Ochotona princeps (American pika): 101522144 Help Entry 101522144         CDS       T07609                                  Symbol CROCC Name (RefSeq) rootletin   KO K16469   rootletin Organism opi  Ochotona princeps (American pika) Brite KEGG Orthology (KO) [BR:opi00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:opi03037]     101522144 (CROCC) Cilium and associated proteins [BR:opi03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    101522144 (CROCC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rootletin Crescentin ATG16 DUF4201 Tropomyosin Motif Other DBs NCBI-GeneID:  101522144 NCBI-ProteinID:  XP_004592385 LinkDB All DBs Position 13:complement(11248559..11280278) Genome browser AA seq 1947 aa AA seqDB search MASLLPLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVTERLEQSVRLECGEPETQ EPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQAKILQYKKKCSELEQ QLLEKSTELEQQRLQDAEHRHDLESAVIRLEEEQQRSTSLAQVNAMLREQLEQAGSANKA LSEDIRKVTSDWTRSCKELEQREAAWRREEESFNAYFSSEHSRLLVLWRQVVGVRRLVSE VKMYTERDLLQLGGELARTSRAIQEAGLGLSAGLQLAEGRVEAALEKQALLQAQLEAQLR EKVLREQDLAQLQVQSDLDKADLSARAAELAQAVEQLRSQGLEKDQANKALAEKLEALES LRLQEQAAEAEDGEGLQQTLRDLAQAVLSDTESGVQLSGSERTADASDGSLRGLSGPRTP SPPRRCSPGRGRSPRRGPSPACSDSSTLTLIHSALHKRQLQVQDMRGRYEASQELLGTLR KQLSEGEDERRALEEQLRQLRDQAAGAAQAREDAQREAQRLRSANDLLSREKESLVHSLQ VAQQRAQELGQEMEKLQAAQAELQRQRARLEEEQDDTVQEVARARRELERSHRQLEQLEV KRSGLAKELVEVREALSGATLQRDMLQAEKAEVTQALTKAEAGRVELELTMTKLRAEEAS LRDSLSKLSALNESLAQDKLDLNRLVAQLEEEKAALLGRQRQAEQEATLALGEQGRLEQL RLEQEVERQGLEGSLRAAEQAREALEQQLPTLRRERTQLQEQLAQLSRQLSGREQELEQA RRESQRQVEALERAAREKEALARERASLAVQLSAAEREGRSLLEEATRLRLEKEALESNL FDVQRQLTQLEVRREQLESEGQALLLAKETLTGELAGLRQQMIATEQKVALDKELLAQKL VQAEREAQASLREQQVAHEQDLQRLQREKEAAWRELETERAQLQSQLQREQEELLARLEA EKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKAALSEKLMGVRHSLAAISLDME RHKRDAQSRQEQDRSTVNALTSELHDLRAQLEEAAAAHAQEVKRLQEQARELGKQHESCV REAEELRMQLRLLEDARDGLRRELLEAQRKVRESQEAHEAQRQEVGELRRSLSEGAKERE ALRRSNEELRAAVRKAEGERISLKLANEDKEQKLALLEEARAASGREAGELRAGLQEVER SRLEARRELQELRRQMKALDSENARLARELAELQGRLALGERAEKENRRESLGLRQKLQK GEASLEAVRQELQGAQRKLQEQEGEFRIRERGLMSSLEEARTTEKQQLEHARGLELKLEA ARAAAAELGLRLSAAEGRAQGLEAELARVETQRRAAEAQLGALRSALRRGLGLGRGAGWS PAARPMPVPCSPAREAPAGESEEGFNSSSPLERSPGSQPPSPGPTTSPAPPDLDPEAVRG ALREFVQELRSAQRERDELRTQASALSHQLAEMEAERDSTTSRAQQLQKAVAESEEARRS MDGRLSGAQAQLALREESIRRSERERRAAQDQVAALERSLQATENELRASQEKVSKLKAN EGKLENDKRRLKEVLDACESRAVKLELQRRSLEGELQRSRLGLSDREAQAQVLQDRVDSL QRQVADGEVKARTLQLTVERLNGALAKLEENEGSLHDKVQGLAEALAQSNASLASSQDKN LHLQKALTACEHDRQVLQERLDATRQTLSEVRKQSSSLGELVQTTRAELADLELQRAEAE GQLQQLQEVLRQRQEGEAAALHSVQKLQEERRLLQERLGSLQQALVQLEAEKWEVERTAL RLEKDRGALRRTLDKVEREKLRSHEGTVRLSVEKGRLDRTLTGAELELAEAQTHILQLEA QMVALEQNPSAAQQEAEEQQRRELQQEVERLRSAQVQTERTLEARERAHLQKVRGLEEQV STLKGQLQQELRRNLASFSPPSSPPET NT seq 5844 nt NT seq  +upstreamnt  +downstreamnt atggcgtcactgctgccactgcaggaagagaatcagctgttgcagcaggagctgtcccgc gtggaggatctgctggcccagagccgggccgagcgcgacgagcttgctattaagtacaac