Orcinus orca (killer whale): 101288838 Help Entry 101288838         CDS       T05247                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism oor  Orcinus orca (killer whale) Pathway oor04611   Platelet activation oor04820   Cytoskeleton in muscle cells oor04926   Relaxin signaling pathway oor04933   AGE-RAGE signaling pathway in diabetic complications oor04974   Protein digestion and absorption oor05146   Amoebiasis oor05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:oor00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101288838 (COL3A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     101288838 (COL3A1)   09152 Endocrine system    04926 Relaxin signaling pathway     101288838 (COL3A1)   09154 Digestive system    04974 Protein digestion and absorption     101288838 (COL3A1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     101288838 (COL3A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     101288838 (COL3A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101288838 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oor00536]     101288838 (COL3A1) Glycosaminoglycan binding proteins [BR:oor00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101288838 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  101288838 NCBI-ProteinID:  XP_004276973 LinkDB All DBs Position 7:75460969..75499756 Genome browser AA seq 1464 aa AA seqDB search MMSFVQKGIWLLFALLHPTVILAQQEVVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSV LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPTGQGPQGPKGDPGPPGIPGRN GDPGIPGLPGSPGSPGPPGICESCPTGSQNYSPQYEAYDVKSGVTGGITGYPGPPGPPGP PGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGSPGAIGPLGPAGKDGESGRPGRPGE RGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGDQGAPGLKGENGLPGENGSPGAMGP RGPAGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGS SGSPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPSGT NGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGLKGEDGKDGSPGEPGANGLPGA AGERGMPGFRGPAGANGLPGEKGPPGERGGPGPAGSRGAPGEPGRDGLPGGPGLRGMPGS PGGPGSDGKPGPPGSQGETGRPGPPGSPGSRGQPGVMGFPGPKGNDGAPGKNGERGSPGG PGPQGPAGKNGETGPQGPPGPTGPGGDKGDTGSPGPPGLQGLPGTGGPPGENGKPGEPGP KGEAGAPGIPGGKGDSGAPGERGPTGPAGPPGPRGGTGPPGSEGGKGPAGSPGPPGNAGS PGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGE SGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGI AGPPGSAGPSGAPGPPGVKGERGSPGGPGAAGFPGGRGPIGPPGNNGNPGPPGAGGPPGK DGPPGPAGNNGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIIGVPGARGLAGP PGMAGARGSPGPQGPKGESGKPGLSGLNGERGPPGAQGLPGLAGAAGEPGRDGNPGSDGL PGRDGAPGSKGDRGENGSPGPPGAPGHPGPPGPVGAAGKSGDRGETGPAGPSGAPGPVGS RGPPGPQGPRGDKGETGERGANGIKGHRGFPGNPGAPGSPGPSGHQGAVGSPGPAGPRGP VGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCPGGT GAILGIGGEKSGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLLSPDGSRKNPARNC RDLKFCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCINASPLTVPRKNWWTNSAAE KKHVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSQASQNITYHCKNSIAYMDHA SGNVKKALRLMGSNDGEFKAEGNGKFTYSVLEDGCTKHTGEWGKTVFEYRTRKAVRLPIV DIAPYDIGGPDQEFGVDVGPVCFL NT seq 4395 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggatctggttacttttcgccctgcttcatcccactgtt attctggcacaacaggaagttgttgaaggaggatgctcccatcttggtcagtcctatgcg gatagagatgtctggaaaccagaaccatgccaaatatgcgtctgtgactcaggatctgtt ctctgtgatgacataatatgtgatgaccaagaattagactgtcccaaccccgagatccca tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctact ggtcaaggacctcaaggccccaaaggagatccaggtcctcctggtattcctgggagaaat ggtgatcctggtattccaggactgccaggttcccctggttctcccggccctcctggaatc tgtgaatcgtgcccaactggtagccagaactattctccccagtatgaggcatatgatgtc aagtctggagtaacaggaggaatcacaggctatcccgggccacctggtccgcccggccca cctggtccccctggtacatctggtcatcctggttcccctggttctccaggataccaaggt ccccctggtgaacctgggcaagctggtcctgcaggtcctccaggatctcctggtgctata ggtccattaggtcctgccggaaaggatggggaatcaggaagacccggacggcctggagag