Orcinus orca (killer whale): 101288456
Help
Entry
101288456 CDS
T05247
Symbol
SHROOM2
Name
(RefSeq) protein Shroom2 isoform X1
KO
K18625
protein Shroom
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oor04812
]
101288456 (SHROOM2)
Cytoskeleton proteins [BR:
oor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
101288456 (SHROOM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
101288456
NCBI-ProteinID:
XP_004265568
LinkDB
All DBs
Position
X:6950938..7086425
Genome browser
AA seq
1559 aa
AA seq
DB search
MEGAEPRVRPERLAEAEARAADGGRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGS
KAAAVDKLLAGDEIVGINDISLSGFRQEAICLVKGSHKTLKLVVKRRTELSWRPHSWHVT
KFSDSHPETSASPFPSTSSCPLWPGQHHASSSSQDLSSGLWEQTHLQRASDHFSSLGSVD
SLDQPAQSYPSGRLSAAKSNSSIDHLGGPSKRDSAYGSFSTSSSTPDHTLPKADASSAEN
ILYKVGLWEASTGGSDRQGLAAGDPQCVDERLGCFPPRVPCDSSRSPRPEDSPEPKLAAS
GRSSFGPVWYVPDKKKASSSPPPPPPPLRSDSFAATKSHEKTQGPPFSEVATTQHPPGLT
RAPSHSDWRPEAADQPQRPARLGDGRRAGSSGCAPGVPLDCGWPPCDSGARALPGAPSRL
QASLSSTDVRCPPPSPACQHPRHSSDESPFFHEGPGAATWLREQPPAERFPDDSPAPVGR
PSAGDQKGDGGAQSRYYCVTSRRGPQGGAPAAQPRCYPPRLEGPPGARQRGRVAPADREA
GGHCEGAEEPPAAGLVETASVKRVAGGFAWGHAGGEICPLQTPMLHSLTQEGARRPEAGH
EGAPERPPPEAPAGKPMRRSDRFATTLRNEIQLRRARLQKSRSTATLAGAAEGDETTAEA
EARDWGVQPAGGAPEAAFSSTYKDHLKEAQARVLRATSFRRRDLEPSPSDPDTLPRVWEA
APARLPSSAGGALHAPRIAGRRRFTAEQKLKSYSEPEKMNEVGLAGDERPRQRPAPPDET
VRTFVDRWKFFEETSKPVGQRSGLRPAPCGFPKEKPERPWTAGPGKEGKVGRSDPPQRLG
TFAEYQASWREQRKAPEARSSGRYHSADNILDVGLDQHERPQYIHGRSRSSPSTDLYKQE
ASVEVRRQTEDPGARRELSSSVQAEEGRPTPRQADAPCAEDSPGAQRDPQQPSQVSEPAG
SREAPEVPPEGRGRAGTLPCDYRYPEERAPADRPAAPHARGQDPRPLSAAPLSRRPAPQR
PPPPRREPRPLAGAPAPAHLGAPGRPRPLAPEVCSCSDRPALARCSPGASAEKPSAARPA
ADGPRAAGEPAGQHVDERAGWPRREAPLLSKFRPLQTSAMETSRSPSPQFAPQKLTDKPP
LLVQDDNSTRIERVMDNNTTVKMVPIKIVHSESQPEKESRQGLARVPEPPVLPSGLERDQ
IKTLSTSEQSYSRFCLYSRQGAEPQPPGTLVPTAKDSRASTPTLSYVKAKERTAEDLKSE
ELAREIAGKDKSLADILDPSVKIKTTMDLMEGIFPKDEHLLEEAQQRRKLLPKIPSPRTT
EEKKEELSVPAAVSLATNSTYYSTSAPKAELLIKMKDLQDQQEAEEDSGSDADHDLSVKK
QELIESIGRKLQVLRQARQSLREDMQANSALGDEVEALAKAVCKPNEFDKFRMFIGDLDK
VVNLLLSLSGRLARVENALNNLDDGTAPGDRQSLLEKQRVLIQQHEDAKELKENLDRREG
IVSDILASYLSQDSLADYAHFVRMKSALLIEQRELEDKIHLGEEQLKCLLDSLPPDRGK
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcagagccccgtgtgcggccagagcgcctggcagaggccgaggcgcgggcg
gccgatggcgggcgcttggtggaggtgcagctgagcggcggcgccccttggggcttcacc
ctgaagggcggccgcgagcacggcgagccgctggttatcacgaagatcgaagaaggaagc