gcagtcaccgagaggctggagcagtctgtgcggctggagtgtggggagccagagacgcag gagccccgggggctggtacggcagagcgtggagctgcggaggcagctgcaggaggagcag gcctcctaccggcgcaaactgcaggcctaccaggagggccagcagcggcaggcccagctg gtgcagcggctacaggccaagattctccagtacaaaaagaagtgttcagagctggagcag cagctgctggagaaatctacagagctggagcagcagcggctgcaggatgcagagcaccgc catgatctggagagcgctgtcatccgcctggaggaggaacagcagaggagcaccagcctg gcacaggtgaacgccatgctccgagagcagctggagcaggcaggctcggccaacaaggct ctcagcgaggacatccgcaaagtgaccagcgactggacacgcagctgcaaggagctggag cagcgggaggcggcgtggaggcgcgaggaggagtccttcaacgcctacttcagcagcgag cacagccgcctgctcgtcctctggagacaggtggtgggggtccgccggctggtcagcgag gtgaagatgtacactgagagggacctgctgcagctgggaggggagctggctcggacgtcc cgggccatccaggaggcgggcctgggactgagtgctggcctgcagctggccgaggggcgg gtcgaggctgccctggagaagcaggccctgctgcaggcccagctggaggcccagctgcgg gagaaggtccttcgtgagcaggacctggcccagctgcaggtgcagagcgacctggacaag gctgacctcagtgccagagcggcagagctggcccaggcagtggagcaacttcggagccag ggtctggagaaggatcaggccaacaaggcccttgccgagaaactggaggctttggaatcc ctgcggctacaggagcaggcagcggaggcagaggatggagaggggctgcagcagaccttg cgggatctggcccaggcggtcctgtcagatacagagagtggcgtccagctaagcggctcc gaacgcactgcggacgcttcggatggcagcctgcggggcctctcgggcccacggaccccg tcgccgccacggcgctgctcgcccggccgcggccgttccccgcgtcgcggcccgtcgccg gcctgctccgactcctccacgctcaccctgatccactctgccctgcacaagcgtcagcta caggtccaggacatgcgtgggcgctatgaggcgagccaggagctcctgggcaccctgagg aagcagctgagcgagggcgaggacgagcggcgcgccctggaggagcagctgcggcagctg cgggaccaggccgcaggggccgcccaggcccgggaggacgcgcagcgtgaggcgcagcgg ctgcggagcgccaacgacctcctgagcagggagaaggagagcctggtccacagcctgcag gtggcccagcagcgggcccaggagcttgggcaggagatggagaagctgcaggccgcccag gcagagctgcaacgccagcgggcccggctggaggaggagcaggatgacacggtgcaggag gtggcccgggctcgccgagagctggagcgcagccaccggcagctggagcagctggaagtg aagcgctcagggctggcaaaggagctggtggaggtacgggaggcgctgagcggtgccacg ctgcagcgggacatgctacaggccgagaaggccgaggtgacccaggcgctgaccaaggct gaggctggccgagtggagctggagctcaccatgaccaagctgagggcagaggaggcctca ctacgtgactccttgtccaaattgagcgccctcaatgagagcctcgctcaggacaagctg gacctgaaccgcctcgtggcccagctggaagaagagaaggcagccctgctgggccggcag cggcaggcggagcaggaggccaccttggctttgggcgagcagggccggctggagcagctg agactggagcaggaggtggagcggcagggcctggagggctccctgcgggctgcagagcag gcgcgggaggcgctggagcagcagctgcccacactgcgcagggagcgcacgcagctgcag gagcagctggcccagctctcccggcagctgagtggacgggagcaggagctggagcaggct cggcgggagtcacagcggcaggtggaagcgctggagcgggcagcccgggagaaggaggcg ctggccagggagcgggccagcctggctgtgcagctgtctgcagctgagcgtgaaggccgg agcctgttagaggaggccacccgcctacgcttggagaaggaagccctggagagcaacctg tttgatgtgcagcggcagctgacccaactcgaggtccgccgggagcagttggagtcagag ggacaagccctgctgctggccaaggaaaccctgactggggagctggcgggcctacggcag cagatgatagccacagagcagaaggtggccctggacaaggagctcctggcccagaagctg gtacaggccgagcgggaggcccaggcctctctgcgggagcagcaggtggcccacgagcag gacctgcagcggctccagcgagaaaaggaggcggcatggcgggaactggagacggagcgg gcacagctgcagagccagctgcagcgggaacaagaggaactgctggcccggctggaagct gagaaggaggaactgagtgaggagatcgcagccctgcagcaggagcgtgacgaaggcctg cttctggccgagagtgagaagcagcaggctctatccctgaaggagtctgagaaggcggcg