Orcinus orca (killer whale): 101284229
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Entry
101284229 CDS
T05247
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X4
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101284229 (SHANK1)
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GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
PDZ_6
PDZ
Ank_5
SH3_1
SH3_9
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
101284229
NCBI-ProteinID:
XP_033273070
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All DBs
Position
20:complement(52848592..52896018)
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AA seq
1915 aa
AA seq
DB search
MTRIQEALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLYNRAQLGIADENGWQEI
HQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKETCARILLYRGADKDVKNN
SGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARRRGPPGVGLTVPPALLRAN
SDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQPQPSAPSTKLSSGTLRSASSPRGARAR
SPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRS
FMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRIGWFPSDCLEEVANRSQEA
KQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIKEKTVLLQKKDSEGFGFVL
RGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV
VNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPPQAKRLPPPTISLRSKSMTSELEELVS
PWKKKSEYEQQVAPVPSVEKKRTVYQMALNKLDEILAAAQQTISASESPGPGGLASLGKH
RPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDERPYLAPPAMKFSR
SLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGAPFNPGSGVPHPASSPSSF
DGPCPPESRVGSREKSLYHGGALPPVHHPPPPHQPHAPLPQPHHHHAHPPHPPEMETGGS
PDDPPPRLALGPQPSLRGWRGGGPSATPGALSPSHHGSGGGVSGSSQAPALRYFQLPPRA
ASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPTPSPTSPASPQPPPAAAAPSEKN
SIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPETAGGGGGGGGGGGGGGSSAPSPAPA
MSPVPPPPSPVPAPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDTG
DEEGGESSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGGGYGGYGAGSRAYG
SSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESAEGGGAPQPPPRPP
SPRYEAPPPTPHHHSPHAHHEPVLRLWGAPPPDPARRELGYRAGLGSQEKSLPASPPAAR
RSLLHRLPPTAPGVGPLLLQLGSETPVPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPR
AGGAGGRGPPSEDGPGIPPPSPRRSVPPSPTSPRGSDENGLPLLVLPPPAPSVDVEDGEF
LFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTAASPAPPAPPPAVAAAPPTLDSTA
SSLTSYDSEVATLTQAGPAAAGDAPPPGPAAPAAPPPPAPQPGPDPPAGTDSGIEEVDSR
SSSDHPLETISSASTLSSLSAEGGAGGGVASVASGPELLDTYVAYLDGQAFGGSGPPGPP
YPPQLMTPSKLRGRALGASGGLRPGPGGGLRDPVTPTSPTVSVTGAGTDGLLALSGCSGL
STAGVAGGPGAVEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATV
KASIISELSSKLQQFGGSSAAGGALPWARGGGGGSGDGHHGGASYVPERTSSLQRQRLSE
DSQPSLLSKPVSSLFQNWSKAPLPPLPTGGGGSASAAAAPGATSPSATSSSTSARHLQGV
EFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPAGPLYPGLFDIRGSPTGGAGGS
ADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFSAKPLGFWTKFDVADW
LEWLGLSEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgactcggattcaggaggcgctcctggatcttgggggttcccccaactacaaggaccgc
