Ochotona princeps (American pika): 101530045
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Entry
101530045 CDS
T07609
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04142
Lysosome
opi04144
Endocytosis
opi04721
Synaptic vesicle cycle
opi04961
Endocrine and other factor-regulated calcium reabsorption
opi05016
Huntington disease
opi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101530045 (CLTC)
04142 Lysosome
101530045 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
101530045 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
101530045 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101530045 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
101530045 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101530045 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101530045 (CLTC)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101530045 (CLTC)
Exosome [BR:
opi04147
]
Exosomal proteins
Proteins found in most exosomes
101530045 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
101530045
NCBI-ProteinID:
XP_004591024
LinkDB
All DBs
Position
19:complement(27457708..27531181)
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccctgactatggaatcagacaaatttatctgcatt
cgagaaaaagtaggcgagcaagcccaggtggtaatcattgatatgaatgacccgagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagccagcaaagtaatt
gcattgaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccatactatgactgatgatgtcaccttttggaaatggatctctttgaatacggttgcc
cttgttacggataatgcagtttatcattggagtatggaaggcgagtctcagccagtgaaa
atgtttgatcgccattctagccttgcagggtgtcagattatcaattatcgcacagatgca
aagcaaaagtggttacttctgactggcatatccgcacagcaaaatcgtgtggtgggagct
atgcagctatattctgtagacagaaaagtgtctcagcctattgaaggacatgcggctagc
tttgcacagtttaaaatggaaggaaatgctgaagaatcaacgttattttgttttgcagta
cggggtcaagctggagggaagttacatatcattgaagttggcacacctcctactggaaac
cagccgtttccaaagaaggccgtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgctatgcagatcagtgaaaagcatgatgtggtattcctgattactaaatatggt
tacatccatctttatgatcttgaaactggtacctgcatctacatgaatagaatcagtgga
gaaacaatctttgttactgcaccacatgaagccacagctggaataattggagtaaacaga
aagggacaagttctatcagtgtgtgtagaagaagaaaacatcattccctacatcaccaat
gtcctacagaatcctgacttggctctaagaatggctgtgcgtaacaacctggccggtgct
gaagaactctttgctcggaaatttaacgctcttttcgcccaggggaattactcggaggca
gctaaggtggctgctaatgcacccaagggaatcttgcgtactccagacaccattcgtcgg
ttccagagtgtcccagcccagccaggtcagacttctcctctgcttcagtactttggaatc
cttctggatcagggacagctgaacaaatatgaatcattagaactgtgtaggcctgtactt
caacaagggcggaaacagcttttggagaaatggttaaaagaagataagctggagtgttct
gaagaactgggcgatcttgtgaaatctgtggaccctacattggcacttagtgtgtaccta
agggctaatgtcccaaataaagtcattcagtgctttgcagaaacaggtcaagttcagaag
attgtcttatatgctaagaaagttggctataccccagactggatctttttgctgagaaat
gtcatgcgtataagtccagatcaggggcagcaatttgcacagatgttggtgcaggatgaa
gagcctcttgctgatatcacacagattgtggatgtctttatggagtacaatctcattcag
caatgtactgcatttttgcttgatgctctgaagaacaaccgcccatctgaaggtccttta
cagactcgattgcttgagatgaatctcatgcatgcacctcaagttgcagatgctatccta
ggaaatcagatgttcacgcattatgaccgagctcatattgctcagttgtgtgaaaaggct
ggcttgctgcagcgtgcactggaacacttcactgatctgtatgatataaagcgtgcagtt
gttcacactcatctgcttaaccctgagtggttagtgaattactttggatccttatcagta
gaagactccctggaatgtctcagagccatgctgtctgctaatattcgtcagaatctgcaa
