Ochotona princeps (American pika): 101517661 Help Entry 101517661         CDS       T07609                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism opi  Ochotona princeps (American pika) Pathway opi04392   Hippo signaling pathway - multiple species Brite KEGG Orthology (KO) [BR:opi00001]  09130 Environmental Information Processing   09132 Signal transduction    04392 Hippo signaling pathway - multiple species     101517661 (DCHS1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:opi04515]     101517661 (DCHS1) Cell adhesion molecules [BR:opi04515]  Cadherins   Cadherin related    101517661 (DCHS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 Cadherin_pro Cadherin_4 Motif Other DBs NCBI-GeneID:  101517661 NCBI-ProteinID:  XP_004590060 LinkDB All DBs Position 1:complement(62009479..62030315) Genome browser AA seq 3295 aa AA seqDB search MQKEPGIALSCPGMKSPRPLFLLSSLLLLLGAWVTGAQGQAGSLDLQIDEEQPAGTLIGD ISAGLPAGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVTPD GATVEVTVRVADINDHAPAFPQARATLQIPEHTAFGTRYPLEPARDADAGHLGTQGYALS GDGAGETFRLETRPGPDGAPVPELVITGELDRENHSHYMLQLEAYDGGSPPRRAQALLDV TLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAITYEINRRQSEGDG PFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMT VIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSIIYL VCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPVFDHQLYRPEPLP EVALPGSFVVRVTAQDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQ PQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQKTFYNASLPEGTQPGTCFLQVTAT DADSGPFGHLSYSLGAGLGASGSPPFRIDARSGNVCTIRTLDRDQGPSSFDFTVTAVDGG GLKSMVYVKVFVSDENDNPPHFYPREYAASLSAQSTPGTAVMRVRAHDPDQGPHGRLSYH ILAGNSPPLFALDEQTGLLTVAWSLARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPG TPTPPIFEKLQYVFSVAEDVAPGTSVGVIQAHNPPGRLGPVTLALSGGDPKGLFSLDAAS GLLQTFRPLDRELLGPVLELEVRAGSGIPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLL PPNTAPGTPIYTLRALDPDSGVNSRVTFTLLAGGSGVFTVDPTTGHVRLLGPLGPPGGPA HELELEARDGGSPPRTSHFRLRVVVQDLGTHGLAPRFDSPIYRIDLPSGTTPGTQVLQVQ AQAPDGGPITYHLATDGASSPFGLEPQSGWLWVRAALDREAQELYTLKVIAVSASRAELG QQTGTATVKVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRIFATDRDLGPNGRLTYS LRQLSEDSKAFRIQPQTGEVTTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHIAVLD LNDNSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSEL FSLHPHSGELLTAASLSRAERPHYVLTLSAHDQGSPPRSASLQLLVQVLPSTRQAEPPPD LTEPDPGAPVPVVLTVTAAEGLKPGSLLGSVAPPEPAGVGALTYTLVGGADPEGTFALDA VSGRLYLARPLDFEAGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPTFARDPLAL ALPENPEPGVALYTFRASDADGPGPNSDVRYRLLRQEPPTPPLRLDARTGALSAPRGLDR ETTPALLLLVEATDRPANASRRRTARVSARVFVTDENDNAPVFASPSRVRLPEDQKPGPA ALHVVARDPDLGEAARVSYRLAAGGDGHFRLHPNTGALSVVRPLDREQRAEHILTVVASD HGSPPRSATQLLTISVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQ VTYGGVSCESFSLDPDTGVLTTLRALDREEQEEINLTVYARDMGSPPLLTHVTVRVTVED ENDHTPTFGTSHLSLEVPEGQDPQTLTVFRASDPDVGANGQLQYRILDGDPLEAFVLDLA SGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYNVE