Orcinus orca (killer whale): 101290056
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Entry
101290056 CDS
T05247
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor04714
Thermogenesis
oor05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101290056 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101290056 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101290056 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101290056 (SMARCD2)
03036 Chromosome and associated proteins [BR:
oor03036
]
101290056 (SMARCD2)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101290056 (SMARCD2)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101290056 (SMARCD2)
PBAF complex
101290056 (SMARCD2)
GBAF(ncBAF) complex
101290056 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101290056
NCBI-ProteinID:
XP_004275688
LinkDB
All DBs
Position
19:36089834..36099931
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQFQRPGMSPGSRMPMAGLQVGPPAGSPFGSAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGNPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcc
gttgccgcggccctgggagctccgcctccgccagcaggacccggcatgctgcccggaccg
gcgctcagggggcccgggccggctggaggcgtggggggccctggggccgccgccttccgc
cccatgggccccgcgggccctgcggcgcagttccagaggcctggcatgtcaccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgccggctccccatttggctcagct
gctccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctactt
gtgccccaggctcagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgtcccagagtctcaggcgtacatg
gatctcttggcttttgagcggaagctggaccagaccattgctcgaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttctaat
acgttcagtcccagcaaggcagaaggtgatagcgcaggaaccgcagggacccctggggga
aaccccgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggat
gatcctagtaaacagaagaggaagttttcttcattcttcaagagcctcgtcattgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtgaaacggcccggagacctcaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcctccccagtacaagttggacccccgactggcgaggctg
ctgggggtgcacacacagacgagggctgccatcatgcaggccctgtggctctacatcaaa
cacaaccagctgcaggacggccacgagcgggagtacatcaactgcaaccggtacttccgc
cagatcttcagttgtggccgactccgtttctctgagattcccatgaagctagccgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagcgtggaccctaacgaccag
aagaagacagcctgttacgacattgatgtggaggtggatgacccgcttaaggcccagatg
agcaattttctggcctccaccaccaatcagcaggagatcgcctctcttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacccagagggatttcatgctcagtttt
agcactgacccccaggacttcatccaggaatggctccgttcccagcgccgggacctcaag
atcatcactgatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaatccgcctgacctaa
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