atctgtgttcaggtggcttctaagtatcatgagcaactgtcaactcaatctctgattgaa
ctttttgaatcattcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagccaggacccagatgtgcactttaagtacattcaagcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctacgatcctgagcgagtcaaa
aattttctcaaggaagcaaaactaacagatcagttaccacttatcattgtgtgtgatcga
tttgactttgtgcatgatttggtgctttacttatacagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaacccaagtcgacttcctgtagttattggaggattactt
gatgttgactgctctgaggatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggtcgaaaaaagaaacagattgaaactgcttctgcct
tggctggaggcccgaattcatgaagggtgtgaagagcctgctactcacaatgcgttagcc
aaaatctacatagacagcaataacaacccagagagattcctccgtgaaaatccctattat
gacagccgtgttgtgggaaagtattgtgagaagagagacccacatctggcctgtgttgct
tatgaacgtggccagtgtgatctggagcttataaacgtttgcaatgagaattctctcttc
aaaagcctttctcgctacctggtacgtcgaaaggatccagagttgtggggtagtgtgctc
ctggaaagcaatccctacaggaggcctctcattgaccaggttgtgcagacagccttgtcg
gagactcaggaccctgaagaagtgtcagtaactgtcaaggccttcatgactgcagacctt
cctaatgaactcattgaactcctggaaaaaatagtcctggataactctgtgttcagtgaa
cataggaatttgcaaaatctcctcattctcactgcaattaaggctgatcgtacacgtgtt
atggaatatattaaccgcctggataattatgatgcaccagatattgccaatatcgccatc
agtaatgagctgtttgaagaagcctttgccatattccggaaatttgatgtcaatacttca
gcagtgcaggttttgattgaacatattggaaacctggatcgggcttatgagtttgctgag
cgctgcaatgaacctgcagtctggagtcaacttgcaaaagcccagttgcagaaaggaatg
gtcaaagaagccattgattcttacattaaggctgatgatccttcatcatacatggaagtt
gttcaggctgccaatacaagcggaaactgggaagaattggtgaagtatttgcagatggcc
cgtaagaaggctcgagagtcctatgtggagacagaattgatatttgcactggctaaaaca
aaccgtcttgcagagttagaagaattcatcaatgggccaaataatgctcatatccagcaa
gttggtgatcgttgttatgatgaaaaaatgtatgatgctgctaagttgctatataacaat
gtttctaattttggacgcttggcatccactctggttcacttgggtgaatatcaggcagca
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgctttgcctgt
gtagacgggaaagagttccgtcttgctcagatgtgcgggctgcatattgttgtacatgca
gatgaattagaggaactgatcaactactaccaggatcgtggttattttgaagagctgata
actatgttggaagcagcactgggacttgagcgagctcacatgggaatgttcactgaatta
gccattctgtattctaaatttaagccacagaaaatgagggaacacctggagcttttctgg
tccagagtcaatattcctaaggtgctaagagctgcagaacaagcccatctttgggcagaa
ctggtctttttgtatgataagtatgaagaatatgataatgccataattaccatgatgaat
catccaactgatgcatggaaagaagggcagttcaaagatatcattaccaaggttgccaat
gtggaactatactacagagcgatacagttttacttggagttcaagccactcttgttaaat
gatttgttgatggtgctgtctccacgattggatcatactcgtgcggtcaattttttcagc
aaggttaaacagctaccactggtgaaaccttatttgcgttcagttcagaaccacaacaac
aaatctgtgaatgagtcattaaacaacctcttcattactgaagaggattatcaggctctc
agaacatcaatagatgcttatgacaactttgacaatatctcacttgctcagcgtctggaa
aagcatgaactcattgagtttagaagaattgctgcttatctgttcaaaggcaacaatcgt
tggaaacagagtgtggaactgtgcaagaaagacagcctttacaaggatgcaatgcaatat
gcctctgaatcgaaggatactgagctggctgaagagcttctacagtggtttttgcaggaa
gaaaaaagagaatgctttggagcctgtctctttacttgttatgaccttttaaggccggat
gttgtcttggaaactgcgtggaggcacaatatcatggatttcgccatgccctatttcatc
caggtcatgaaagaatacttgacaaaggtggacaaattagatgcttcagaatcattgaga
aaagaagaagaacaagctacagagacacaacccattgtttatggtcagccccagctgatg
ctaacagcaggacccagtgttgcagttcctccccaggcaccttttggttatggctatact
gccccaccctatgggcagccgcagcctggctttgggtacagcatgtaa
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integrated database retrieval system