VPEDAPAGTLLLQLQAHDADSGANGRVTYYLGAGAAGAFLLEPSSGELRTATNLDREQCP SYAFSVTAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSPRTPTLPL ATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRMARSPGALSPRDRVLFIVATDL GRPARSATGVVIVGLQGESERGPRFPRASNEATLRENAPPGTPVASPKAVHAGGSNGPIT YSILSGNEKGTFSIQPGTGAITVRSAEGLDFEASPRLRLVLQAESGGIFAFSVLTLTLQD ANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQPARGLFQVD PATGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWEL RVSEDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSVGRYGGRISLMGPLDFEQRD RYHLQLLAHDGPHEGHANLTVLVEDVNDNSPTFSQSLYQVTLLEHTPPGSAILSVSATDR DSGANGHISYHLASPAEGFSVDPNNGTLFTTVGAVSLGYEGPGVVDVVLEARDHGAPGRA ARATVHVQLQDQNDHSPSFTLPHYRVAVTEDLPPGSTLLTLEATDADGSRTHATVDYSII SGNRGQVFQLEPRLAEAGEGGGPGPRVLGCLVLLEPLDFESLTQYNLTVAAADRGQPPRS SAVPVTVTILDVNDNPPVFTRASYRVAIPEDTAVGAELLHVEASDADPGPHGLVRFTLSS GDPAGLFELDESSGTLRLAHPLDCETQTRHQLVVQAADPAGAHFALAPVTVEVQDVNDHG PAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGVFGKLHYSLLEAGPGPEGRDVFALNSS TGELRARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVP EGARRGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSRAPGSGTAT SGGGGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAA SLGVVVVLALAALVLGLVRARSRKAEAAPGPMSQAAPLASGSLQKLGREPPSPPPSEHLY HQTLPSYGGPGTGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAAR GPDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGPPATATAFLGGC GLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEI ARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAIFPPASHRSPISHEG SLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSTSALSAESGLEPPDDTELHI NT seq 9888 nt NT seq  +upstreamnt  +downstreamnt atgcagaaggaaccaggcattgcactttcctgccctggcatgaagagccccaggcccctc tttctgctctcatcgctgctgctgctactaggggcctgggtgacaggtgcccagggtcag gcaggaagcctagacctgcagattgatgaggaacagccagcgggcacactgatcggggat atcagtgcaggccttccggcaggcacagcagcacctcccatgtatttcatctctgcccag gagggcagtggtgtgggcacagacctagccatcgatgaacacagtggggtcgtccggaca gcccgtgtcttggaccgcgagcggcgggaccgctaccgcttcactgcagtcactcctgac ggtgccaccgtggaagttacagtgcgtgtggctgacatcaacgaccatgctccagccttc ccacaagctcgggccactctccagatacctgagcatacagcttttggcacccgctatccg ctggagcctgctcgtgatgcagatgctggccacttgggaacccaaggctatgcactgtcc ggtgatggagctggtgagaccttccggctagagacgcgccctgggccagatggggctcct gtgcctgagcttgtaattactggggagctagaccgagagaaccactcccactacatgctg cagctagaggcctatgatggtggttcaccaccccggagagcccaggccctgctggacgtg accctgctggacatcaatgaccatgccccagctttcaatcagagccgctaccatgccgtg gtgtctgagagcctggccccaggcagtcccgtcttgcaagtatatgcatctgatgctgac gctggtgccaacggggctatcacttatgaaatcaaccggagacagagtgagggtgacggg cccttctccattgatgcccacacggggctgttgcggttggagcgccccctggactttgag caacggcgggtccatgaactggtggtgcaggcacgggatggtggggctcaccccgagctg ggctcagcctttgtgactgtgcacgtgcgagatgccaatgacaatcagccctccatgact gtcatcttcctaagtgcagacggctccccacgagtgtctgaggctgccccacctgggcag ctggtggctcggatatccgtatctgacccagatgatggtgactttgcccatgtcaacgtg tccctggagggtggagagggccactttgccctaagcacccaagacagcatcatctatctg