG NKGEPGDVGEKGAVGLWGPRGLPGDDGNPGYGSVGSKGAKGQEGFPGEIGPKGEVGVPGG PGETGPKGTRGKMVSAGLPGEPGSPGELGPPGRKGVKGAKGLPAFSICELIQHVQDHSPG RHGAPRCPVHPTELVFALDQSRGVTEPEFARMKEMMTSLLGGLRVRENRCPAGARVAVLT YDSHARLLIRFSDAYRKDRLLREIEALPYEQSTSSRDIGKAMRFVSRNVFKRMLPGAHTR RIATFFSGGPSADAQTITTAGLEFSALDIIPVVIAFGQVPAIERSLVIDDTGRFQVTMVP HRIDSSPALEGLQRCTFCYDVCKPDASCDKARPPAVQSYMDAAFLLDGSRHVGSAEFEDI RGFLGALLDHFDITPEPETSVTGDRVALLSHAPPHFLPNTQRSPVRSEFNLTTYKSKRLM KRHVEESVQQLNGDAFIGHALQWTLNNVFLSTPNLRRNKVIFVISAGETSHLDRETLKKE SLRAKCQGYALFVFSLGPSWNDQELEDLASYPLDHHLVQLGRIHKPDHRYGVKFVKAFIS SVRRAINNYPPINIKAKCYRLSSADLQQPTRQLRSFLPGPHKATLKEDVLQKAKFFQRKK YLSRIARGRRDDTVQLILRETHPIPLKVGKE NT seq 6756 nt NT seq  +upstreamnt  +downstreamnt atgctgctcacttcgctccttatgataatttgttcccatgtttctgtcaaccaacattct ggccctgagtatgccgatgtggtgtttctggtggacagctctgaccacatgggaattaaa tccttcccgtttgtaaagacattcatcaacaaaatgatcaccagcctccccatagaggcc cacaagtaccgtgtgggcctggcccagtacagcgatgggctccacagagaattccagctc agcaccttcaagagcagagggcccatgttgaaccacctcaagaagaacttcaggttcctg ggtggctccctgaggattggtaacgctctccaggaggtacacacaacctacttctcaaac gggagggacaggagacagtttcccccgatcctggtggtcctggcttcagccgagtctgag gatgccatggaagaggcctccaaggcgctgcgcaacgacggggtgaggatcatctccgtg ggtatgcagggggcgtccgaggagaccctgaaggccatggccacaggccagttccactac agcctccggacggtccgagacctcagcacgttctcccaaaacatgacgcagattctcaag gatgcggctcagtacaaggaaggagcagtcaatgacattcttgtggaagtttgccaaggc ccttctgtggcagatgttgtgttcctgttggatatgtccatcaacggcagctgggaggac tttgactatcttaaagaattcctggaagaaagtgtatctgctctggacatcaaggaaaac tgcatgagggttggccttgtggcctatagcaatgagacgaaggtgattaacccactgagc agtggcataaacaagtcgggggttctccaggatatacagagcctctctccccaggccggg aaggcctacactggagctgccttgagaaagatcaggaaggaggttttcagcgtgcagcac ggcagtcggaagaatcagggggtgccacagatagctgtgctggtgacccatagcccgtct gaggacaacgtgaccaaggctgctctgaacctccggcgccagggggtgaccatcttcacc atgggcatagagggggccagcgacgcccagctggagaagatcgcatctcaccctgccaag cagtacgtctccaaactgaaaaccttctccgacctggctgcccacaaccagacgtttcta aagaaactgcggaaccagatcacacacacagtctctgtcgtttccgaaaggactgaaacc ctcaaatctggttgtgtggacactgaggaagcagacatctatctgctcatcgatggctct gggagcacccaggccacggacttccaggaaatgaagaccttcctgtcggaggttgtaggg atgttcaacatcgctccccagaaggtgcaagttggggctgtccagtatgctgactgctgg gacttggaatttgagatcaataaatacaccaacaagcatgatgtgggaaaggccatcgag aacatcaggcagctgggcgggaacacaaacacaggtgcagccttgaacttcaccctgggg ctgctgcagaaagcgaagaggcagcgggaaaacagagtgccaagccaccttgttgtcctg accaacagtgtgtcccaggacagcatcttggggcccgcaaacagactgagagaggagctc atccacgtctatgccattggggtcaaggaggccaacgagacacagctgcgagaaatcgca ggcgaggagaagcgggtgtactatgtgcatgactttgatgccttgaaagacataagaaac