Ochotona princeps (American pika): 101526276
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Entry
101526276 CDS
T07609
Symbol
SNRNP70
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101526276 (SNRNP70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101526276 (SNRNP70)
Spliceosome [BR:
opi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
101526276 (SNRNP70)
Complex B
101526276 (SNRNP70)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
101526276
NCBI-ProteinID:
XP_004597056
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All DBs
Position
5:complement(2328728..2343763)
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AA seq
453 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA
ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERE
RRERSRERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERAR
RERERKEELRGGGGGGGGGGGGGGGGGGGGGDMAEPSEAGDAPPEDGPAGELGPDGPDGP
EEKGRDRDRDRRRSHRSERERRRDRDRDRDRDHKRGERGGERGRDEARGGGGGGQDNGLE
GLGSDGRDMYMEPEGGDGYLAPENGYLMEAAPE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcctgccgcccaacctcttggcgctcttcgcgccccgggaccccatcccg
tacctgccgcccctggagaaactgccacatgagaaacaccacaaccagccctactgcggc
atcgcaccctacatccgggagtttgaggaccctcgagatgcccctcctccgacgcgtgca
gagacccgcgaggagcgaatggagaggaagagaagggagaagatcgagcggcgccagcag
gaagtggagacggagctcaagatgtgggaccctcacaatgaccccaatgctcagggtgat
gccttcaagaccctctttgtggcaagagtgaactatgacacaacggaatccaagctccgg
agagagtttgaggtgtatgggcccattaaaaggatacacatggtttatagtaaacggtcg
ggaaagccgcggggctacgccttcatcgagtacgagcatgagcgggacatgcactccgct
tacaagcatgcagacggcaagaagattgacggccggagggtccttgtggacgtggagcgg
ggccggaccgtgaagggctggaggccccggcggctaggagggggcctcggaggcaccaga
agaggtggggccgatgtgaacatccgacactcgggccgtgatgatacatcccgctacgat
gaaaggcctggcccctccccgcttccccacagggaccgagaccgggaccgggagcgggag
cgcagagagcgaagccgggagcgagacaaggagcgtgaacggcggcgctcccgctcgcgg
gaccggaggagacgctcacggagccgagacaaggatgagcgacggcgctcccgggagcgg
agcaaggacaaggaccgggaccggaagcggcgcagcagtcggagccgggagcgggcaaga
cgcgagcgggagcgcaaggaggagctgcgtggtggcggtggcggcggcggcggcggcggc
ggcggaggaggaggaggaggaggtggcggtggtgacatggcagagccctcagaggcaggg
gatgcacctcctgaggatgggcctgctggggagcttggtcccgacggccctgatggcccc
gaggagaagggccgggatcgtgaccgggatcggcggcggagccaccggagtgagcgagag
cggcgcagggaccgggaccgggatcgggaccgtgaccacaaacggggggaacggggtggg
gaacggggtagggatgaggcccgaggtgggggtggtggcggccaggacaacgggctggaa
ggtttgggcagcgatggccgagacatgtacatggagcccgagggtggcgacgggtacctt
gctcctgagaatggctacctgatggaggccgcgcccgagtga
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