cgggggctgactcctctgttccatacggctatggtggggggcgacccccgctgctgtgag
ctgctcctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagatc
caccaggcctgccagaggggccattctcagcacctggaacacctgctcttctatggggct
gagcctggagcccagaacgcctcggggaacacggccctgcacatctgcgccctctacaat
aaggagacgtgtgctaggatactcctctaccgaggagctgacaaggatgtgaaaaataac
agcggccagacccccttccaggtggcagtgattgctgggaactttgaacttggggagctg
atccgaaaccatcgagaacaggacgtggtgcccttccaggagtcccccaagtacgcagcc
cggcgacggggaccccccggcgtggggctgacggtgccccccgcgctgctgcgggccaac
agcgataccagcatggccctgcctgactggatggtgttcgccgccccggggacctcatcc
gccggggcccccggccctacctcagggccccagggccagccgcagccctcggcccccagc
accaagctcagcagtgggaccctccgcagtgccagcagcccccggggcgcccgggcccgc
tccccatcccgagggaggcaccccgaggaggccaagaggcagccgcgtggacggcccagc
tccagcgggacaccccgggaagggccagctgggggcaccgggggctccgggggccccggg
ggctccctgggcagccgcgggagacgccggaagctctactcagcggtccccggacgttcc
ttcatggctgtgaagtcctaccaggcccaagccgagggggagatctccctaagcaagggc
gagaagatcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggt
cgcatcggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaggca
aagcaagaaagccgaagtgacaaggcaaagagactattccggcattataccgtgggctcc
tacgacagctttgatgccccaagcttaatggatgggattggcccagggagtgattacatc
atcaaggagaagacagttctgctgcagaagaaggacagtgaggggtttgggttcgtgctc
cggggggccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcg
ctgcagtatctggagtcggtggacgagggtggcgtggcatggcgagctggactgcgaatg
ggagacttcctcattgaggtgaacgggcagaatgtggtgaaggtcggccaccggcaggtg
gtgaacatgatccgccaggggggcaacacgctgatggtcaaggtggtgatggtcaccagg
cacccggacatggatgaggctgtgcataagaaagcaccgccgcaggctaagcggctcccg
cctccaaccatctccctgcggtccaagtctatgacctcagagctggaggagctggtctcg
ccctggaagaagaagagtgagtacgagcagcaagttgcgccggtgcccagcgtggagaaa
aagcggaccgtgtaccagatggctctcaacaagctggatgaaattttggcggccgctcag
cagaccatcagtgcaagtgagagtcctgggcctggtggcctcgcgtccctgggcaaacac
cgaccgaaaggcttctttgccactgagtcgagctttgatccccaccaccgctcccagcca
agttatgaacgtccttcctacctgcctccaggacctgggcttatgctccggcaaaagtct
attggggctgcagaagatgagagaccctacctagcacccccagccatgaagttcagccgc
agcctgtctgtgcctggttcggaggacatcccgccgccgcccaccacgtccccaccagag
cccccctacagcacacctccagccccctcttcctccggccgcctcactccctctccccgg
ggagcgcccttcaaccccggctcaggtgtcccccaccccgcctcgtcaccgtcgtccttc
gatgggccctgccctcctgagagccgtgtagggagccgtgagaagagcttgtaccacggc
ggggccctgccccctgtgcaccacccgccccccccacaccagccgcacgctccgctcccc
cagccacaccaccaccacgcccacccgccgcatcccccggagatggagacaggcggctcc
cccgatgaccccccaccgcgactggctctggggccccagcccagcctgcgaggctggcgg
ggcggcgggcccagcgcgaccccgggggccctgtccccgtcgcaccacggcagcgggggc
ggggttagcggctcctcccaggccccggccctgcgctacttccagctgcctccccgggcg
gccagcgcggccatgtacgtgccggcccgttcgggccgcgggcgcaagggcccgctcgtc
aagcagaccaaagtcgaaggcgagccccagaagggcggcggcctcccgcccacgccctcg
cccacgtctccggcgtccccgcagccgccgccggccgcggccgccccgtcggaaaagaac
tccatccccatccccaccatcatcatcaaggctccatccaccagtagcagcggccgcagc
agccagggcagcagcaccgaggcggagcccccgacccagcccgagaccgcgggcggcggc
ggagggggcggcggcggcggcggcggcggcggctcctccgcgccgagccccgccccggcc