gtgtgtgtggctcgacggctggaccgggaagaaagggatgcctataacttgcgggttact gccacagactcaggctcccctccactgcgggctgaggctgcctttgtgctgcatgtcacc gatgtcaatgacaacgctcctgtctttgatcaccagctctaccggcccgagcctctgcct gaagttgcactgcctggcagctttgtggtgcgggtgacagcacaggaccctgaccaaggc accaacggtcaagtcacctacagcctggcccctggcgctcatacccgctggttctccatc gaccccacctcaggcatcatcaccacggctgcctcactggactatgagttggaacctcag ccacagctgattgtggtagccacggatgggggcctgccccctctggcctcctctgccaca gttagcgtggccctgcaagatgtgaatgataatgagccccagttccagaagacgttctac aatgcctcactgcctgagggaacccagcctggaacctgcttcctgcaggtgacagccacg gatgcagacagtggccctttcggccacctctcctattccttgggtgctggactgggagcc tctgggtctcccccatttcgcattgatgcccgcagtgggaatgtgtgcacgatccggacc ctggaccgagaccagggaccctcgagctttgacttcactgtgactgctgtggatggggga ggcctcaagtccatggtgtatgtgaaggtgtttgtgtcagacgaaaatgacaacccacct cacttttatccacgggagtatgctgccagtctgagtgcccagagtacaccaggcacagct gtgatgagagtccgtgctcatgaccctgaccagggtccccatgggagactctcctatcac attctggctggcaacagccctccactttttgccttggatgaacaaacagggctgttgaca gtagcatggtccttggccaggcgagcgaattctgtggtgcagctggagattggagctcag gatggaggtggcctgcaggcagaacccagcgcccgagtcaacatcagcatcgtacctgga acccccacaccacccatatttgaaaaactacagtatgttttttctgtggcagaggatgtg gcacctggcaccagcgtgggcgtaatccaggcacacaacccaccaggtcgcctggggcct gtgacccttgcactatcgggaggggatcccaaggggctcttctccctggatgcagcctca gggctactgcaaacttttcgccctctggaccgagagcttcttggaccagtgctggagctg gaggtgcgagctggcagtggaatacctccagctttcgctgtagctcgggtgcgtgtgctg ctggatgatgtgaatgacaattcgcctgccttccctgcacctgaagacactgtcctgctg ccaccaaacactgcccctgggactcctatctatacactacgggctctggaccctgactcg ggggtaaacagtcgagtcaccttcaccctgcttgctggaggcagtggggtcttcactgtg gaccccaccactggccatgttcggctcctgggacctctgggacccccaggagggccagcc catgaattggaactggaggcccgggatgggggctctccaccacgcaccagccactttcga ctgcgggtggtggtacaggacctggggacccatgggctggctccccggttcgacagcccc atctatcgtatcgacctgccctcgggcaccacccctgggactcaagtcttacaggtgcag gcccaggcaccagatgggggccctataacctatcatcttgcaacagatggagcgagtagc ccctttggtctagagccacaaagcgggtggctatgggtgcgggcagcgctggaccgtgaa gctcaggagttgtacacactgaaagtcatagccgtgtcggcatccagagctgaactgggg cagcagacaggcacagctactgtgaaggtcagcatcctcaaccagaatgaccacagtccc cgcttgtctgaggagcccaccttcttggctgtagctgaaaaccagcccccaggaacaagt gtgggccggatctttgccactgacagagacttgggacccaacggacgtctgacctacagc ctgcgtcagctgtcggaagacagcaaggccttccgtatccagccccagacaggtgaggtg accacactccaaaccctggaccgcgagcagcagagcagctaccagctcctggtgcaggtg caggatggaggaagtccaccccgcagcactacaggcaccgtgcacattgcagtgctggac ctcaatgacaacagccccaccttcctacaggcttcaggagctgctggcgggggtctccct atacaggtaccagatcgcgtgcctccaggaacactggtgacaactctgcaagccaaagat ccggatgagggggagaacggaaccatcctgtacacactcactggtcctggctcagaactc ttctctctgcacccccactccggggaactgctcactgctgcatccctgagccgagcagag cggccccactatgtgctgacactgagtgctcatgaccaaggcagcccacctcgaagtgcc agcctccagttgctcgtgcaggtgcttccctcaacccgccaggctgaaccgccaccagat cttaccgagccagaccctggggcaccagtgcctgtggtgctaacagtgacggcagccgag gggctgaagccaggctccctgctgggctctgtggcgcccccagagccggcgggtgtgggc gcactaacctacacactggtgggaggcgccgaccccgagggcaccttcgctctggacgcg