ctgtcagagaagctgatgggtgtgcgccacagcctggccgccatctccctggacatggag cggcacaaacgagatgcccagagccggcaggagcaggaccggagtaccgtgaatgcgctg acatctgagctgcatgatctccgggcccagcttgaggaggctgctgcggcgcatgcccag gaagtgaagaggctgcaggagcaggcccgtgagctgggcaagcagcatgagtcctgcgtg cgtgaggctgaggagctccgcatgcagctgcgcctgctggaggacgcccgcgacgggctg cggcgagagctgctagaggcgcagcgcaaggtgcgtgagagccaggaagcccatgaggcc cagcgccaggaggtgggcgagttgcggcgcagcctgagcgagggagccaaggagcgtgag gccctgcggcgctccaatgaggagctgcgagctgccgtgcgcaaggctgagggcgagcgg atcagcctgaagcttgccaatgaggacaaggagcagaagctggcgctcctggaggaggca cgagcggcctcgggccgggaggctggggagctacgagccgggctgcaggaggtagagcgc tcacggctggaggcccgccgggagttgcaggagctacggcgccagatgaaggcgctggac agtgagaacgccaggctggcccgggagctggcagagctgcagggtcgcctggcactgggg gaaagggcagagaaggagaaccggcgggagtctctgggcctccgacagaagctacagaag ggtgaggccagcctggaggcggtgcggcaggagctccagggagcccagcggaagctgcag gagcaagagggagagttccggatccgcgagcgaggcctgatgagctccctggaggaggcg cgcaccacggaaaagcagcagctggaacacgcccgcggcctggagctgaagctggaggca gcccgggctgcggctgcagagctggggctgcggctgagcgcggccgagggccgagcccaa ggcctggaggctgagctggcccgcgtggagactcagcggcgcgcagccgaggctcagctc ggagccctgcgctctgctctgcgccggggcctgggcctcggccgtggagctggatggagc cctgccgcacggcccatgccagtgccctgctccccggctcgggaagcgcccgctggagaa agcgaggaaggattcaacagctccagccccctggaaaggagccctgggtcccagcctccg tcccctggacccaccacctctccggcaccaccagacctagaccccgaggctgtgcggggg gccctccgggaattcgtgcaggagctgcggagtgcccagagggagcgggatgaacttcgg acccaggctagtgccctgagccaccagctggccgagatggaggccgagagggacagtaca acctcacgggcccagcagctgcaaaaggcagtggctgagagtgaggaagcccggcgcagt atggatgggcggctgagtggagcccaggcacagctggcactacgggaggagagcatacgg cgtagcgagcgggaacgccgggccgcgcaggaccaggtggctgctctggagaggagcctg caggccacagagaacgagctgcgggcgagccaggagaaggtcagcaagctgaaggccaat gaggggaagctggagaacgacaagcggcgcctcaaggaggtgctggatgcctgcgagagc cgagcagtgaagctggagctgcagcggcgctctctcgagggggaactgcaacgcagccgc ctgggcctaagtgaccgcgaggcccaggcccaggtcctgcaggaccgggtggactctcta cagaggcaggtggcagatggcgaggtgaaggcgaggaccctgcagctgacggtggagcgg ctgaacggggccttggctaagctggaggagaatgaggggagcctgcatgataaggtgcag ggcctggccgaggccctggcccagagcaatgccagccttgccagctctcaggacaagaac ctgcacctgcagaaggccctgactgcctgtgaacatgaccgccaagtgctgcaggagcgg ctggatgccacccggcagaccttatcggaggtacggaagcagagcagctccctgggcgag ctggtacagacgacgcgggctgagctggcggacctggagctacagcgggcggaggccgag ggccagctacagcaattgcaggaggtgctgcggcagcgacaggagggggaggctgccgca ctgcactcggtccaaaagctgcaggaggagcggcggctgctgcaggagcgcctgggcagc ctgcagcaggccctggtgcagctggaagccgagaagtgggaggtggagcgcacggccctg cggctcgagaaggaccgtggtgccctcaggaggaccctggacaaggtggagcgggaaaag cttcgcagccacgagggcacagtgcggctgagtgtggagaagggccgcctggaccgcacg ctcacaggggctgagctcgagctggctgaggcccagacacacattctgcagctggaggcc cagatggtggccctggagcagaaccctagcgcggcccagcaggaggctgaggagcagcag aggcgggagctgcagcaggaggtggagcgcctacgcagtgcccaggtgcagactgagcgc accctggaggcgcgggagcgggcccacctccagaaagtgcgggggctggaggagcaggtg tccacgctgaagggacagctgcagcaggagcttcgacggaacttggcgtccttctcccca ccctccagccccccagagacatga

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