Ochotona princeps (American pika): 101524325
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Entry
101524325 CDS
T07609
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101524325 (RBFOX1)
Spliceosome [BR:
opi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101524325 (RBFOX1)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
101524325
NCBI-ProteinID:
XP_004586791
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All DBs
Position
6:9436494..10549552
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AA seq
418 aa
AA seq
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MLASQGVLVHPYGVPMILPAAPYFPGLIQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAE
YSAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSATDTSAQTVSGTATQTDEAAPTDG
QPQPQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYS
PEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVY
NTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGRVYAA
DPYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttggcatctcaaggagttctcgtgcatccctatggcgtgcccatgattctgccagca
gccccctactttcccggactgattcagggtaaccaggaagcagcagctgcccctgacaca
atggctcagccttacgcgtcggcccagttcgctccccctcagaacggcatccccgcggaa
tactcggccccgcacccgcaccccgcgcctgagtacaccggccagaccaccgtccccgag
cacacgttaaacctgtaccctcccgcccagacgcactcggagcagagcgccacggacacc
agcgcgcagaccgtctccggcaccgccacacagacagatgaggcagcacccacggatggc
cagccccagccccagccttcagaaaacacggagaacaagtcccagcccaagcggctgcat
gtctcgaacatccccttccggttccgggatccagacctccgacaaatgtttggtcaattt
ggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttc
gtaactttcgaaaatagtgccgatgcggacagggcgagggagaaattacacggcaccgtg
gtagagggccgtaaaatcgaggtcaataatgccacagcacgtgtaatgacaaataagaag
accgtcaacccttacacaaatggctggaaattgaatccagttgtgggtgcagtctacagt
cccgagttctatgcaggcaccgtgctgttgtgccaggcaaaccaggagggatcctccatg
tacagtgcccccagttcacttgtatatacttctgcaatgcccggcttcccatatccagcc
gccactgccgcggccgcctaccgaggggcgcatctacgaggccgtgggcgcaccgtgtac
aacaccttcagggccgcagcccctccgcctccgatcccggcctacggcggagtagtgtat
caagagcctgtgtatggcaataaattgctgcagggtggttacgccgcgtaccgctacgcc
cagcctaccccagccactgccgctgcctacagtgacagttacggacgagtttatgctgcc
gacccctaccaccacacacttgctccagcccccacctacggcgttggtgccatgaatgct
tttgcacccttgactgatgccaagactaggagccatgctgatgatgtgggtctcgttctt
tcttcattgcaggctagtatataccgagggggatacaaccgttttgctccatactaa
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