aaagccgcggcagtggacaagttgttggccggagatgagatcgttggcatcaacgacatc
agtctgtcggggtttagacaggaagcgatttgcctggtgaaggggtcgcataagaccctg
aagctggtggtgaaaaggaggactgagctgagctggaggccacactcctggcacgtcacc
aagttctccgacagccaccccgagacatcggcatctccattcccctctaccagctcctgc
cccttgtggccaggccagcaccacgccagctcttcgtcccaggacctgtcgagcggcctg
tgggagcagacgcatctgcagcgcgcctctgaccacttcagctccctggggagtgtggac
agcctggaccagcctgcccagtcctacccgtccgggcgcctctcggctgccaagtccaac
agcagcatcgaccacctgggcggcccgagcaagcgggactccgcttacggctccttttcc
accagctccagcacgcctgaccacaccctgcccaaggcggatgcctcctctgctgagaac
atcctctacaaagtaggcctttgggaggcctccaccggaggcagcgaccggcagggcctg
gctgccggcgaccctcagtgtgtggacgagaggctcgggtgcttcccccccagggtcccc
tgtgacagcagcaggagccccaggcccgaggacagccctgagcccaagctagctgcttcc
gggaggtccagttttgggccagtctggtatgttcccgataagaagaaggcctcttcgtcc
cctcctccgccccctccccctctccgcagtgacagctttgcggccaccaagagccacgag
aagacccagggccctccattctcagaggtggccaccacgcagcaccctccgggcctgacc
cgcgctccgtcccacagcgactggcgaccggaagcggccgatcagccgcagagaccagcg
cgcctgggcgacgggaggagagccggaagctcgggctgcgcgccgggtgtccccctggac
tgcgggtggccgccgtgcgacagcggggccagggccctcccgggggcccccagccggctc
caggcctccctgtccagcacggacgtgcgctgcccgccaccttcgcccgcgtgccagcac
ccgcgccactccagcgacgagagccccttctttcacgaggggcccggtgccgccacgtgg
ctcagggagcagccgcctgccgagcgcttcccggatgacagccccgctccggtggggcgg
cccagcgctggcgaccagaagggggacggtggcgcgcagagccgctactactgtgtgacc
tccagacgcggcccgcagggcggcgccccggccgcgcagcctcgctgctacccgccccgg
ctcgaggggcccccgggcgcccggcaaagggggagagtggcgccggcggacagggaggcc
gggggccactgcgagggagccgaggaaccgcccgcggctggcctcgtggaaacggcgagt
gtgaagagggtcgcaggcggctttgcgtggggccacgcgggcggcgagatctgccccctg
cagacgcccatgctgcactcgctgacccaggaaggggcgcgccggcccgaggccggccac
gagggcgccccggagaggcccccgcccgaggccccggcgggcaaacccatgcggaggagc
gaccgtttcgccaccaccctgaggaacgagatccagctgcggcgagccaggctgcagaag
agccggagcacggcaaccctggccggcgccgcggagggggacgagaccaccgccgaggca
gaggcgcgcgactggggggtgcagccggcagggggcgccccggaagccgccttctccagc
acatataaggaccacctgaaggaggcgcaggcccgcgtcctgagggccacgtcgtttagg
cgccgcgacctggagcccagcccgtcggaccccgacaccctccctcgcgtctgggaggca
gccccggccaggctgccctcgagcgccggtggcgcgctgcacgccccgcgcatcgcaggc
cggaggcgcttcacggccgagcagaaactgaagtcctactccgagcccgagaagatgaac
gaggtagggctcgcgggggatgagcgcccgcgccagcgccccgcgcctcccgacgagacc
gtgcgcacctttgtcgacaggtggaagttttttgaggaaaccagcaagcccgtaggccag
cggtcggggctgaggccggcaccctgtgggttcccgaaggagaagccagagaggccttgg
