Orcinus orca (killer whale): 101289997
Help
Entry
101289997 CDS
T05247
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X2
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101289997 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101289997 (SPATA13)
Membrane trafficking [BR:
oor04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101289997 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
101289997
NCBI-ProteinID:
XP_033265258
LinkDB
All DBs
Position
18:75402350..75666009
Genome browser
AA seq
1253 aa
AA seq
DB search
MLRKAVTTTAEPDVHGRREGQAGGLWEEGVREEPGDTEARVGLNRAALCPRAPGPQTMTT
AQNGHGRGAAVPGPISDPKDPGMVTYPACRREARLSPARLLRLFSAGANRTRADPERPRP
AGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGVA
AGAPAGRCPPGPGFASDGSDPEDPDDGFARGAPRSRSIRRAYGLGRIRLLDPEPPAPEPA
ACEAPAREPERNGVCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESGAPRRTLSGSS
ADSDSSGGAPARPRRCRSPLRAPDLARVLRLVGDGAAGRPGDPGGAPPGPRPHSRLHDDY
SRRAVAGPERGRRGEEPQDPGLAGAGGSASDAAAGGAVPRAPGSSSRPPVREVSDRGSKE
PGPGDRSPVEPEPPLGPPRPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPV
QREQGPGSFQDAVQTACDLGSENTGAGSHPQQSLGGTNCPEEKTDEVVTEGSWRRTSATE
EERLEAQRVPRRRCGPGRRSRPRPLSDYGQPVSLSLSIPEDAIAVDPQKEDTEDGDHQPS
GAPIDPADQTAAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQV
PPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAESSALADDNGSEEDYSY
EDLCRANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEAS
HKDWWWGRSADREAWFPASFVRLRVNQEELAEGSSGTTGEEPAEDAGRGRHKHPESKQQM
RTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFL
KDLEKQYNQEEPHLSEIGSCFLEHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEA
CRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYRNIKAAYEAMKNVACL
INERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFD
HQLVACKKDLLRRDVLYYRGSTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHL
FCAKKPEDKARWLQACRDERRRVQEDRAMGVEISESQKKLAMLNAQKAGHGKSKGYGGGC
PSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaaaggcagtgaccacgaccgcggagcccgatgtgcacggcaggcgggaaggc
caggccggcggcctctgggaggaaggcgtgcgcgaggagccgggggacacggaggcgcgc
gtgggtctgaaccgcgctgccctgtgcccgcgggctcccggaccccagaccatgaccacg
gcccagaacggccacgggcgcggagctgcggtccccggtcccatctctgatcccaaagac
cccggcatggtgacctacccggcgtgtcgacgggaggcgcggctcagcccggcccgcctc
ctgcgcctcttctccgccggcgcgaacaggacgcgcgcggaccccgagcggccccggccc
gccggcctcgtgggcagctcctccacgtggaacgccctggcctccttccggaaaatgggg
tctttcaaaaaactgaagacctcggtcctccagggaattcagaatcgggagggatgggac
gccgccaaagagggggccgaggaacgcgacctgggcaaggcggtccccaacggcgtggcg
gccggagcgcccgcgggcaggtgccccccggggccgggcttcgcgtccgacggctcggac
cccgaggaccccgacgacggcttcgcacgcggcgctccccggtcccgcagcatccgccgc
gcctacggcctggggcgcattcgcctcctggacccggagccgcccgccccggagcccgcg
gcgtgcgaggccccggcgcgggagcccgagaggaacggcgtctgcaggcggagcaagagt
acggacagcctgaccttccttaagaagagctccttccggaggaagtcggcctcgcacctg
gccgagctgcggcgcgcgcccgagagcggggccccgcggaggacgctgagcggctcgtcc
gcggactccgacagctccggcggggcccccgcgaggcccaggcgctgcaggagcccgctg
