Ochotona princeps (American pika): 101521948
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Entry
101521948 CDS
T07609
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101521948 (IRX5)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
101521948 (IRX5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
LEA_6
Motif
Other DBs
NCBI-GeneID:
101521948
NCBI-ProteinID:
XP_004583911
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Position
5:26782922..26786834
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AA seq
489 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKAEDKGDPEGPEAGGAEPKAASGCERLQGPPTPAG
KETEGSLSDSDFKELPSEGRHDTLPVPPRVGGPSPAGPTAARLAEDPAAAHYPAGAPAPG
PHPAAGELPPGPGGPSSVIHSPPPPPPPPPPPAVLAKPKLWSLAEIATSSDKVKDGGGGS
EGSPCPPCPGPVGGPALAGSRASPAPTPSRSPSAQCPFPGGTVLSRPLYYTAPFYPGYTN
YGSFGHLHGHPGPGAGATSAPGSHFNGLNQTVLNRADTLAKDPKMLRSPSQLDLCKDSPY
ELKKGMSDI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
ccggcgtacagcaccagcgtcatctcggggccccgcacggatgagctcggccgctcgtcc
tcgggctccgcgttctcgccctacgctggctccactgccttcacggcgccctcgccgggc
tacaactcgcacctccagtacggcgccgaccccgcggccgccgccgctgccgccttctcc
tcgtacgtgggctctccctacgaccacacgcccggcatggccggctccctgggctatcac
ccatatgcagcgcccctgggctcctacccatacggggatcccgcataccggaagaacgcc
acgcgggacgccaccgccacgctcaaggcctggctcaacgagcaccgcaagaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtg
tccacctggttcgccaacgcgcgccggcgcctcaagaaggagaacaagatgacgtggacg
ccgcggaaccgcagtgaggacgaggaggaggaggagaacattgacctcgagaagaacgac
gaggacgagccccagaaggccgaggacaagggcgaccctgagggtcccgaagcaggagga
gcggagccaaaggcggcttcgggctgcgagcggctgcaggggccgcccacccccgccggc
aaggagaccgagggcagcctcagcgactcggattttaaggagctgccctctgagggccgc
cacgacaccctacccgtgccaccccgcgtcggtgggccctctccagccggtcccacggcg
gcgcggctggcggaggaccccgcggctgcacactaccccgcgggcgcgccggcgcccggc
ccgcatccagctgcgggagagctgcccccgggacccggagggccttcctcagtcatccac
tcgccgccgccaccaccgccaccgccaccgccgcctgcggtactcgccaagcccaaactg
tggtctctggcagagatcgccacatcctcggacaaggtcaaggatgggggcggcgggagc
gagggctccccgtgcccaccgtgccccgggccggtaggcgggccagccctggcgggcagc
cgtgcgtcaccggccccaacaccatcgcgctcgccctcggcgcagtgtcctttcccgggc
ggcacagtgctgtcccggcctctatactacaccgcgcccttctatcccggctacacgaac
tatggctccttcggacaccttcatggccatccagggcccggggcaggcgccaccagcgcc
ccgggctcccattttaatggattaaatcagacggtgttgaaccgagcggacactttggct
aaagacccgaaaatgttgcggagcccgtcgcagctagacctgtgcaaagactccccctat
gaattgaagaaaggtatgtccgacatttaa
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