Orcinus orca (killer whale): 101289458 Help Entry 101289458         CDS       T05247                                  Symbol COL1A2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism oor  Orcinus orca (killer whale) Pathway oor04151   PI3K-Akt signaling pathway oor04510   Focal adhesion oor04512   ECM-receptor interaction oor04611   Platelet activation oor04820   Cytoskeleton in muscle cells oor04926   Relaxin signaling pathway oor04933   AGE-RAGE signaling pathway in diabetic complications oor04974   Protein digestion and absorption oor05146   Amoebiasis oor05165   Human papillomavirus infection oor05205   Proteoglycans in cancer oor05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:oor00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101289458 (COL1A2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101289458 (COL1A2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101289458 (COL1A2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101289458 (COL1A2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     101289458 (COL1A2)   09152 Endocrine system    04926 Relaxin signaling pathway     101289458 (COL1A2)   09154 Digestive system    04974 Protein digestion and absorption     101289458 (COL1A2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     101289458 (COL1A2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101289458 (COL1A2)   09174 Infectious disease: parasitic    05146 Amoebiasis     101289458 (COL1A2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     101289458 (COL1A2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101289458 (COL1A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oor00536]     101289458 (COL1A2) Glycosaminoglycan binding proteins [BR:oor00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101289458 (COL1A2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  101289458 NCBI-ProteinID:  XP_004265635 LinkDB All DBs Position 9:57580311..57615835 Genome browser AA seq 1366 aa AA seqDB search MLSFVDTRTLLLLAVTSCLTTCQSLQEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG PPGPPGPPGPPGLGGNFAAQYDGKGVGIGPGPMGLMGPRGPPGASGVPGPQGFQGPPGEP GEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR GHNGLDGLKGQPGTPGVKGEPGAPGENGIPGQVGARGLPGERGRVGAPGPAGARGSDGSV GPVGPAGPLGAAGPPGFPGAPGPKGEIGPVGNPGPAGPAGSRGEVGLPGVSGPVGPPGNP GANGLHGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNK GEPGAAGPTGPPGPSGEEGKRGTTGEIGSAGPPGPPGLRGNPGSRGLPGADGRAGVMGPH GSRGGTGPAGVRGPSGDSGRPGEPGLMGPRGFPGSPGNVGPAGKEGPMGLPGIDGRPGPI GPAGARGEPGNIGFPGPKGPTGDPGKNGEKGHAGLAGPRGAPGPDGNNGAQGPPGPQGVS GGKGEQGPAGPPGFQGLPGPAGTAGEAGKAGERGIPGEFGLPGPAGPRGERGPPGESGAA GPTGPVGSRGPSGPAGPDGNKGEPGVVGAPGSAGPSGPNGLPGERGAAGIPGGKGEKGET GLRGDAGSHGRDGARGAPGAVGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPA GPNGFAGPAGAAGQPGAKGERGTKGPKGENGPTGPTGPVGAAGPAGPNGPPGPAGSRGDG GPPGATGFPGAAGRTGPPGPSGITGPPGPPGPAGKEGLRGPRGDQGPVGRTGETGASGPP GFVGEKGPSGEPGTAGSPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIA GPTGARGPPGAVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGDRGYPGNAGPTGTV GAPGPQGPVGPTGKHGHRGEPGPSGPIGLAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLP GLKGHNGLQGLPGLAGHHGDQGAPGTVGPAGPRGPSGPSGPSGKDGRTGHPGAVGPAGIR GSQGSQGPSGPPGPPGPPGPPGPSGGGYDFGFDGDFYRADQPRSPPSLRPKDYEVDATLK SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWVDPNQGCTMDAIKVYCDFSTG ETCIRAQPENIPVKNWYRSSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLL ANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK INEWRKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCFK NT seq 4101 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactctgttgctgcttgcagtaacttcgtgcctaaca acatgccaatctttacaagaggcaactgcaagaaagggcccaactggagatagaggacca cgtggagaaaggggtccgccaggcccaccaggcagagatggtgatgatggtatcccaggc ccacctggtccacctggtcctcctggtccccctggtcttggtgggaactttgctgctcag tatgatggaaaaggagttggaatcggccctggaccaatgggtttgatgggacctagaggc cctcctggtgcatctggagtccctggccctcaaggtttccaaggacctcctggtgagcct