cgaggactgcctggccctccaggtattaaaggtccagctggcatgcctggattccctggt atgaaaggacatagaggctttgatggacgaaatggagaaaaaggtgatcaaggtgctcct ggattaaagggtgaaaatggccttccaggtgaaaatggatctcctggagcaatgggtcca agaggacctgctggtgagagaggacgaccaggacttcctggagctgcaggggctcgaggt aatgatggagctcgaggaagtgatggacagccaggtccccctggtccccctggaactgca ggattccctggttcccctggtgctaagggtgaagttggacctgcgggatctcctggttct agtggctcccctggacaaagaggagaacctggacctcagggacatgctggtgctccaggt cctcctggccctcctgggagtaatggtagtcctggtggtaaaggtgaaatgggtcctgct ggcattcctggggcccctggactgataggagcccgcggtcctccaggaccctctggtaca aatggtgctcccgggcagcgaggtgctgcaggtgaacctggtaagaatggagccaaagga gagccaggaccacgtggggaacgcggggaggctggttctccaggtattccaggacttaag ggtgaggatggcaaagacggttctcctggagaacctggtgcgaacggacttcccggagct gcaggagaaaggggtatgcctggattccgaggacctgctggagcaaatggccttccagga gaaaagggtccccccggggagcgtggtggtccaggccctgcagggtccagaggagctcct ggagaacctggccgagacggcctccctggaggtccaggattgaggggtatgcctggtagt cctggaggaccaggaagcgatgggaaaccagggcctcccggaagtcaaggagaaactggt cgaccaggtcctccaggctcacctggttcccgaggtcagcctggtgtcatgggtttccct ggtcctaaaggaaatgatggcgctcctggaaagaatggagaacgtggtagtcctggaggt cctggccctcagggtcctgctggaaagaatggcgagactggacctcagggtcccccagga cctaccgggccaggtggtgacaaaggagacacaggaagccctggtccaccaggattacaa ggcttgcctggaacgggtggtcctccgggagaaaatggaaaacctggtgaacctggccca aagggtgaggctggtgcacctggaattccaggaggcaagggtgattctggtgcccctggt gaacgtggacctactggacctgcagggccccctgggcctagagggggaactggcccccct ggttctgaaggaggaaagggccctgctggttcccctgggccacctggtaatgctggttca cctggtctgcaaggaatgcctggagaaagagggggtcctggaggccctggtccaaaaggt gataagggtgagcccggcagttcaggtgtcgatggtgctccagggaaagatggtccaagg ggtcctactggtcccattggtccccctggcccagctggtcagcctggagataagggtgaa agtggtgcccctggacttccgggtatagctggtcctcgtggtggccctggtgagagaggt gaacatgggccaccaggacctgccggcttccctggtgctcctggccagaacggtgagcct ggtggtaaaggtgaaagaggcgctcctggtgagaaaggtgaaggtggacctcctggaatc gcagggccccccggaagtgctgggccttctggtgcccctggtcccccaggtgtcaaaggc gaacgtggcagtcctggcggtcctggtgctgctggcttccctggtggtcgtggtcctatt ggtcctcctggcaataatggtaacccaggccccccaggagccggtggccctccaggcaaa gatggccccccaggtccagctggtaataatggtgctcctggcagccctggggtgtctgga ccaaagggtgatgctggccaaccaggtgagaagggatcacctggcgcccagggccctccg ggagctccaggcccacttgggattataggggttcctggagcacgaggtcttgcaggccca ccaggcatggcaggtgctaggggcagccccggcccacagggccccaagggtgaaagtggg aagccaggacttagtggtctcaatggagaacgtggtcctcctggagcccagggtcttcct ggtctggctggtgcagctggtgaacctggaagagatggaaaccctggatcagatggtctg ccaggccgagatggagctcctggtagcaagggtgaccgtggtgaaaatggctctcctggc ccccctggtgctcctggtcatccaggcccccctggccctgtcggtgcagctggaaagagt ggtgacagaggagaaactggccctgctggtccttctggtgctccaggtcctgttggctca agaggtcctcctggtccccaaggcccacgtggtgacaaaggtgaaacgggtgaacgtggc gctaatggcatcaaaggacatcgtggattccctggtaatccaggtgccccaggttcccca ggtccctctggtcaccaaggtgcagtaggtagtccaggacctgcaggccccagaggacct gttggacccagtgggccccctggcaaagatggaacaagtggacaccctggtcccattgga ccaccagggcctcgaggtaacagaggcgaaagaggatctgagggctccccaggccaccca ggacaaccaggccctcctgggccccctggtgcccctggtccatgctgtcctggtgggact ggtgccatccttggcattggaggtgaaaaatctgggggttttgccccatattatggagat gaaccaatggatttcaaaatcaacaccgacgagattatgacgtcactcaaatcagtcaat ggacaaatagaaagcctccttagtcctgatggttcccgtaaaaaccctgctcggaactgc agagacctgaaattctgccatcctgaactcaagagtggagaatattgggttgatcctaac caaggttgcaagatggatgctattaaagtatactgtaacatggaaactggggaaacgtgc ataaatgccagtcctttgactgttccacgtaagaactggtggacaaattctgctgctgag aagaaacatgtttggtttggagaatccatggatggtggttttcagtttagctatggcaat cctgaacttcctgaagatgtcctcgatgtccagctggcattcctccgacttctctccagc caggcctcccagaacatcacatatcactgcaagaatagcattgcatacatggatcatgcc agtgggaatgtgaagaaagccttgaggctgatgggctcaaatgacggtgaattcaaggct gaaggaaatggcaaattcacctactcagttctggaggatggttgcactaaacacactggg gaatggggcaaaacagtcttcgaatatcgaacacgcaaggccgtcagactacctattgta gatattgcaccctacgatattggtggtcctgatcaagaatttggtgtggacgttggccct gtttgctttttataa

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