caggttgttcaagaaatctgtgccaaagaagcctgcaaagagatgaaggccgacatcatg tttctggtggacagttctggcagtataggacctgaaaacttcatcaaaatgaaaacattt atgaaaaacctggtgagcaaatctcagattgggggagatagggtgcaaatcggtgtagtc cagttcagtgacatcaataaggaggagtttcagctcaacagatatatgtcccagggggaa atttcagatgcaatagaccgaatggctcacattggagaaactaccttgaccggtagcgcc ctgaccttcgtgtctcagtacttcagccctgccaagggggcccgacccaacgtcaggaag ttcctcattctcatcacggacggtgaggctcaggacacagtcaaggacccagcagtggca cttcggcaagaaggcataattatctactccgtgggggtgtttggctccaatgtcacccag cttgaggagatcagtgggaggccggagatggttttttatgttgagaattttgacattctg caacacattgaagacgaccttgtttttggaatatgcagcccccatgaagaatgcaagcgc attgaagttttagatgtcgtgtttgtaattgacagctctggcagcattgaccatgatgag tataataccatgaaggacttcatgattggcttggtgaaaaaagctgatgtgggcaagaat cacgtccggtttggggctctgaagtatgcagatgacccagaggtgctgttttatctggat aaccttggcacaaaacgggaggtgatctcggtgctccaaaatgaccagcccatggggggc aacacttacaccgccgaggccctggacttctcagaccacatgttcactgaagcccggggc agccgcctgcacaagggggtcccccaggtcctcatcgtaatcaccgatggggaatcccat gatgccgataagctcaatgccacagccaaggccttacgggacaagggcatccttgtcctg gccgtggggatcgctggtgccaaccccgtggagctgctggccatggcaggatcaagtgac aagtacttctttgtggaaacttttggaggcctgaaggggatattttcagatgtgtccgcc agtgtgtgtaactcttcaaaagtagattgtgaaattgaaaaagtagacctcgtgttcctc atggatggttcgaatagcattcatccagatgacttcaagaagatgaagaaattcttggca tctgtcgttcaagacttcgatgtcagtgtcaacagagtgcgtataggagctgcccagttc agccacacctaccggccggagtttccactgggaactttcatcggcaaaaaggaaatctcc tttcagattgaaaacatccagcagatctttggatccacgcacattggctctgctctccgg caggtagggcactacttccagccggacatgggcagccggatcaacacaggtaccccgcag gtgctgctggtcctcacagatggccagtcccaagatgaagtggctcaggccgccgaagag ctgagacacagagggatcaacatttactccatgggcatcggggatgtggatgaccagcag ctcgttcagatcaccgggactgccaataaaaaactgacagttcacaactttgacgaactg aaaaaggtcaagaagaggatcgttcacaacatctgtacctcggggggtgagagcaattgc tttgtggacattgtggtgggatttgacatctcaactcagcagaatgggcagaatttgctt gaaggtcagtcttggatggaaacttaccttcaagacatcttacgtgccatcagttccctc agtggggtaagctgtgaggtgggcacggagactcaggttagtgtggcttttcaagtgacc aatgccatggaaaaatattcccccaagtttgagatctacagtgaaagcatactgaacagc ttgaaggatgtaacagttaaaagaccatctcttctcaacgcaaacctcttgagttctctg tggggtgcatttcagaataaatcagctgctcggggaaaggtggttctcttattttcagat ggattggatgatgatgttgaaaaacttgaacaaaaatctgatgaacttagaaaagaaggc ctgaatgccctcatcacagttgctctggatggagccaccaattccaatgacctggctgac cttctctacattgaatttgggaaaggatttgagtacaggacacagctcactcttgggatg agggatcttgggagccgactgtcaaagcacctggtcagtgttgcagaaaggacatgctgc tgtttattctgcaagtgcattggaggagatggcacagtgggagaccctggaccagcaggg aaaaagggacccccaggttttaaaggcagtaaaggctacctgggagaggaaggcattgct ggggaaagaggagccaccggaccaatgggagagcaaggtactaaaggatgctatggtgcc