ggtgagcctggtcaaactggtcctgcaggtgctcgtggtccacctggccctcctggcaag gctggtgaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgttggg ccacagggtgctcgtggtttccctggaacgcctggactccctggcttcaagggcattagg ggtcacaatggtctggacgggctgaagggacagcctggtactccaggtgtgaagggtgaa cctggtgcccctggtgaaaatggaattccaggtcaagtaggagctcgtgggcttcctggt gagagaggacgtgtcggtgcccctggcccagctggtgcccgtggaagtgatggaagtgtg ggtcctgtgggtcctgctggtcctcttggggctgctggccctccaggcttcccaggtgct cctggccccaagggtgaaattggacctgtcggtaaccctggtcctgctggtcccgcgggt tcccgtggtgaagtgggtcttccaggtgtttctggccctgttggacctcctggcaaccct ggagccaatggccttcatggtgctaagggtgctgccggccttccaggcgttgctggggct cctggcctccctggaccccggggtattcctggccctgttggtgctgctggtgctactggt gccagaggacttgttggtgagcctggtccagctggttccaaaggagagagtggcaacaag ggcgagcccggtgctgctgggcccacaggtcctcctggtcccagtggcgaagaaggaaag agaggcaccactggtgaaattggatccgctggccccccaggacctcctgggctgagggga aatcctggttctcgtggtcttcctggagccgatggcagagctggtgtcatgggccctcat ggtagtcgtggtggaactggccctgctggtgtgcgaggtcccagtggagattctggtcgc cctggagagcctggcctcatgggaccccgaggttttcctggttcccctggaaatgttggc ccagctggtaaagaaggtccgatgggcctccctggtattgatggcaggcctggaccaatt ggcccagctggagcaagaggagagcctggcaacatcggattccctggacccaaaggcccc actggtgatcctggcaaaaatggtgaaaaaggtcatgctggtcttgccggtcctcggggt gctccaggtcctgatggaaacaatggtgctcagggacctcctggaccacagggtgtctca ggtggaaaaggtgaacagggtcccgctggtcctccaggcttccagggtctgcctggccct gcaggtacagctggtgaagctggcaaagcaggagaaaggggtatccctggtgaatttggt ctccctggtcctgctggtccaagaggggagcgtggtcccccaggtgaaagcggtgctgct ggtcctaccggtcctgttggaagccgaggtccttctggacctgcagggcctgatgggaac aagggcgaacctggtgtggttggtgctccaggctctgctggtccatctggtcctaatgga ctcccaggagaaaggggtgcggctggcatacctggaggcaagggagaaaagggtgaaact ggtctcagaggtgatgctggtagccacggcagagatggtgctcgtggtgctcctggtgct gtaggtgcccctggtcctgctggagccaacggggaccggggtgaagctggtcctgctggt cccgccggtcctgctggtcctcgtggaagccctggtgaacgtggtgaggttggtcccgct ggccccaatggatttgctggtcctgctggcgctgctggtcaacctggtgctaaaggagag agaggaaccaaaggacccaagggtgaaaatggccctactggtcccacaggccccgttgga gctgctggcccagctggtccaaatggtccccctggtcctgctggaagtcgtggtgatgga ggcccccctggtgctacgggtttccctggtgctgctggaaggactggtcctcctggaccc tctggtatcactggcccccctggtccccctggtcctgctggtaaagaaggacttcgtggg cctcgtggtgaccaaggtccagttggtcgaactggagaaacaggtgcttctggcccccct ggctttgttggtgagaagggtccctctggagagcctggtactgctggatctcctggcacc ccaggtcctcaaggtcttcttggtgctcctggttttctgggtctcccaggctctagaggt gaacgtggtctaccaggtgttgctggatctgtgggtgaacctggccctctcggcattgca ggcccaactggggcccgtggtccccctggtgctgtgggtaatcctggcgtcaatggtgct cctggtgaagctggtcgtgatggcaaccctgggaatgatggtcccccaggccgcgatggt caagctggacacaagggggatcgtggttaccctggtaacgctggtcccactggtactgtg ggtgcacctggtcctcaaggccctgtgggtccaactggcaaacatggacaccgcggtgaa cctggtccttctggtcccattggtctggccggtgctgttggtccaagaggtcctagtggc ccacagggtattcgaggtgataagggagagcctggtgataaggggcccagaggtcttcct ggcttaaagggacacaatggattgcagggtcttcctggtcttgctggtcatcatggcgat caaggtgctcctggcactgtgggtcctgctggtcctaggggcccttctggtccttctggc ccttctggcaaggatggtcgcactggacatcctggtgcagtcggacctgctggcattcgt ggctctcagggtagccaaggtccttctggccctcctggtcctcctggccctcctggccct cctggccccagtggtggtggttatgacttcggttttgatggagacttctacagggctgac cagcctcgctcaccaccatctctcagacccaaggattatgaagttgatgctactctgaaa tctctcaacaaccagattgagactcttcttactccagaaggctctaggaagaacccagcg cgcacatgccgtgacttgagactcagccacccagaatggagcagtggttactactgggtt gaccctaaccaaggatgtactatggatgctatcaaagtatactgtgatttctctactggc gaaacctgcatccgggctcagcctgaaaacatcccagtcaagaactggtacagaagttcc aaggccaagaagcacgtctgggtaggagaaactatcaatggtggtacccagtttgaatat aatgttgaaggagtaactaccaaggaaatggctacccaacttgccttcatgcgcctgctg gccaaccatgcctctcaaaacatcacctaccattgcaagaacagcattgcatacatggat gaggagactggcaacctgaaaaaggctgtcattctgcaaggatccaatgatgttgaactt gttgctgagggcaacagcagattcacttacactgttcttgtagatggctgctctaaaaag ataaatgaatggagaaagacaatcattgaatataaaacaaataagccatctcgcctgccc atccttgatattgcacctttggacatcggtggcgctgaccaagaaatcagattgaacatt ggcccagtctgtttcaaataa

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