Orcinus orca (killer whale): 125961524
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Entry
125961524 CDS
T05247
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
125961524 (SOX18)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125961524 (SOX18)
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
MlaC
Motif
Other DBs
NCBI-GeneID:
125961524
NCBI-ProteinID:
XP_049555784
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Position
16:1039999..1041884
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AA seq
386 aa
AA seq
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MQRSPPGYGAQDDPPARRDCAWAPGPGAAAEPRGLPTAPAAPAAPAAPASPPSPPRSPPR
SPEPGRYGLSPAGRGERQAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLG
KAWKELSPAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPP
PPPEPFPAATGPARAFRELPPLGADFDGLGLPTPERSPLDGLEAGEAAFFPPPAAPEDCA
LRAFRAPYGPAELPRDPGGCFGAPSAEALRTAPAPAAPLCGLYYGAPGVPGPGPYPGPLS
PPPEAPPLEGAEPLGPAADLWADVDLTEFDQYLNCGRTRPDAAGLPYHVALAKLGPRAMS
CPEESSLIAALSDASSAVYYSACISG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgcccggctacggcgcacaggacgacccgcccgcccgccgcgactgt
gcatgggccccgggccccggggccgccgctgagccgcgtggcctccccaccgcccccgcc
gcgcccgccgcgcccgccgcgccagcctcgccgcccagcccgccacgcagcccgccgcgc
agccccgagccggggcgctatggcctcagcccggccggccgcggggagcgccaggcggcc
gacgagtcgcgcatccggcggcccatgaatgccttcatggtgtgggcgaaggacgagcgc
aagcggctggcgcagcagaacccagacctgcacaacgcggtgctcagcaagatgctgggc
aaggcgtggaaggagctgagcccggcggagaagcggccctttgtggaggaggcggagcgc
ctacgcgtgcagcacctgcgcgaccaccccaactacaagtaccggccgcgccgcaagaag
caggcgcgcaaggcccggcgtctggagcccggcctcctgctcccaggcttggcgccgccg
ccgccgcccgagccctttcccgcggccaccggcccggcccgggccttccgcgagctgccg
ccgctgggcgccgatttcgacggcctggggctgcccacgcccgagcgctcgccgctggac
ggcctggaggcaggcgaggccgccttcttccctccgcccgcggcgcccgaggactgtgcg
ctgcgggccttccgtgcgccctacggccccgccgagctgccccgggacccgggcggctgc
ttcggggcgccctcggccgaggcgctcaggaccgcgcccgcccccgccgcgccgctctgc
ggcctctattacggcgccccgggtgtgcccggcccaggcccctatcccggcccgctgtcg
ccgccgcccgaggccccgccgctggagggcgccgagccgttggggcccgccgccgacctg
tgggccgacgtggacctgaccgagttcgaccagtacctcaactgcggccggactcgcccc
gacgccgccgggctcccgtaccacgtggcactggccaagctgggcccgcgcgccatgtcc
tgcccggaggagagcagcctgatcgccgcgctgtccgacgccagctctgctgtctactac
agcgcctgcatctcaggctag
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