aaaggtcctaagggatacaggggactaaatggacaggagggagaagttggggaaagtgga attgatgggttaaatggagaacagggtgaaaatggtcttccaggagcaaaaggagaaaaa ggagatgaaggagcccagggaatcccaggagagagagggattcctggtgaccatggagca aagggcctgtgtggagaccctggagttcctggatttgacaatagcatagaaggacctaat ggcttgaaaggggaacacggaagacagggaagaagaggctggccaggcccccctggaacc ccaggctccagaagaaagacagcagttcatggccagaggggacatacaggcccacagggg aaaacaggcatcccaggcccagatggacttgcagggtcactgggacttaagggtcctcag ggcccaagaggagaggctggtatgaaaggagaaaaaggaggtctgggaagtaaaggtccc caggggcttccaggaccagcaggagaggcagggagtcaaggccgtgtgggaagccaagga aataaaggagaacctggcgatgtgggagaaaagggagccgttggcctttggggtcctcga ggcttgccgggtgatgatggtaacccaggttatggtagtgttggaagtaaaggagcaaag gggcaagaaggattccctggagaaattggacctaagggtgaggttggggtccctggtggt ccaggagaaactggacccaagggcactagaggcaagatggtgtctgctgggcttccagga gagccgggatcccctggggagctgggacctcctggacgcaagggtgtgaaaggggccaaa ggattgccggccttctccatatgtgagctcatccagcatgtgcaggaccacagtcctggc agacatggagccccgcggtgccctgtgcatcccacggagctggtgttcgcgctggaccag tcccggggcgtcacggagccagagttcgcacggatgaaggagatgatgacctccctgttg ggcggtctccgggtccgggagaaccgctgccctgcgggcgcgcgcgtggccgtgctcacc tacgactcccacgccaggctcctcatccgcttctccgacgcctacaggaaggacagactc ctcagagagatcgaggcccttccttacgagcagtccacgtccagcagggacattggcaag gccatgaggtttgtctccaggaatgtcttcaagcggatgctcccaggggctcacaccaga agaatcgccacgttcttcagtggcggcccatctgcggatgcccagaccatcacgacggcc ggcctggagttcagcgccctggacatcatcccggtggtgatcgccttcggccaggtgccc gccatcgagcgctcccttgtgattgacgacactggcagattccaagtcaccatggttcca cacaggattgactcttcaccagcactagagggactccagcggtgcactttctgctacgat gtctgcaagccggatgcttcttgtgacaaagccagaccaccagctgtgcaatcttacatg gacgctgctttccttctggatggctcccggcacgtgggaagtgcagaatttgaagacata agaggcttcctgggagcactgttagatcactttgacatcaccccagagcctgagacctcc gtcactggagaccgggtggccctattaagccatgctcccccccacttcctacccaacact cagaggagtcccgttagaagtgaattcaaccttaccacctacaagagtaaacgccttatg aagaggcacgtggaagaatcagttcagcagctcaatggagatgcttttattggtcatgcc ttacagtggactctgaacaatgtcttcttgagtacacccaatctgagaagaaataaagtc atttttgtgatatctgctggggaaaccagtcacttggatagggaaaccttaaagaaagaa tccttgagagccaagtgtcaaggttatgccttatttgtgttttcccttggcccttcttgg aacgaccaggaactggaagatctagccagctacccgttggatcaccacttggtccagctt ggccgcattcataagcctgaccacagatatggtgtgaagtttgtgaaggcctttataagc tcagtcaggcgtgcaatcaacaactatccaccaataaacatcaaagcaaagtgctacaga ctcagctctgcagatctgcagcagcccacgcgccagttgcgaagcttccttcctggacca cataaagctaccctcaaagaagatgtattacagaaggcaaaattctttcaacgtaaaaaa tatctgtcaagaatagcaagaggccgcagagatgatactgttcaattaattttacgagaa acacatcccatacctttaaaagtgggaaaggagtga

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