cgggccccggacctggcccgggtgctgcggctcgtgggtgacggcgcggccggccggccg
ggggaccccgggggcgccccgcccgggccgcggccgcacagccggctgcacgacgactac
tcccgccgcgcggtcgccggccccgagcgcgggcgaaggggcgaggagccccaggacccc
gggctggcgggtgctgggggctcggccagtgacgcggctgccggaggtgccgttcctcgc
gcccccggctcttcctccaggcccccggtccgggaggtgtcggacaggggctccaaggaa
ccgggccctggcgaccggtctcccgtggagcccgagcctcctctcggtcctccgaggccc
accacgcccaagccccccagccctcggagccccgacgcagcgcctgccaagtgtcccaac
agcgtcagcgcgctgtccctgagttcagtggacagcgaggaaagggcagaggggcccgtc
cagagggagcaaggccccgggtccttccaggatgcggtgcaaaccgcctgtgacctgggc
agtgagaacaccggcgccggcagccacccgcagcagagcctcggggggacgaactgtcca
gaagaaaagacggacgaggttgtgaccgaggggtcctggaggcggacctccgcaacagag
gaagagaggctggaggctcagagggtccccaggaggagatgcggacccgggaggaggtca
aggccccgaccactctctgactacggccagccggtcagcctaagtctgtccatccctgaa
gacgcgatcgccgtagacccccagaaagaggacacagaggacggtgaccaccagcccagc
ggggcccccatcgaccctgcagaccagaccgctgctgggggctgcccccggggggcgccg
agaagacgccccatctccgtgatcggcggggtcggcttctatgggagcagccaggcggag
gagggggaggccattctgccccaaccagctgcccggccgcccgtgcccgcgcaccaggtg
ccgccctaccgcgcggtgtcggcccggctgcggccgtgcgccttctcccagagcaccccc
atcgggctggaccgcgtgggacgccggcggctcatgagagcatccaacatttcttctgat
ggcggtgcggagtcatctgccctagcggatgacaatggcagcgaggaggactacagctat
gaagacctctgtcgggccaacccccggtacctgcagccgggcggggagcagctggccatc
aacgagctgatcagcgatggcagcgtggtctgcgccgaggccctgtgggaccacgtgacg
atggacgagcaggagctgggcttcaaggccggggacgtcatccaggtcctggaagcctcc
cacaaggactggtggtggggccgcagcgcggacagggaggcctggttccccgccagcttc
gtccgactgcgggtcaaccaggaggagctggcggagggctccagcggcaccacgggcgag
gagccggcggaggacgcgggccggggccgccacaagcaccccgagagcaagcagcagatg
cggaccaacgtcatccaggagatcatggacaccgagcgggtgtacatcaagcacctccgg
gacatctgcgagggctacattcgacagtgtcgcaagcacacggcgatgttcacggtcgca
cagctcgccaccatttttggaaacattgaagatatttacaaattccaaagaaagttcctg
aaagaccttgagaaacagtacaatcaagaggaacctcacctgagtgaaatagggtcctgc
tttcttgaacatcaagaaggcttcgccatctactccgagtactgcaacaaccacccgggc
gcctgcgccgagctggcgggcctgatgaagcagggccgctaccgacacttcttcgaggcc
tgccgcctgctgcagcagatgatcgacatcgccattgacggcttcctgctgacgcccgtg
cagaagatctgcaagtacccgctgcagctggccgagctgctcaagtacaccactcaggag
cacagcgattacaggaacataaaggcagcgtacgaggccatgaagaacgtcgcctgtttg
atcaatgagcgaaaacgcaagctggaaagcatagacaagatagcacggtggcaggtgtcc
atcgtgggctgggagggccaggacatcctcgagcgcagctcggagctgatccactccggg
gagctgaccagggtcacccggcagggcaagagccagcagcggacgttcttcctgtttgac
caccagctggtggcctgcaagaaagacctgctgcggagggacgtgctctactaccgcggc
agcacagacatggacgccgtggaactcgtggacctggaggacggccgcgacggtgcccgc
accctcggcgtcagaaatgccttcaagctggtcagcaggacgggtgacgaggcgcacctg
ttctgtgccaagaagcctgaggacaaggcgcggtggctgcaggcctgcagggacgagcgc
aggcgggtgcaggaggaccgggcaatgggagtggaaatttcagaaagtcagaagaaactt
gccatgttaaatgctcaaaaggcaggacatggaaagtcaaaaggctacggtggaggatgc
ccctcggcccccccgctccagagcctgcggccggtccaccagcgccacgtcaccgtgccc
gccagcctgccacaacagcaggtgttcgccctggcggagcccaagaggaagccgtcgctg
ttctggcacaccttcaacaagctcacccccttcaggaagtga
DBGET
integrated database retrieval system