atgtcgccagtgccgccgcccccctcgcccgtgcccgctcccgcctcgcccagcggcccg
gccaccctcgacttcaccagccagtttggagcggccctggtcggggcggctcggagagaa
gggggctggcagaacgaagcccgccggcggtctacgctcttcctttccaccgacacgggg
gacgaagagggcggcgagagctcgctgggcccgggggcgcccccgggcccccggctgcgc
cactccaaatccatcgatgaaggcatgttttcggccgagccctacctccggctggagtcc
gcaggcgccgggagcggcggcggctacgggggctacggagccggcagccgagcctatggg
agcagcggaggcagcagcgccttcaccagcttcctgccgccgcgccccctggtccacccg
ctgacaggcaaggccctggacccagcctccccgctcgggctggccctggccgcccgagag
cgggcgctgaaggagtccgcggagggcggtggggccccccagccccctccgaggcccccg
tcgccccgctacgaggctccgccgcccacgccgcaccaccactcgccccacgcccaccac
gagccggtgctgcgtctctggggagcccccccgccggacccggcgcgccgggagctgggc
taccgggccgggctgggcagccaggagaagtcccttccggccagcccgccagctgcccga
cgctccctgctgcaccgcctgccgcccaccgcccccggggtcgggcccctcctgctgcag
ctggggtccgagacccccgtcccgcaccccggggtgagcaaaccctggaggtccgcagcc
ccggaggagcccgagcggctgcccctccacgtgcggttcctcgagaactgccagccccgg
gccggtggggcggggggcagggggcccccctcggaggacgggccggggatcccgccgccc
agccctcgccggtccgtgcccccctcgccgacctccccgcggggcagtgacgagaatggg
ctccccctgctggtcctgccgccccccgccccctcggtggacgtggaagacggcgaattt
ctctttgtggaaccgctgcccccgcccctggagttctccaacagctttgagaagcccgaa
tcgcccctcacgccggggccgccccacccgctgccggacccacccaccgcggccagccca
gcgccccctgcgccgccccctgccgtggccgccgcccctcccacgctggactccaccgca
tccagcctgacttcctatgacagcgaggtggccacgctgacccaggcgggccccgcagct
gctggggacgcgcctccgccgggcccagcagccccagccgccccgcctccccctgcccca
cagcctggcccagatcctccagctggcacagattctggtatcgaggaggtggacagtcgg
agcagcagtgaccacccgctggagaccatcagcagcgcgtccacgctgagcagcctgtct
gccgaaggcggggctggcggcggggtggccagtgtggccagtgggccggagcttctggac
acgtatgtggcctacctggacggccaggccttcgggggcagcggtcctcctggcccacca
tacccgccgcagctcatgactccctctaagctccggggccgggcgcttggggccagtgga
ggcctgcggcctggccccggtgggggactccgagaccctgtcactcccaccagccccacc
gtctcagtgacgggggctggaaccgatgggctgctggccctgagtggttgctcaggactt
tcgacggcaggtgtggccggcggtccaggggctgtagagccagaaggcccaccggtgccc
ttgccatccgcctcctccctgcctcggaagctgctgccctgggaggagggcccgggtcca
ccaccaccacccctgcctgggcccttagcccagcctcaggcctcagccttggccacagta
aaagccagcatcatcagtgaactcagctccaagcttcagcagtttgggggctcctcggca
gctggcggcgctctgccctgggcccggggaggcggcgggggaagcggggacggccaccac
gggggagccagctacgtcccagagaggacttcctccctgcagcggcagagactctcggaa
gactcccagccctcgcttctctccaaacctgtcagcagcctgtttcagaactggtccaaa
gcgcctctgccgcccctccccacaggaggcgggggctccgcttcggccgctgcggccccg
ggggccacctcgccgtcggccacctcctcctccacgtccgcccgccacctccagggcgtg
gagttcgagatgcggccacctttgctccgccgggccccgagcccgtccctgctgcccgcc
tcggagcacaaggtcagccccgcgccccggccctcctccctacccatcctgcctgctgga
ccgctctacccgggcctctttgacatccgcggctcccccaccggaggggcaggaggctcg
gctgaccccttcgcccctgtctttgtgccaccgcaccccgggatgtccgggggtctcggc
ggggccttgtcaggggcctcacgctccctctcaccgacccgcctgctctccctgcccccg
gacaagccgttcagcgctaaacctctggggttctggaccaagttcgacgtggccgattgg
ctcgagtggctgggcttgtctgagcaccgagcccggttcctggaccacgagatcgatggc
tcccacctgcccgccttgaccaaggaggactacgtcgatctgggggtgaccagggtgggc
caccgcatgaacatcgaccgggctctcaaatttttcctggagaggtga
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