gtctcaggacgcctgtacctggcgcggcccttggatttcgaggcgggcccggcgtggcgc gcgctcacggtgcgcgccgaggggcccggcggcgcaggcgcgcggctgctgcgagtgcaa gtgcgcgtgcaggatgagaatgagcacgcacccacctttgcgcgcgacccgctggcgcta gcgctaccagagaaccccgagcctggggtggcgctgtacactttccgcgcgtcggacgcc gatggccctggccccaacagcgacgtgcgttaccgcctgctgcgccaggagccacctacg cccccgctccgcctggacgcgcgtactggggctctcagcgctccccggggcctggaccgg gagaccacacccgcgctgctcctgctcgtggaagccaccgatcggcccgccaacgctagc cgtcgccgcacagcacgcgtttctgcgcgggtctttgtcacagatgagaatgacaacgca ccagttttcgcgtcgccctctcgcgtgcgcctcccggaagatcagaaacctgggcccgcg gctctgcacgtggtggcccgggacccagatttgggcgaggccgcacgggtgtcctatcgc ctggcagctggcggggatggccactttcggctgcacccgaacactggagcgttgtccgtg gtgcgacccctggaccgcgagcagcgagctgagcacatcctgaccgtggtggcctcagac cacggctcgccaccgcgctctgccacacaactcctgaccatcagtgttgccgatgtcaac gatgaggcacccgctttccagcagcaggagtacagcgtcctcttgcgggagaacagccct cctggcacttctcttctcactctgcgagccaccgaccccgacctcggcgccaatgggcaa gtcacttatggaggagtgtcctgtgaaagcttctctttggacccagacactggagttctc acaactcttcgggctctagatagggaggagcaagaggagatcaacctgacagtatatgcc cgggacatgggctcgccaccgctgttaactcatgtcactgtacgagtgactgtggaagat gagaatgaccacacaccaacctttgggacttcccacctttccctggaggtgcctgagggt caggacccccagacccttactgtgttccgggcctctgacccagatgtgggcgccaacgga cagctgcagtaccgcatcctggatggagacccgttggaagcctttgtcctggatcttgct tctggggagtttggcaccatgaggccactagatcgggaagtagagccagcattccagctg cggatagaggctcgggatggaggccagccagctcttagtgccactctacttgtgacagtc acagtactggatgccaacgaccatgcccctgcctttcctgtgcctgcctacaatgtagag gtgcccgaggatgcacctgcaggaaccctgctgctgcagttacaggctcatgacgctgat tccggggccaacggccgtgtgacctactacctgggtgcaggtgcagcaggagccttcctg ctggagcccagctctggggaattgcgcactgcgacaaacctggacagagaacagtgcccc agctacgccttctctgtgaccgctgtggatggtgcagcagctgggcccctgagcaccaca gtgcctgtcacgatcacagtgcgcgatgttaatgaccatgcacccacctttcccaccagc cctctgcgcctgcgtctgccccgcccagggcccagccctaggaccccaaccttacctctg gccacactacgagctgaagatcgtgacgctggtgctaacgcctccattttgtaccgactg gcaggcacaccacctcctggcaccactgtggactcatacactggtgaaattcgtatggcc cgctctcctggagccctgagccctcgggatcgtgtcctcttcattgtggccactgatctt ggccgtccagctcgctctgccactggtgtggtcattgttggactgcagggggaatctgaa cgtggaccccgatttccccgggctagtaatgaggctacacttcgtgagaatgcgccccca ggaactcctgttgcatcccccaaggctgtccatgcaggaggctcaaatggaccgatcacc tacagcattctcagtggaaacgaaaagggcacgttctctatccagcctggtacaggagcc atcacagttcgatcagcagaggggctggactttgaggccagcccacggctgcgactggtg ctgcaggccgagagcggcgggatctttgccttctctgtgctgaccctgaccctgcaagat gccaacgacaacgctccccgtttcttgcagcctcactatgtggccttcttgcctgagtct cggcccttagaagggcctctgctgcaggtggaggcagatgacctggatcaaggctctgga ggacagatatcctacagtctggctgcatcccagccagcacgaggactattccaggtcgac ccagccacaggcactatcactaccacagccatcctagaccgtgagatctgggccgaaaca cggctggtactgatggccacagacagaggaagcccagccctggtgggctcagctaccctg acagtgatggtcatcgacaccaatgacaaccgccccaccatccctcagccctgggagctt cgggtgtcagaagatgcactattgggctcagagattgcccaagtaacagggaatgatgtg gactctgggccagtgctgtggtatgtgctgagcccctctgggccccaggatcctttcagt gttggccgctatggaggccgcatctccctcatgggccccttggactttgagcagcgtgac cgctaccacctgcagctgctggcacacgatgggcctcatgagggccatgctaacctcaca