Ochotona princeps (American pika): 101526852 Help Entry 101526852         CDS       T07609                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism opi  Ochotona princeps (American pika) Pathway opi04151   PI3K-Akt signaling pathway opi04510   Focal adhesion opi04512   ECM-receptor interaction opi04820   Cytoskeleton in muscle cells opi04926   Relaxin signaling pathway opi04933   AGE-RAGE signaling pathway in diabetic complications opi04974   Protein digestion and absorption opi05146   Amoebiasis opi05165   Human papillomavirus infection opi05200   Pathways in cancer opi05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:opi00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101526852 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101526852 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101526852 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101526852 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     101526852 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     101526852 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101526852 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     101526852 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101526852 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     101526852 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101526852 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:opi04147]     101526852 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:opi00536]     101526852 (COL4A1) Exosome [BR:opi04147]  Exosomal proteins   Exosomal proteins of other cancer cells    101526852 (COL4A1) Glycosaminoglycan binding proteins [BR:opi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101526852 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  101526852 NCBI-ProteinID:  XP_012781806 LinkDB All DBs Position 8:complement(73318583..73432820) Genome browser AA seq 1645 aa AA seqDB search MGLRLGLWLLLLPAALLLHEEHSRAAAKGDCSGSGSGCGKCDCHGVKGQKGERGLPGLQG VIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPG PPGIPGCNGTKGERGPLGPPGLPGFMGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFP GAPGLPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSG PPGMPGHAQVQEKGDFATKGEKGQKGEPGFQGMPGIGEKGEPGRPGPRGKPGKDGEKGEK GSLGFPGDSGYPGLPGRVGPQGDKGEAGPPGLPGIVIGTGPSGEKGERGFPGTPGLRGEP GPKGFPGIQGQPGPPGFAVPGQAGAPGFPGERGEKGDQGFPGTSLPGPSGRDGTPGPPGP PGPPGQPGHTNGIVECQPGPPGDQGPPGVPGQPGLTGEVGEKGQKGDSCLVCDTEGLRGP PGPQGPPGEIGFPGQPGAKGDRGFPGRDGLGGLPGPQGVPGLMGQPGAKGEPGEIYFDAR LKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRG DIGPPGPPGFGPIGPIGDKGQAGFPGSPGSPGLPGPKGEAGQVVPLPGPPGAEGLPGSPG FQGPQGDRGFPGAPGRPGLPGEKGAMGQPGIGFPGPPGPKGVDGQPGDRGLPGSPGRPGF NGLPGSPGLPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGSIGGPGVPGEHGAIGPPGLQ GIRGDPGPPGVQGPVGPPGAPGVGPPGAMGPPGGQGPPGSAGPPGVKGEKGFPGFPGLDM PGPKGDKGAQGLPGLTGQSGMPGLPGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPVGI PGLPGEKGDQGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQ TGPTGDKGSRGDPGTPGVPGKDGQVGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGL PGTPGEKGVPGIPGPQGMPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDPGVAGFPGSP GEKGEKGSTGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLAGVPGIKGEAGVP GQPGPVGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGLQGFPGSKGDKGSKGDVGFPGLAG SPGIPGPKGEPGFMGPPGPQGQPGLPGAPGRPMEGPKGDRGPQGQPGLPGLPGPMGPPGL PGLDGLKGDKGSPGWPGVPGLPGPKGDQGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQ KGLPGLQGIKGDQGDQGVPGPKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPG PKGQQGVTGSEGTPGPPGIPGFDGAPGQKGEQGPFGPPGPRGFPGPPGPDGLPGSMGPPG TPSVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFS TMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVM AVHSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHG RGTCNYYANAYSFWLATIERSEMFK NT seq 4938 nt NT seq  +upstreamnt  +downstreamnt atggggctccggctcggcttgtggctgctgctgctgcctgccgccctcctactgcacgaa gagcacagccgggccgccgcgaagggtgactgctctggctctggctccggttgtgggaag tgtgactgccatggagtgaagggacaaaagggggaaagaggcctcccagggctacaagga gtcattggcttcccgggaatgcaaggacccgaggggccacagggaccaccgggacagaag ggtgacactggagagccaggactgcccggcacaaaagggacaaggggaccgccaggggcg gccggctaccccgggaacccaggacttcctggtatccctggccaagacggtccccccggc cctccaggtatcccaggatgcaacggtacaaagggagagagaggcccgctgggcccgcct ggcctgcctggattcatggggaaccctggccctcccgggctgccaggcatgaagggggat cccggggaaatacttggccatgtgcctgggatgctgcttaaaggcgaaagaggatttcct ggagccccggggctgccgggcccgccaggattgcctgggctgcaaggccccgtgggccca ccagggtttactggaccccccggtcccccaggccctcctggccctcccggtgaaaagggg cagatgggtctaagtttccaaggaccaaaaggcgacaagggagatcaaggtgtcagtggc cccccgggaatgccaggacatgctcaagtgcaggagaaaggggactttgccaccaaggga gaaaagggtcagaaaggcgaacctgggttccagggaatgccagggatcggcgagaaaggt gaacctggcaggccagggcctcgggggaaacctggcaaagacggcgagaaaggcgagaag gggagtttgggcttccctggagattcagggtacccagggctcccgggcagggtcggcccc cagggagacaagggagaagccggacctccaggcctgcctggcatcgtgataggcactgga ccttcaggagagaagggagagcgaggcttcccaggaacgccgggcctcagaggagagcca ggccctaaagggtttccagggatccaaggccagccgggccccccaggctttgctgtgccg ggccaggctggtgctcccggcttccctggtgagagaggagaaaaaggcgaccaaggcttc cctggcacatccctgccaggacccagtggaagggatggaaccccgggtcctcccgggccc cccggacctccaggacaacccggtcacaccaatggcattgtggagtgccagccggggcct ccgggtgaccagggccctcccggggttccagggcagccgggattgactggcgaagttgga gagaaaggtcagaagggggacagctgcctcgtctgtgacacagaagggttgcgtggcccc ccagggccgcaggggccccctggggagatcgggttcccgggacagccaggggccaagggc gaccgtggatttcccggcagggatggccttggaggactgccgggaccgcaaggtgttcca gggctgatggggcagcctggagccaagggcgagcctggagagatctactttgacgcacga ctcaagggtgacaaaggagaccccggcttcccaggacagcccggcatgccaggaagagcg gggtcccctgggagagatggccaccctggcctgcctggtcccaaaggctccccgggctca gtaggattgaaaggagagcgtggcccccctgggggtgttggattccctggaagtcgcggt gacatcggcccccctgggcctccaggatttggtccaattggccccatcggtgacaaagga caagcaggctttcctgggagccctgggtcccctggcctgccaggtccgaagggtgaagca ggacaggtcgtccccctgcctggccctccgggagcagaaggcctgccaggctcccccggc ttccaaggcccccaaggtgacaggggcttccctggagccccaggacggccaggacttccg