Ochotona princeps (American pika): 101534332
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Entry
101534332 CDS
T07609
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101534332 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101534332 (NFRKB)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
101534332 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
101534332
NCBI-ProteinID:
XP_004593365
LinkDB
All DBs
Position
1:6315562..6348097
Genome browser
AA seq
1271 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGAGHGSRIMEDCLLGGARVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQRAHLQQFLPHFPEDSPEQQHELILALFGGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLSSQQQYFHRLLKQILASRSDLLDMARRGGPALPVRQKRPSPSRS
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLS
TMDMKTVDKIELGDSDLKIMLKKHHEKRKYQPDHPDLLTGDLTLNDIMTRVNAGRKGSLA
ALYDLAILKRKVKEKEEKKKKKIKTIKSEAEDLVDSLSTADAVPPLSQAPSPLAVPAIKE
EPLEDLKHCLGFNEISSSFFSLLLEILLLENQASLPMLEERVLDWQASPASSLNSWFSAA
PNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQHWKLLGYVGRIGEKYLKSAVGRTD
YVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHS
LLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNAVVSGAL
DRLHYEKDPCVKYDIGRKLWIYLHRGRSEGEFERIHQAQAAAAKARKALQQKPKPPSKVK
SSSKENPIKVLNSGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPATPISPPPVSSVKSCP
TSVSEPAKSSSGVLLVSSPTMPQLGTMLSPASSQTPPSSQTATRVVSHSGSAGLPQVRVV
AQPSLPAVPPQSTGPTSALPQMPAGPQIRAPATATQTKVVPQTVMATVAVKAQTAAATVQ
RPGSGPAGLTVTSVPAAASPVSKPTTSSPGSSAASASTATVIQNVTGQNIIKQVAITGQI
GVKPQTGSSIPLTATNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTV
KLTQDLFGTGSGTAGKGISATLHVTSNPVHAADSPAKASSASAPSSTPAGTTVVKVTPDL
KPTETSSSAFRLMPALGVSVADQKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVA
THAKQGATVASGSGTVHTAAVSLPSMNATVSKTVAVASGAASNPLSIGTGAPTVRQVPVS
TTVVSTSQAGKLPTRITVPLSVISQPMKGKSVVTAPIIKGNLGANLGGLGRNIILTTMPA
GTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTT
APSPKQAPEQQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccatatgctgacggatcccctggaactgggtccctgtggagctggc
catggctcccgcattatggaggactgcctgctgggaggtgccagggttagtctgccagag
gaccttctggaagatcctgagatattcttcgatgttgtcagcctgtcaacctggcaggaa
gtgttaagtgactctcagcgtgcgcatctccagcagtttctgccgcacttccccgaggac
agccctgaacagcagcacgagctcatcctggccctgtttgggggggagaacttccgcttt
ggaaacccgctgcacatcgcccagaagctcttccgagatggacattttaaccctgaggtg
gtcaagtaccggcagctgtgcttcaagtcgcagtacaagcgatacctcagttctcagcag
cagtatttccatcggctgctcaaacagattcttgcttctcggagtgacctgctggacatg
gctcggcggggtggcccagccctccctgtgcggcagaagcggccttcaccgtcccgcagc
ccagaggagcgcgagtggcggactcagcagcgctacttgaaggtcttgagggaagtgaag
gaagagtgtggggacacagccctgtcctctgacgaagaagatctcagctcatggcttccg
agctctccagcacgttctcctagtcctgcggtgcccctgagggtggtgcccacgctttct
accatggatatgaaaaccgtagataaaatagaactgggggacagtgacctgaagataatg
ttaaagaagcaccatgagaagcggaaataccaaccagatcacccggaccttttgacaggg
gacctgactctcaatgacatcatgactcgcgtgaatgctggcaggaaaggctccctagca
gccttatatgatctggcgatccttaaaagaaaggttaaggagaaagaggaaaagaaaaag