gtgcttgtggaagacgtcaatgacaacagccccaccttctctcagagcctttaccaggtg acgctgctcgaacacacccctccgggcagtgccattctctccgtctctgccactgaccgg gactccggtgctaatggtcacatctcctaccacctggcttcccccgctgagggcttcagt gttgacccgaacaatggaaccttattcacaacagtgggagctgtgtcactgggttatgag ggaccaggagtggtggatgtggtgctggaagcaagagatcatggggccccaggccgggca gcccgagccacggtgcatgtgcaactccaggaccagaatgaccactcccccagcttcaca ttgccacactaccgggtagctgtgactgaagatctgcctccaggctccaccctcctcacc ctggaggccacagatgccgatggaagccgtacccacgctactgttgactacagcatcatc agtggcaaccggggccaagtcttccagctggaaccccgcctggctgaggctggggagggt ggcggaccaggccccagagtattgggctgcctggtgctgcttgagcctctagactttgaa agcctaacacagtacaatctaactgtagctgcagctgaccgagggcagccaccccgcagc tcggccgtgccagtcactgtcactatactagatgtcaatgacaacccacctgtctttacc cgagcatcctatcgtgtggcaatacccgaggacactgctgttggagctgagctgctgcac gtagaggcctccgatgccgaccctggccctcacgggctcgtgcggttcaccctcagctca ggagaccctgcggggctctttgagctagatgagagctcgggcaccttgagactggcccac cccctggactgtgagacccagactcgacatcagcttgtggttcaggctgccgaccctgct ggggcacactttgctttggcacccgtgacagtcgaagtccaggatgtgaatgaccatggg ccagcctttccactcagtttgttgagcaccagcctggctgagaaccagcccccaggcact cttgttaccactctacatgcaattgatggggatgccggggtgtttggcaagctccactat agcttgctggaggctgggccagggcctgagggccgagacgtgtttgccctaaatagctca acaggggagctgcgggcacgagtgccctttgattacgagcacacaggaagcttccggctg ttggtgggtgctgctgatgctggcaatctttcagcctctgtcactgtgtcagtgctggtg actggagaggatgaatatgaccctgtattcctcgctccagctttccacttccaagtgcca gaaggtgcccggcgtggccacagcttgggtcatgtgcaggccacggacgaggatggaggt gctgatggcctggtgctatattcccttgccacctcttccccttattttggtatcaaccag actacaggtgctctgtacttgcgagtggacagtcgggctccaggcagcggcacagccacc tcagggggtggaggccggacacgccgtgaggcaccacgggagctgagactagaggtggta gcccggggaccgctgcctggctcccggagtgccacagtgcctgtgactgtggatatcacc cataccgcattgggcctggcgcctgacctcaacctgctcttggtgggggctgtggcagcc tccttgggagttgtggtggtgcttgcactggctgctctggtcttggggcttgttagggcc cgtagccgcaaggctgaggcggccccaggtcccatgtcacaggcagcaccgctagccagt ggctccctgcagaagctgggccgggagccacccagtccaccaccctctgagcatctctat caccagactctccccagctatggtgggccaggaactggaggaccctatccccgaggaggc tccctggacccttcacactcaagtggccgaggctcagcagaggctgcagaggatgatgag atccgcatgatcaatgagttcccccgtgtggccagtgtggcctcctccctggctgcccgt ggccctgactcaggcatccaacaggatgcagatggactaagtgacacatcctgcgaacca cctgcccccgacacctggtataagggccggaaggcagggctgctgctgccaggtgcagga gccacactgtaccgtgaggaaggccccccagccactgccacggccttcctgggaggctgt ggcctaagccctgcacccactggggactatggctttccagcagatggcaagccatgtgtg gcaggtgcattgacagccatcgtggctggtgaggaggagctccgtggcagctataactgg gactacctgctaagctggtgccctcagttccagccgctggccagtgtcttcacagaaatc gctcgactcaaggatgaagctcgaccatgtcccccagccccccgtattgacccaccaccc ctcatcactgccgtggcccaccctggagccaagtctgtgccccccaaaccagcgagcacg gctgcaacccgggccatcttcccaccggcctctcatcgctcgcccatcagccacgaaggc tccctgtcctcagctgccatgtctcccagcttctcaccttcgctgtctcctctggctgct cgctcacctgttgtctcaccatttggagtggcccagggcccctccacctcagcactcagt gcagagtctggcctggagccgcctgatgacacagagctgcacatctag

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