Orcinus orca (killer whale): 101286961 Help Entry 101286961         CDS       T05247                                  Symbol COL27A1 Name (RefSeq) collagen alpha-1(XXVII) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism oor  Orcinus orca (killer whale) Pathway oor04820   Cytoskeleton in muscle cells oor04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:oor00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101286961 (COL27A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101286961 (COL27A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oor00536]     101286961 (COL27A1) Glycosaminoglycan binding proteins [BR:oor00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101286961 (COL27A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Motif Other DBs NCBI-GeneID:  101286961 NCBI-ProteinID:  XP_004269352 LinkDB All DBs Position 6:101076033..101219862 Genome browser AA seq 1846 aa AA seqDB search MGAGSARGARGTAAAAAARGRGFLFTWILVSLACHLASTQGAPEDVDVLQKLGLSWTKAA GGRSPPPPGVIPFQSGFIFTQRARLQAPTAAVVPAALGTELALVLSLCSHRVNHAFLFAV RSRKHKLQLGLQFLPGKTVVHLGPRRSVAFDLDVHDGHWHHLALELRGRTVTLVTACGQH RVPVPLPFHRDPALDPEGVFLFGKMSPHAVQFEGALCQFSIYPVTQVAHNYCTHLRKQCG QADTYRPQLGPFLPRGSGTPLTFQTDLALLGLENLTTATPARASQPAGRGPRVTVMPAVP AKPLRTNSTGPHQPFTGGGPARTLRPPARLSASEGLSPVPPASPASSTRPVQPLQKSTAT KIPKSHPTKPSAPSPWMAPVKSPRPTRKAAPPSFTKAAPPTKKPVLPTSHPAPDRVSCPT VKPIQRNPVTPRQPAPSTRPLPPAASSSKRSFPPVVQAEAKTSSHVSELAPARTNTHTPP RPAGLPPSPAPSPRASRTARPQATAMPPTLAPGSAPTGSKKPTGPEAAKKVRSKSSPWKA VPLRPGKAARDVPVNHPTTGPSPRQLRPSQQTTPAPVLAPAPFLSSSPQPMSTGSSFFHL VGPTPFLLLMGPPGPKGDCGLPGPPGLPGLPGPPGARGPRGPPGPYGNPGLPGPPGAKGQ KGDPGLSPGKAHDGAKGDEGLPGLSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGA KGYPGRQGLPGPVGNPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGD FGERGPPGLDGNPGELGLPGPLGVPGLIGDMGALGPIGYPGPKGMKGLMGDVGEPGLKGD KGEQGVPGVSGDTGFQGDKGSQGLPGFPGARGKPGPVGKVGDKGSVGFPGPPGPEGFPGD IGPPGDNGQEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGP DGLKGEPGNPGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGT PGGVGTPGEPGPMGPPGSRGPLGMRGAKGRRGPRGPDGPAGEQGSKGLKGPTGLQGRPGQ PGQQGVAGERGHLGTRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPVGPPGEMGPKGLPGA VGEPGLPGEAGMKGDLGPLGTPGEPGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGE RGEKGQEGLKGEDGPPGPPGITGVRGPEGKPGKQGEKGRMGAKGAKGYQGQLGEMGVPGD PGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGE DGTAEGHPGPPGDRGPVGDRGDRGEPGDSGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPG PKGSKGDEGPKGKQGKAGGPGRRGIQGLQGLPGPRGVVGRQGPEGVAGPDGLPGRDGQAG QQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLLGQLGPPGKRGTEGGTG LPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG PLGFLGPSGHQGPKGDKGRRGDLGLQGPRGPPGPRGQPGPPGPPGSPIHFQQDDLGAAFQ TWMDASGALRAEGYSHPDRLVLDQGGEIFKTLHYLSSLIQSIKTPLGTKENPARVCRDLM DCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFLHL LSSEVTQQITIHCLNMTVWQEGTRQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCKVQ DGRWHQTLFTFRTQDPQQLPIVSVDNLPPASSGKQYRLEVGPACFL NT seq 5541 nt NT seq  +upstreamnt  +downstreamnt atgggagcgggatcggcgcggggggcccgaggcacagcggcggcggcggcggcgcgcggg agggggtttctcttcacctggatcttagtctcccttgcctgtcacctggcttccacccaa ggagctcctgaagatgtggacgtcctccaaaagctgggcctcagctggacgaaggcagcg ggcggccggagccccccgcccccaggggtcattccgttccagtcaggattcatctttacg cagcgggcccggctccaggcccccacggctgccgtcgtccctgccgccctgggcacagag ttggcgctggtgctgagcctctgttcccaccgggtgaaccatgccttcctcttcgccgtc cgcagccggaagcacaagctgcagctgggcctgcagttcctccccggcaagacagtcgtc cacctggggccccggcgctccgtggccttcgacctcgacgtgcacgacgggcactggcat cacctggccctggagctccgcggccgcaccgtcaccctggtgacggcctgcgggcagcac cgggtgcctgtcccgctgcctttccacagggacccagcgcttgaccctgagggcgtgttc ctttttgggaagatgagcccacacgcagtccagtttgaaggtgccctgtgtcagttcagt atctaccccgtgacgcaggtcgctcacaattactgtacccacctgagaaagcagtgtgga caggctgacacgtaccggccccagctgggacccttcctcccccgaggctctggcacaccc ctcaccttccagaccgaccttgccctgctgggcctggagaacctgaccactgccacgcca gcccgggcgtcacagccagcaggcagggggcccagggtgactgtgatgcctgccgtgccc gccaagcccctaaggactaacagcacaggcccgcaccagcccttcacgggtggaggccca gcccggaccctccggccacctgccaggctgtcagccagtgaagggctgtctcccgtgccc ccagcctctcctgccagctccaccaggcctgtccagccactgcagaagagcacagccacc aaaatccccaaaagtcaccccaccaagccttcggccccttctccttggatggcccctgtc aaaagtccccgccccacccggaaggcagctccgccttccttcacaaaggcagcgccccca accaagaagccggtgctacccacctcccacccagctcctgacagagtctcctgtcccaca gtgaagcctatccagaggaaccctgtgacgcccagacagccagcacccagcacccggccc ctacctcctgctgccagctcctctaagaggtcttttcccccagtggtccaggcagaggcc aagacgagcagtcatgtcagtgagctagcccctgcccgcaccaacacgcacacacctccc cgacccgccggcctgcccccatcacctgcccccagtcctagggcttccaggactgctcgg ccccaggccacagcgatgcctcccaccctcgctcctggttcagcccccactggaagcaag aaacccactggaccagaagccgcaaagaaagtcagatccaagagcagcccctggaaggcc gtccctctcagacctgggaaggcagccagggatgtcccagttaaccatccgacaactggg ccgagccccaggcagctgcggcccagccagcagaccaccccggccccggtgctggccccg gcgccattcctgtcctccagcccccagcccatgagcactggctcttcgttcttccacctg gtgggacccacacctttcctgctgctgatgggacctccggggcccaagggagactgtggt ttaccgggtccccctgggctgcctgggctccctggacctcctggtgcacggggtcctcgg ggtcctcctgggccttatggaaatccaggcctccccggccctcctggagccaaaggacag aaaggggaccccgggctctcaccaggaaaggctcacgacggggcaaagggcgacgagggc ttgcctgggctctctgggaatccaggacctcttggacgaaagggacacaagggctatcct ggaccggcggggcaccccggagaacaggggcagccgggacccgagggcagcccaggggcc aaaggttaccctggcaggcaggggttacctggacctgtaggaaaccctggccccaaaggc agccggggctacattggactcccagggctcttcggcctgccagggtccgatggagagcga ggtctacccggcgttcctggcaagaggggcaagatgggtaggccggggtttcctggagac tttggggaaagaggccctccgggactggatggaaaccccggagaactgggcttaccaggg cccctaggagtccctggcctcatcggcgacatgggagcattgggtccaattggctaccca ggacccaagggcatgaagggactgatgggagacgtgggggaacccggactgaaaggtgat aagggtgaacaaggggttccgggtgtgtcaggagataccggattccaaggagacaagggg agccagggattaccagggttcccaggcgcacgggggaagccagggcctgtgggcaaagtt ggagacaaaggatccgttgggtttcctgggccccctggacccgagggatttcccggagac attggcccccctggggacaacggccaggaaggcatgaagggtaagcctggagctcgaggc