Orcinus orca (killer whale): 101290214
Help
Entry
101290214 CDS
T05247
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4 isoform X1
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101290214 (SOX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101290214 (SOX4)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101290214 (SOX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101290214
NCBI-ProteinID:
XP_049572322
LinkDB
All DBs
Position
10:complement(88942506..88947681)
Genome browser
AA seq
485 aa
AA seq
DB search
MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANSGSSAASSSKLGEKGDKVGGSGGGGHGGGGGGGNGNAGGG
GGGASGGGANSKPAQKKSCGSKVAGGAGGGVGKPHAKLILAGGGGGGGKAAAASSSSFAA
EQAGAAALLPLGAAAAAAADHHSLYKTRTPGASASAAASASAGLAAPGKHLTEKKVKRVY
LFGGLGASSSPVGGVGAGADPSDPLGLYEEGGAGCSPDGPSLSGRSSAASSPAAGRSPAD
HRSYASLRAASPAPSSAPSHASSSASSHHSSSSSSSSSSGSSSSDDEFEDDLLDLNPSSN
FESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPETPPPAPHRFQRASGLVCTPG
QKPSW
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaccaacaacgccgagaacacggaagcgctgctggccggcgagagctcg
gactcgggcgccggcctcgagctgggcatcgcctcctcccccactcccggctccaccgct
tccacgggcggcaaggccgacgacccgagctggtgcaagacgccgagcgggcacatcaaa
aggcccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagattatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgttggaaactgctc
aaagacagcgacaagatccctttcattcgggaggcggagcggctgcgtctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
tccggctcctcggccgcctcctcctccaagctgggggagaagggcgacaaggtcggtggc
agcggcgggggcggccacgggggcggcggcgggggcgggaacggcaacgcggggggagga
ggcggcggcgcgagcggcggcggcgccaactccaaacccgcgcagaaaaagagctgcggc
tccaaagtggcgggcggcgcgggcggcggggtcggcaagccccacgccaagctcatcctg
gcgggcggcggcgggggcggcgggaaagcggcggccgcctcctcctcctctttcgcggcc
gagcaggctggggccgccgccctgttgcccctaggcgccgccgccgccgcggctgccgac
caccactcgctgtacaagacgcggactcccggcgcctcggcctcggcggcggcctcggcc
tccgccggcctcgcggccccgggcaagcacctgaccgagaaaaaggtgaagcgcgtctac
ctgttcggcggcctgggcgcgtcgtcctcgcccgtcggcggcgtgggcgcgggcgctgac
cccagcgaccccctcggcctatacgaggaggggggcgccggctgctcgcccgacgggccg
agcttgagcggccgcagcagcgccgcttcgtcgccggccgccggccgctcgcccgccgac
caccgtagctacgccagcctgcgcgccgcctcgcccgccccgtccagcgcgccctcgcac
gcgtcctcgtcggcctcgtcccatcactcctcctcctcctcgtcctcctcctcctcgggc
tcgtcgtcctcggacgacgagttcgaagacgatctgctcgacctgaaccccagctcaaac
tttgagagcatgtccctgggcagcttcagctcgtcgtcggcgctggaccgggacctggat
tttaacttcgagcctggctccggctcgcacttcgagttcccggactactgcacgcccgag
acccccccccccgccccgcaccgcttccaacgagcttccggacttgtctgcacccccggc
cagaagccgagttggtag
DBGET
integrated database retrieval system