aagaaaataaaaacgatcaagtcagaggcagaggatctggttgattccctgagcactgct
gatgctgtcccgcctctctctcaggccccatccccactggcagtacctgccatcaaggaa
gagccccttgaagacctcaagcattgccttggattcaatgaaatatcttccagcttcttt
tccttgctgttagagatcttactgttggagaatcaggctagccttcctatgctagaggaa
cgggttttggattggcaggcgtctccagccagctccctcaacagctggttctctgcagcc
cccaactgggctgagttggtgttaccagccctgcagtatctggctggggaaagccgagct
gttccttccagtttctctccatttgttgaattcaaagagaaaacccagcattggaaattg
cttggttatgttgggagaatcggggagaagtacctgaaatcagctgtgggaagaactgac
tatgtggtgcggcccagcacaggggaagaaaaacgggtttttcaggagcaggagcgctac
aggtacagccagccccataaggcgttcaccttccgcatgcacggctttgagtctgtggtg
gggccggtgaagggtgtgtttgacaaggagacctccctcaacaaggcccgggagcactcc
ctgctgcgctccgacaggcctgcctatgtcaccatcctctctctcgttcgagatgctgcc
gcccggctgcctaatggagaaggtacccgggcagagatctgtgaactgctcaaggactcc
caattcctcgcacccgatgtcaccagcacacaggtgaacgcggtggtgagcggcgctctg
gatcggctgcactacgagaaggacccgtgcgtgaagtacgacatcggccggaagctgtgg
atctatctgcatcgcggccgcagtgagggggagtttgagcggattcatcaagcacaagca
gctgcagctaaagccagaaaagctcttcagcaaaagcccaagcccccatccaaggtgaag
tccagcagcaaggagaatcccataaaggtcctgaacagtggcccttctgagcagagccag
atgagcctcagtgactccagcatgccacccaccccagtcacgcctgtgacgcccaccacg
ccagcgttgcctgccactcccatctcccctccccctgtgtcctcagtcaaaagttgcccc
accagtgtttcggaaccagctaagtcgagctctggtgttcttctggtgtcttcaccaaca
atgccacagcttggaacaatgctttcgccagcttccagccagactccacccagttctcag
actgccacccgggtagtaagccactctggctcagccggactgcctcaggtgcgcgtggta
gcccagcccagccttcctgctgtgcctccgcagtcaacaggacccacgtcagcactgcca
cagatgcctgcaggaccacagatcagggctccagctactgccacacagactaaagttgtg
ccccagacagtaatggccactgtagcagtcaaggcccagactgcagcggccaccgtgcag
cggcctggatctgggccagcagggctcacggtgacaagtgttccagctgcggccagccct
gtgagcaagccaaccacaagttctcctgggagctctgctgcaagtgcctccacggctact
gtcattcagaatgtcacaggacagaacatcatcaagcaggtggcaattactgggcagatt
ggtgtgaagccccaaactggtagcagcatcccactcacagccactaatttccgcatccag
ggtaaggatgtgttgcgtctgccaccttcttccatcactacagatgccaagggacagacg
gttctgcgcatcactccggacatgatggccacgttggccaagtcgcaggtgaccacggtg
aagttgacccaggacctctttgggacaggaagtggcactgcaggcaaaggcatctctgct
actttacatgttacttccaacccagtccatgccgctgatagccctgccaaggccagttca
gccagtgccccttcatccactccagcaggtactaccgtggttaaagtgactcctgacctc
aagccaacagaaacctcaagttcagcttttcgtttgatgccagcccttggtgtaagtgtg
gcagaccagaaggggaaaaacacagtggcgtcttccgaagcaaaaccagctgccacaatc
cgaattgtgcagggtctgggagtgatgcctcccaaagcaggccagaccatcaccgttgca
acccatgctaagcagggagccacagtggccagtgggtctggaactgtccacactgcagcg
gtgtccctgcccagcatgaatgctactgtgtctaagactgtggctgtggcttctggagct
gccagcaaccccctcagcattggaacgggagcccccaccgtgcggcaggtcccagtcagc
accacggtcgtgtccacatctcaggctgggaagcttcctacacggatcacagtgccgctg
tctgtgattagccagccgatgaagggcaagagtgtggtcacagccccgattatcaaaggc
aacctcggagccaaccttggtgggttgggccgcaacatcatcctcacaaccatgccagct
ggtaccaagctcattgctggaaataagcctgttagtttcctcactgcccagcagttgcaa
cagcttcaacagcaaggtcaggccacacaggtgcgcatccagactgtccctgcatcccat
ctccaacagggaacagcttctggttcctccaaagcagtctccactgttgttgttaccacg
gctccatctcctaaacaggcccctgaacagcagtga
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