ctgccgggaccccgtgggcagctggggccagagggagatgagggacccatggggccaccg ggggcccctggcttggagggtcaacccggcagaaaggggtttcctggaagacctggcccg gatggcttgaagggagaaccaggcaatcccggacggccggggcccgtgggtgagcaggga cttctgggattcattggtctggtcggggagccaggaatcatgggagaaaagggtgaccgg ggcatgatgggacccccaggcgcgcccggacccaaggggtcgatgggtcatcctggaact ccaggtggtgttgggacccccggagagcctggacctatgggtcctccaggatctcgaggc ccgctgggcatgaggggagcaaagggacgccggggaccccgaggaccagatggaccagct ggggagcaggggtccaagggtctgaagggccccacaggactacagggcagaccaggccag cctgggcagcagggcgtggctggcgagcgagggcacctgggcacacgaggctttcctggc atcccgggtccctccggccccccaggtaccaagggcctcccaggagaaccgggccctcag ggaccccaggggccagttggccctccaggagagatgggacccaaggggctaccaggtgca gtgggagaaccaggccttcctggggaagctggaatgaagggtgaccttgggcctctgggc acccctggggagccgggcctcatcgggcagcggggagagccaggcctcgagggtgacagt ggccctgcagggcccgacgggctgaagggggacaggggtgaccccgggcccgacggtgaa cgtggcgagaagggccaggagggactgaagggtgaggacgggccgcctggcccccctggc atcactggcgtccggggtcctgaaggaaaaccagggaagcaaggcgagaagggccgcatg ggagccaagggtgccaagggctaccaaggacagctgggtgagatgggcgtccctggagac cccggaccccctggcaccccaggccctaaagggtcccggggcagcctgggaccaacgggt gctccaggacggatgggggcccaaggagaaccgggactggctggttacgatggacacaaa ggcatcatgggacccctcggacctcctggaccaaagggcgaaaagggggagcagggtgag gatggcacggccgaggggcaccccgggccacctggagatcggggccctgtgggtgatcga ggagaccgcggggagccaggggactctggatacccgggacaggagggtgtacaaggcctc cgtggaaatccaggccagcagggccaacccgggcatccgggaccccggggacggccgggc cccaaaggatcgaaaggggacgagggaccaaagggaaagcaaggcaaggctgggggacca ggacggagggggatccagggcctgcaggggctgccggggcctcggggcgtggtggggaga cagggccccgagggtgtcgctggaccagatgggcttccaggccgggacggtcaagcagga cagcagggggagcagggagacgatggggaccctggccccatgggccctgctgggaagaga ggaaatccaggtgtggctggcttgcctggagcacaggggcccccaggattcaagggtgaa agtgggttactcgggcagctgggtccccctggcaaacgagggacggaaggcggaacgggg cttcctgggaaccagggggagcctggatccaaaggccagccgggtgactccggtgagatg ggattcccaggaatggctggcctcttcggacccaagggccccccaggagacattggcttc aaaggcatccagggccctcgggggcctcctggcttgatggggaaggaaggcatcattggg cccctaggattcctgggaccttcaggacaccagggtccgaagggtgacaaaggcaggcga ggggacttgggattgcaaggtccgaggggtcctcccggtcccagagggcagcccggccca ccgggtcctccagggagccctattcactttcaacaagatgaccttggggcagctttccag acgtggatggacgctagtggagcactgagagcagagggttacagccatccggaccggctg gtgctggaccagggaggggagatctttaaaaccttacactacctcagcagcctcatccag agcattaagacgcccctgggcaccaaagagaaccccgcccgggtctgccgggacctcatg gactgtgaacagaagatggtggatggtacctactgggtggatccaaaccttggctgctcg tccgacaccatcgaagtctcctgcaacttcacacatggtggacagacgtgtctcaagccc atcacagcctccaaggtggagtttgccattagccgggtccagatgaatttcctgcacctg ctaagctctgaggtgacacagcaaatcaccatccactgccttaacatgaccgtgtggcag gagggcaccaggcagaccccagctaagcaggctgtgcgcttccgggcctggaacgggcag atctttgaagccgggggtcagttcaggccggaagtgtcaatggatggctgcaaggtccag gatggccgctggcatcagacactcttcaccttccggacccaggacccccagcagctgccc attgtcagcgtggacaacctccctcctgcctcatcagggaagcagtaccgcctcgaagtt ggacctgcgtgcttcctctga

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