Orcinus orca (killer whale): 101285683
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Entry
101285683 CDS
T05247
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X11
KO
K23625
ataxin 2/2L
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05014
Amyotrophic lateral sclerosis
oor05017
Spinocerebellar ataxia
oor05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101285683 (ATXN2L)
05017 Spinocerebellar ataxia
101285683 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
101285683 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101285683 (ATXN2L)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101285683 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
Motif
Other DBs
NCBI-GeneID:
101285683
NCBI-ProteinID:
XP_004268671
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Position
16:complement(71410515..71422148)
Genome browser
AA seq
1098 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLG
PAAAAGSGLRRGAESILAPPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGIKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSETRGINGGPSRMSPKAQRPLRGAK
TLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPV
TSSVGDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGLQNEQKRF
QLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLASEPMGSPVSSKT
ESISDKEDKPPLPPAGGAEGPDQPPPPCPSQTSSPPVGLIKGDDKDEGPVAEQVKKSTLN
PNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMG
PAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVA
ATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTP
QYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQ
APHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGFTN
MAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPS
PYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPA
APLPTASPALSDPDCLLT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccgggggcaccagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccccagggcctcccgccgctgcttccccctgcttgggg
cctgcagccgctgccgggagcgggctccgccggggagctgagagcatcttggcgccgccg
ccgccgccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgccagg
ggacaaagcacaggaaagggacccccacagtcaccggtgtttgagggtgtctacaacaat
tccaggatgctgcatttccttacagctgttgtgggctccacttgtgatgtaaaggtaaag
aatggtaccacctatgaaggtatcttcaagaccctgagctcaaagtttgaactggcagta
gacgctgtgcaccggaaagcatcggagccagcaggtggtcctcgtcgggaagacattgtg
gacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgttgacttc
aattatgctactaaagacaagttcactgattcagccattgccatgaactcgaaggtgaat
ggggagcacaaggagaaggtgcttcagcgctgggaggggggcgacagcaacagcgatgac
tacgacctggagtctgacatgtccaatggatgggaccccaatgaaatgttcaagttcaat
gaggagaattacggcataaagaccacctatgacagcagtctctcttcttacacggtgccc
ttagagaaggacaactcggaagaatttcgtcagcgggagctgcgtgcagcccagttggct
cgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaatgatgacggg
cgcaccgaggaggagaagcacagtgcagttcagcgacagggttcagggcgagagagcccc
agcttggcatctagggagggaaagtatatccctctaccccaacgagttcgggaaggtccc
cggggaggagttcgatgcagtagttctcggggtggccggcctggccttagctctttgcca
cctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgagacacgcggt
atcaatggaggcccttcccgcatgtcccctaaggcacagcggcctctgagaggtgccaag
actctgtcttcccccagcagcaggccttctggagaagcttctgttccacctcctcctgca
gtaggccggatgtaccccccacgctctcccaagtcagctgcccctgccccaatctcagct
tcctgtcctgagcctcccatcggctcagcagtaccgacctcttcagcttccatccccgtg
acatcatcagttggggatcctggagtaggctccatttccccagcttctccaaagatctca
ctggcacccacagatgtaaaagaactcccagccaaggaacctgggagaacgctggagtcc
caggagctgtcccggatagcagggaaagtccctggccttcagaacgagcagaaacgcttt
caactggaagaactgagaaaatttggggcccagtttaagcttcagcccagtagctcccct
gagaccagcctggatccttttcctccccggatcctaaaggaggaggccaaagggaaggag
aaggaggttgatggtcttttggcttcagagcccatggggtcccctgtttcctccaagaca
gaatccatatcggataaggaggacaaaccacccctgccaccagcaggaggcgccgaaggg
ccggatcagcccccaccgccttgcccaagccaaaccagtagccccccagtgggcctcatc
aagggagatgacaaggatgagggccctgttgctgaacaagtgaagaagtcaacattgaac
cctaatgccaaggagttcaatcccactaagccgctgctgtctgtgaataaatccaccagt
actccaacttctcctgggccccggactcattcaactccctccatcccggtgctgacagca
ggccagagtgggctatatagcccccagtacatttcctacatacctcagatccacatggga
ccagctgttcaggcacctcagatgtatccatatcctgtgtccaactcagtgcctggacag
cagggcaagtaccggggagcaaaaggctccctgcccccccagcgctcggaccaacaccag
ccagcctcagcccctccgatgatgcaggccgccgccgctgctggcccccctctggtggct
gccacaccttattcttcctacatcccctacaatccacagcagttcccaggccagcccgcc
atgatgcagcccatggcccactacccctcgcagccggtgtttgcccccatgcttcaaagc
aacccacgcatgctgacgtcggggagccatccccaggccattgtgtcgtcctccacccct
cagtacccttctgcagagcagcccaccccccaagccctttatgccactgttcaccagtcc
tatccacaccatgccacgcagctccatgcccaccagccgcagccggccaccacgcctact
gggagccagccgcagtcccagcatgcagcccccagtcccgtccagcaccaggcggggcag
gccccacacctgggcagtggacagccacagcagaacctgtaccacccaggggccctgaca
ggcacgccgccttctctgccgccgggaccttctgcgcagtcccctcagagcagcttcccc
cagccagccgctgtgtatgctatccatgcccaccagcagctgccccacggcttcaccaac
atggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccccctcac
cctggggctccccacccgccccaggtgatgctgctgcacccaccccagagccatgggggc
cccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccacaccctca
ccctatccctacatcggacacccccaaggtgagcagcctggccaggcgcctggatttcca
ggaggagccgatgacaggattctatgtagggtgggcagaagccacagtcgccgccgccag
gggcttgctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgatccagca
gcccccctccccactgcctccccagctctcagtgaccccgactgtctcctgacttag
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