Orcinus orca (killer whale): 101284713
Help
Entry
101284713 CDS
T05247
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03022
Basal transcription factors
oor05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101284713 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101284713 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101284713 (TAF4)
03036 Chromosome and associated proteins [BR:
oor03036
]
101284713 (TAF4)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101284713 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
101284713 (TAF4)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101284713 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
101284713
NCBI-ProteinID:
XP_049556007
LinkDB
All DBs
Position
16:2466843..2538984
Genome browser
AA seq
1057 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARAAAAGALGN
HVGAGAVPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPHCAASLVPAGPAAKLSALEA
GASAAAGAGAGAGAAAGACAPGAAAAPEPAAKPAARNGPPGGPGAAQTLNGSAALGNSLR
AAAAPAVSLLHNGPAPAPPPPKPAAATVIQTPPFLGAPPAPAPRAPSPPAPATPAAPPAP
AAAAPPPAPPAAASLARPPGPPAGPPVAAQNGGSAAPAPAPAPAPAPAPAPVSAPAPAAN
SQPGPAAAPAQVAKADSPKTALQPAPPPPQTLAASCPAGAGAGMILGPTMQGALPAAAGL
PPPAPGTPTGLPKGSTSAVTQSLPRTPSATTGGIRATLTPTVLAPRLPQPPQNPTNIQNF
QLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQTAMAPRPATPTSAPPVQISTVQ
APGTPIIARQVTPTTIIKQVSQAQTTVQPSTALQRSPGVQPQLVLGGAAQTPSLGTATAV
QTGTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL
LDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPASQ
ATTALTAVVLSSSVQRTAGKTAATVTSALQPPVISLAQPTPVGVGKQGQPTPLVIQPPPK
PGALIRPPQVTLTQTPMVALRQPHNRIVLTTPQQIQLNQLQPVPVVKPAVLPGTKALSTV
SAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCK
DETFLLPAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSY
KDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPAPGSGVEGSGPGSAVPGSSGVGTPR
QFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcgcgggccgcggccgccggcgcgctcgggaac
catgtcggagccggagccgtgccggccgagggcgcgcccgcagcggcgccggagccgccc
cccgcaggtagagcgcggcgcggcctgagcgcgggcggccgccggccgggcccgcgtcct
cactgcgctgcttcgcttgtccccgcagggcccgccgcgaagctgagcgcgctcgaggcc
ggcgcgagcgccgcggccggcgccggggccggggcgggcgccgcggccggggcctgtgcg
ccgggggcagcggccgcgcccgagcccgccgccaagcccgccgcccgcaacggcccgccc
ggcggccccggcgccgcgcaaactttgaatgggagcgccgcgttggggaactcgctccgc
gccgccgccgcacctgctgtcagcctgctccacaacgggcccgcgcccgcgccgccgccg
cccaagcccgccgccgccactgtcatccagacgccgcccttcctcggcgccccccccgcg
cccgcgccccgcgccccctcgccccccgcgcccgccacgcccgccgcgccccccgcgccc
gccgccgctgccccgccgccggcgccgcccgccgccgccagcctggcccggccgcccggt
cccccggccggacccccggtggccgcgcagaacgggggcagcgccgcgcccgcccccgcg
cccgcccccgcgcccgccccggccccagcgcccgtttctgccccggcgcccgccgccaac
agtcagccagggcccgccgccgcgcccgcgcaggtggccaaggccgactcgcccaagact
gcgctgcagccggcgcccccgccgccgcagaccctggcggccagctgcccggccggcgcg
ggggccggcatgatcctcgggccaactatgcaaggggctctgcccgccgccgccggcctc
ccaccgccggcccccggtacccccaccgggctgcccaagggctcgaccagcgcggtgacc
cagagcctgcccaggacgccctcggccaccaccggcgggatccgggccacgctgacgccc
acggtcctcgccccacgcctgccgcagccgccgcagaacccgaccaacatccagaacttc
cagctgcccccaggtatggtcctcgtgcggagcgagaacgggcagctgttaatgattcct
cagcaggccctggcccagatgcaggcccaggcccacgcccaggcccagcctcagaccgcc
atggcgccccgcccggccacgcccacaagtgcccctcccgtgcagatctccaccgtgcag
gcacctgggacccccattattgcacggcaggtgaccccaacgaccataatcaagcaagtg
tctcaggcccagacgacggtacagcccagcaccgcgctgcagcgctctcccggggttcag
cctcagcttgttctgggtggcgctgcccagacaccctcacttgggacggcgacagctgtt
cagacggggacacctcagcgaacggtcccgggggccaccaccacctccacagccgccacg
gaaactatggagaatgtgaagaaatgtaaaaattttttatctacgctaataaaactggct
tcatctggtaaacagtctacagagacagccgctaacgtgaaagaactggtacagaatctg
ctggacggaaaaattgaagcagaagatttcactagtaggttataccgagaacttaattct
tcacctcaaccctaccttgtgcctttcctgaagaggagcttgcccgccttgagacagctg
acccccgactccgcggccttcatccagcagagtcagcagcagccgccaccggcctcgcag
gccaccaccgcactcacggctgtggtgctcagcagctcggtgcagcgcacggctgggaag
acggcggccaccgtgaccagtgccctccagccccctgtcatcagcctcgcacagcccacg
ccggtgggcgtcggcaagcaggggcagcccacgccgctggtgatccagccgccgcccaag
cctggagcgctgatccggccgccgcaggtgacgctgacacagacgcccatggtggcgctc
cggcagccccacaaccgcatcgtgctcaccacgccccagcagatccagctgaaccagctg
cagccagtccctgtggtgaaacctgccgtgttacctggaaccaaagctctttctactgtc
tcagcacaagcagctgctgcacagaaaaacaagctcaaggagcccgggggaggctcgttt
agggacgacgatgacatcaatgacgtagcgtcgatggccggcgtgaacctgtcggaagaa
agtgcgagaatattggctacgaactctgagttagtgggcaccctgacgcggtcctgcaaa
gacgagaccttcctcctcccggcgcctctgcaaagaagaatattggaaataggtaagaaa
cacggcataacagagttacacccagacgtggtgagttacgtgtcacacgccacgcaacag
aggctgcagaaccttgtagaaaagatatcagaaacggctcagcaaaagaacttctcttat
aaggatgatgacagatacgagcaggcaagtgatgtccgggctcagctcaaattttttgaa
cagcttgatcaaattgagaaacagagaaaggacgaacaggagagagagatcttgatgcgg
gcagcaaagtctcggtccagacaagaagatccagagcagttaaggttgaaacagaaggca
aaggagatgcagcaacaagaactggcacagatgaggcagcgagatgccaacctcacagca
ctggctgccatcgggcccaggaaaaagaggaaagtggactctccggcaccgggatcggga
gtagagggctcgggcccaggctcagcggtcccaggcagttccggcgtcggaacccccaga
cagttcacgcgacaaaggatcacgcgggtcaacctcagggacctcatattttgtttagaa
aatgaacgtgagacaagccattcactgttgctctacaaagcattccttaagtag
DBGET
integrated database retrieval system