acagcgggccccggaaaggagggaaaggtggggagatcagacccacctcagaggctggga
acctttgcagagtatcaagcctcgtggagggaacagaggaaagccccggaagccaggagt
tctgggaggtaccactcggcagacaacatcctggacgtgggtctggaccaacacgagagg
ccacagtacatccacggaaggtcccggtcgtcgccctcgaccgacctctacaagcaggaa
gcttctgtggaagtgcgacggcaaacggaggaccccggtgcgcgcagagagctttcttcc
tcagtccaggccgaggagggacgccccaccccaagacaagcagatgccccgtgtgcagaa
gacagtccaggagcgcagcgggacccccagcagccgtcccaggtctctgaaccagctggc
tcccgggaagctcccgaggtgcccccggagggccgtggccgggcggggacccttccttgc
gattacagatacccggaggaacgcgcgcccgcggaccggcctgccgccccgcatgcccgg
gggcaggacccccggcccctgagcgccgccccgctctcccggaggcccgccccacagagg
ccgccgccgcccaggcgtgagcccaggcccttggcgggcgcacctgcgcctgctcacctg
ggcgcgcccggcaggccccgccccctggccccggaggtgtgctcgtgctcggaccgcccg
gccctcgcccgctgcagccccggcgcctcggcggagaaaccgagcgccgcccggcccgcg
gcagatggcccgcgggctgcgggggagccggccgggcagcatgtagacgagcgcgcaggc
tggccccggcgggaggcgccgctcctttccaagttccggcccttgcagacctccgccatg
gagacctcgcgctccccgtcgcctcagttcgcgccgcagaagctgacggacaaacccccg
ctgctcgtccaggatgataattccaccagaatcgagcgggtgatggacaacaacaccacg
gtgaagatggtgcccatcaagatcgtgcactcggaaagccagcccgagaaggagagccgc
cagggcctggcccgcgtcccggagccacccgtgctgcccagcgggctcgagcgggaccag
atcaagacgcttagcacgtccgagcagtcctactcccgcttctgcctgtacagccgccag
ggcgccgagccccagccccctggcaccctggtgcccacggccaaggacagccgggcctcc
acgcccacactcagctacgtgaaggccaaagagaggactgccgaagacctcaagtcggag
gagctggcccgcgagatcgcgggcaaggataagtccctggcggatatcctggaccccagc
gtgaagatcaaaaccaccatggaccttatggagggcatcttccccaaagacgagcacctc
ttggaggaagctcagcagcggaggaagctgctccccaaaatcccctctcccagaaccaca
gaggagaagaaggaggagctgagtgtgccggcagccgtgtccctggccaccaactccacc
tactacagcacatcggcccccaaggcggagctgctgattaagatgaaagacctgcaggac
cagcaagaagccgaagaggattcagggagtgacgccgaccacgacctgtcggtgaagaag
caggagctcatcgagagcatcggtcgcaagctgcaggtgctgcggcaggcgcggcagagc
ctgcgggaggacatgcaggccaacagcgcgctgggcgacgaggtggaggccctggccaag
gccgtctgcaagcccaacgagttcgacaagttccgcatgttcatcggggacctggacaag
gtggtgaacctcctgctgtcgctgtccggccgcctggcccgcgtggaaaacgccctcaac
aatctggacgacggcactgctcctggcgatcggcaatcgctgctcgagaagcagcgggtc
ctgatccagcagcacgaggacgccaaggagttgaaggagaacctggaccgccgggagggc
atcgtgtccgacatcctggccagctacctcagccaggacagcctggccgactacgcgcac
ttcgtgaggatgaaatcggccctcctcatcgagcagcgcgagctggaggacaagatccac
ctgggcgaagagcagctcaagtgcctgctggacagccttccgcccgacagaggcaaatga
DBGET
integrated database retrieval system