Orcinus orca (killer whale): 101289846
Help
Entry
101289846 CDS
T05247
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04151
PI3K-Akt signaling pathway
oor04510
Focal adhesion
oor04512
ECM-receptor interaction
oor04820
Cytoskeleton in muscle cells
oor04926
Relaxin signaling pathway
oor04933
AGE-RAGE signaling pathway in diabetic complications
oor04974
Protein digestion and absorption
oor05146
Amoebiasis
oor05165
Human papillomavirus infection
oor05200
Pathways in cancer
oor05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101289846 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101289846 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101289846 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101289846 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101289846 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
101289846 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101289846 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
101289846 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101289846 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
101289846 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101289846 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oor04147
]
101289846 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
oor00536
]
101289846 (COL4A5)
Exosome [BR:
oor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101289846 (COL4A5)
Glycosaminoglycan binding proteins [BR:
oor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101289846 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101289846
NCBI-ProteinID:
XP_004281573
LinkDB
All DBs
Position
X:94998742..95216742
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGSDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGFPGPPG
IQGPAGPTGIPGPIGPLGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDQGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGEKGERGFPGIQGPPGLPGPPGLAVTGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLPGPPGPPGPHIPPSDEVCEAGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGVSGPPGEPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLTGIPGAPGAPGF
PGPKGEPGDVLTFPGMKGDKGDLGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNRGPMGPLGFGPPGPPGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPSGPPGFPGLKGEPGFGLPGPPGPPGLPGFKGILGPKGDRGFP
GPQGPPGQAGLDGLPGPKGDIGPNGQPGTMGPPGLPGTGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGEMGM
MGPPGPTGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPMDPDLL
GSKGEKGDPGLPGIPGVAGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGNIGDMGFPGPQGAKGSPGPPGVPGQSGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGIKGAMGDTGLPGLPGSPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGLPGPEGPRGLPGIGGIKGERGNPGQPGQPGLSGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGEPGSPGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDAGPPGV
PGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGHKGDPGLPGQPGIRGLDGP
PGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgt
agtggtataaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggccgccagggcctcggggacaaaagggtagtgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcactgccagggccaaagggtaatccaggatttcccggtcctcctgga
atacaaggcccagctggtcccactggtataccagggccaattggtcccctaggaccacca
ggtttgatgggccctcctggcccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccaagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtgattcctaggcctggaactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggccttcctggacctccaggacttgcagttacaggtcctcctgggccccctggc
tttcctggggaaaggggccagaaaggggatgaaggtccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggccttccagggcctcctggccctcct
ggccctcacatccctcctagtgatgaggtatgtgaagcaggccctcctggccctccagga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtgaacctggtttgccaggt
cttccaggtcccccaggatctcttggtttccctggacagaagggtgaaaaaggacacgct
ggtgcaaccggtcccaaaggattaacaggcataccaggagctccaggtgctccaggcttt
cccggacctaaaggtgaacctggtgacgtcctcacttttccaggaatgaagggtgacaaa
ggagatttgggttctcctggagctccagggcttcctggtttacctggcacccctggacag
gatggattgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagggggcctatg
ggccctcttggttttggccctccaggcccaccaggtgaaaaaggcatacaaggtgtagca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataaca
cagccagggaagcctggcttgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaacctggactcccaggccagccaggcttgccaggtatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggtttccctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggtccttctggg
ccaccaggctttccaggactaaagggagaaccaggatttgggctacctgggccacctggg
cctccaggactcccaggtttcaaaggaatacttggtccaaaaggggatcgtggtttccca
ggacctcaaggtcctccaggacaagctggcttggatgggctacctggaccaaaaggtgac
attggaccaaatggacaacctgggacaatgggacctcctgggctgccaggaacaggtgtt
cagggaccaccagggccaccaggaattcctggaccaataggtcaacctggcttgcatgga
ataccaggagagaagggggatccagggcctcctggatttgatgttccaggaccccctggt
gagagaggcagtccagggatccctggagcaccaggtcctatgggacccccaggatcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaacaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgcaggagagaaa
ggtagtaaaggagagcctggccttccaggccttcctggaccaatggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcctaccaggtattcctggagttgcagggcca
aaaggttatcagggtttgcctggagacccagggcaacctggactgagtggacagcctgga
ttaccaggaccgtcgggtcccaagggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaaacataggcgatatgggctttccaggcccccagggtgca
aaagggtctcctggacctcctggagttcctggacaatctggatccccgggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgccgggatacccagggaaccctggtatcaaaggtgctatg
ggagatactggtttgcctggattaccggggagccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttccaggt
ccaaagggtgaaccaggctttcatggtttccctggtctgcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcaaccctgggccccaaggtcctcca
gggagaccaggtctaccaggtccagaaggtccccggggtctccctggaattgggggcatt
aaaggagagagaggaaacccgggccaacctgggcaacctggtttgtctggtttgaaagga
gatcaaggaccaccaggactccagggtaatcctggacggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggagaa
cctggttcacctggccctgagggggatccaggacttattggccccccaggcccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgctggtccaccaggggtt
ccaggccagcctggattaaaaggtctaccaggactaccaggacctcaaggtttaccaggt
ccaattggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
gggcacaaaggagacccaggtttaccaggccagccaggtatccgtggtttggatggtccc
cccgggccagatggattgcaaggtcccccaggtccccctggaacctcctctgttgcccat
ggatttctcatcacacgtcacagccagacaacagatgcaccacaatgcccacagggaact
atccaggtttatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcacggt
caagacttgggaacggccggcagctgccttcgtcgcttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgactattcttactggctctcc
accccagagcccatgccaatgagcatggagcccctgaagggccagagcatccagccattc
attagtcgatgtgcagtatgtgaagctccggccgtggtgattgcagttcacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcacacaagtgcaggggcagagggctcaggtcaagccctggcctcccctggttcctgc
ttggaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacctgcaactat
tatgccaactcctacagcttttggctggcaactgtagatgtgtcagacatgttcagcaaa
cctcagtcagaaacgctgaaagcaggagacttgaggacacgtattagtcgatgtcaagtg
tgcatgaagaggacataa
DBGET
integrated database retrieval system
