Orcinus orca (killer whale): 101288071
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Entry
101288071 CDS
T05247
Symbol
CBX4
Name
(RefSeq) E3 SUMO-protein ligase CBX4
KO
K11452
E3 SUMO-protein ligase CBX4 [EC:2.3.2.-]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101288071 (CBX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101288071 (CBX4)
03036 Chromosome and associated proteins [BR:
oor03036
]
101288071 (CBX4)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
101288071 (CBX4)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
101288071 (CBX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
CBX7_C
Motif
Other DBs
NCBI-GeneID:
101288071
NCBI-ProteinID:
XP_012390525
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Position
19:complement(31953759..31964839)
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AA seq
627 aa
AA seq
DB search
MSSCAAAARAQLSQRARAGSRGGRGQRRAAGLCWASGGGGGAGGGGASAGAAAGRRREPA
ASAAAPAARAPARSGSAMELPAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWE
PEENILDPRLLIAFQNRERQEQLMGYRKRGPKPKPLVVQVPTFARRSNVLTGLQDSSADN
RAKLELGGQGKGQGHQYELNSKKHHQYQPHSKERAGKPPPPGKSGKYYYQLNSKKHHPYQ
PDPKMYDLQYQGSHKEAPSPTCPDLGAKSHPPDKWAHGGGAKGYLGAVKPLAGAVGAPGK
GSEKGPPNGMTPAPKEAVTGNGIGGKMKIVKNKNKNGRIVIVMSKYMENGMQAVKIKSGE
AAEGEARSPSHKKRAAEERHPPADRTFKKAAGAEEKKVETPSKRREEEGPGAGDPQPQEA
GSRKLSPTKEAFGEQPLQLTTKPDLLAWDPPRGTQLPSHHHHHHHHHHHHHAVDLNLSHA
RKRCLSETHGEREPCKKRLTARSISTPTCLGGSPTAERPADVPPAAALPQPEVILLDSDL
DEPIDLRCVKTRGEAGEPPSALQVKPEAPATAAVAAAPATAAEKPPTEAQDEPEEPLSEF
KPFFGNIIITDVTANCLTVTFKEYVTV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtgcagccgcggcccgggctcagttgtctcagcgagcgcgagccgggagc
cggggcgggcgcgggcagcggcgggcggccgggctgtgctgggcgagcggcggcggcggc
ggcgcgggcggcgggggcgcctcggccggggcggcagcggggcgccggcgggagccagca
gcgtctgcagccgcgccggccgcccgcgccccggcgcgctccggctcggccatggagctg
ccagctgttggcgagcacgtcttcgcggtggagagcatcgagaagaagcggatccgcaag
ggcagagtggagtatttggtgaaatggagaggctggtcccccaaatataacacgtgggaa
cccgaggagaacatcctggatccccggctgctgatcgccttccagaacagggaacggcag
gagcagctgatgggatatcggaagagagggccgaagcccaaaccactggtggtgcaggta
cctacctttgcccgtcgttccaacgtgctgaccggactccaggactcctcggctgacaac
cgcgccaagctggagctgggtggtcagggcaagggccaggggcaccagtacgagctcaac
agcaagaagcaccaccagtaccagccgcacagcaaggagcgggcaggcaagcccccaccg
ccaggcaagagcggcaaatactactaccagctcaacagcaagaagcaccacccctaccag
ccggaccccaaaatgtatgacctgcagtaccagggcagccacaaggaggcgcccagcccc
acctgcccggacctaggcgccaagagccacccgcccgataagtgggcccacggcgggggt
gccaagggctacctgggagcggtgaagcccctggccggtgcggtcggggctccaggcaag
ggctccgagaagggtccccccaacgggatgacgccggcccccaaggaagcggtgacgggc
aacgggattgggggcaagatgaagatagtcaaaaacaagaacaagaacggacgcatcgtg
atcgtgatgagcaagtacatggagaatggcatgcaggcagtgaagatcaagtccggggag
gcagccgagggcgaggcgcgctcccccagccacaagaagcgggctgccgaggagcgtcac
ccccctgcagacaggactttcaaaaaggccgcgggggcggaggagaagaaggtggaaacg
ccctccaagaggagggaggaggaagggccgggggccggggacccgcagccccaggaggcc
ggctcccgcaagctctccccgaccaaggaggccttcggcgagcagccgttgcagctcacc
accaagcctgacctgctggcctgggacccgccccgcggcacacagctgccctcccaccat
caccaccaccaccaccaccatcaccatcaccacgccgtcgacctaaatctctcccacgcg
cgcaagcgctgcctctccgagacccacggcgagcgagagccctgcaagaagcgcctgaca
gcgcgcagcattagcacccccacctgcctggggggcagccccaccgccgagcgcccagcg
gacgtgccccccgctgccgccctcccgcaaccggaggtcatcctgctggactcggacctg
gacgagcccatagacttgcgctgcgtcaagacgcgcggcgaggccggggagccgcccagc
gccctccaggtgaagcctgaggcgcccgcaaccgcggcggtggcagctgcgccggcaacg
gcggccgagaagcctccgaccgaggcccaggacgagcccgaggagccactcagcgagttc
aaacccttctttgggaatataattatcaccgacgtcaccgcaaactgcctcaccgtcacg
ttcaaggagtacgtgacggtgtag
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