ggagaaaagggcgccatgggccagcctgggatcggatttccagggcctccaggccccaag ggtgtggacggccagcctggagacaggggacttcctgggagcccaggccgcccagggttt aatggcctacctggcagccctggtctgccaggacaaaagggggagcctggaatcggccta ccaggactcaagggacttcctgggcttcctggcattcctggcacacccggggagaagggg agcattggagggcctggcgtccctggagagcatggagccatcgggccccctgggcttcag ggcatccgaggtgacccaggacctccaggcgtgcaaggccccgtgggccctccaggagct ccaggagtaggcccccccggagcaatgggcccccctggagggcagggaccgccggggtca gcaggtcctcctggggtgaaaggagagaagggttttcctggcttccctggactggacatg cccggcccaaaaggagataagggagcccaaggacttcccggcctaactggacagtcaggg atgcctggccttccgggccagcaggggacacctggaatccccggcttcccaggtcctaag ggagaaatgggcgtcatgggaacccctgggcaaccaggctctccaggaccagtgggtatt ccaggattgccgggtgaaaaaggagaccaaggcttcccaggatcctcgggacccagggga gaccccggcttcaagggtgacaaaggagatgtcgggctcccaggcaaacctggctccatg gacaaagtggacatgggcagcatgaagggacagaagggagaccagggagagaaaggacag actggaccaactggtgacaagggatcccgaggagaccctgggactccgggagttcctggg aaggatggccaggtgggacagccaggacagccaggcccaaaaggggatccgggcatcagt gggaccccaggtgctcctggactccctggacctaaaggctcggtcggcggcatgggcttg ccaggaacccctggagaaaaaggtgtgcctggcatccctggcccccagggcatgcctggc ctacctggagagaagggagccaaaggagagaagggccaggcaggtctgcctggcatcggg atccccggaaggcctggtgacaagggagacccgggcgtggctggattcccaggaagccct ggagagaagggggagaagggcagcaccgggattccaggaatgccagggtctccgggccct aaagggtctccagggagtgtaggctatccaggaagcccaggcttgcctggtgagaaaggt gacaaaggcctcccaggattggctggtgtccccggcatcaaaggagaagcaggtgttccc gggcagcctggtcctgtgggtccagctggccagaaaggcgagccaggcagcgatggcatc ccagggtctgcgggggagaagggcgagccaggcctgccaggaagaggattgcaagggttc ccaggaagcaaaggagacaaaggttccaaaggcgacgtgggtttcccaggactagccggc agccccgggatccctggacccaagggcgagccaggattcatgggtcctcccgggccccaa ggacagccggggctgcccggagctcccggccgccccatggaggggcccaaaggggatcga ggcccccaaggacagccaggcctgccagggcttccgggacccatggggccaccagggctc cctgggcttgatggactcaagggagacaagggcagtccaggatggccaggagttcctggg ctcccagggcccaagggagaccagggcttccagggcatgccgggcattggtggctccccg ggaatcacaggctccaagggcgatatggggccccccggcgttcccggatttcaaggtcag aaaggtcttcccggcctgcagggaatcaaaggcgaccagggagatcaaggcgtccctgga cctaaaggtcttcctggaccccctggaccccctggaccatatgacatcatcaaaggcgaa ccggggctccctggccctgaaggtccccctgggctgaaagggcttcagggacccccaggc cctaagggacagcaaggtgtgacaggctccgagggcacacctggccccccaggcattccc ggcttcgacggcgcgccaggccagaaaggggaacaagggccgttcgggcctccaggtcct agagggtttcctggccccccaggccccgatgggctgccaggctccatggggcctccgggt accccctccgttgaccacggcttcctagtgaccaggcacagtcaaaccatcgatgaccct cagtgtcctcctggcaccaaaattctctaccacgggtactccctgctgtacgtgcaaggc aacgagcgggctcacggccaggacctgggcacggccgggagctgcttgcggaagttcagc accatgcccttcctgttctgcaacatcaacaacgtgtgtaacttcgcctcccgcaacgac tactcgtactggctctccacccccgagcccatgcccatgtccatggcgcccatcactgga gacaacatcaggcccttcatcagcaggtgcgctgtgtgtgaggccccggccatggtgatg gccgtgcacagccagaccattcagatcccaccgtgccccaacggctggtcctcgctatgg atcggctattccttcgtgatgcacaccagtgccggcgctgaaggttccggccaagccctt gcttcccccggctcctgtctggaagagtttagaagtgcaccgttcatcgagtgccatggc cgtgggacctgcaactactacgccaacgcatacagcttctggctcgccaccatcgagaga agcgagatgttcaagtga

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