Orcinus orca (killer whale): 101289319
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Entry
101289319 CDS
T05247
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101289319 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101289319 (SNRPA)
Spliceosome [BR:
oor03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
101289319 (SNRPA)
Complex B
101289319 (SNRPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
101289319
NCBI-ProteinID:
XP_012389006
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All DBs
Position
20:47137745..47148683
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AA seq
282 aa
AA seq
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MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPA
AKKAVQGGAAAPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQI
PPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcccgagacccgccccaaccacactatttatatcaacaatctcaacgagaag
atcaagaaggatgagctgaagaagtccctgtacgctatcttctcccagtttggccagatc
ctggatatcctggtgtcacgaagcctgaagatgaggggccaggcctttgtcatcttcaag
gaggtcagcagcgccaccaatgccctgcgctccatgcagggtttccccttctacgacaag
cccatgcgcatccagtacgccaagactgactcggatatcattgccaagatgaagggcacc
tttgtggagcgggaccgcaagcgggagaagaggaagcccaagagccaggagaccccggct
gccaagaaggccgtgcagggtggggcggccgcccctgtggtgggcgctgtccaggggcct
gtcccgggcatgccgccgatgacccaggcgccccgcatcatgcaccacatgccgggccag
cctccctacatgccgccccccggcatgatcccacctccgggcctcgcacccggccagatc
ccaccaggggccatgcctccacagcagcttatgccgggacagatgccacctgcacagcct
ctttcagaaaatccaccaaatcacatcttgttcctcacaaacctgcctgaagagaccaac
gagctcatgctttccatgcttttcaaccagttccctggcttcaaggaggtccggctggtc
ccagggcggcacgacatcgccttcgtggagtttgacaatgaggtgcaggcaggggccgca
cgcgacgccctgcagggtttcaagatcacccagaacaacgccatgaagatctcctttgcc
aagaagtag
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