Ochotona princeps (American pika): 101534416
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Entry
101534416 CDS
T07609
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101534416 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101534416 (REXO1)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
Pre-60S particles
RNases
101534416 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
101534416
NCBI-ProteinID:
XP_036354249
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MAHHSVPVLGVPHGGSCSGSTPSQAIPSSSSTGLCYDPCNPELPKPPTHRENGALGREAE
PRADMLELELVNKAIEAVRSEVELLETARELGSDEASALAPHDPDASPASPLDEDAFQLA
FDYNPGGCGYQPTPLATPSEPDSKYSLAALEQGQGRAGRGNGALEYVPKAVSQPRRYSRT
TSSSKYVLDDSKPSTDLEYDPLSNYSARHLSRSNKRPRGSRAGEAYSPALKRPCEPLGAC
EARFSDSDDDASPAPASPHKAGAESKPPGKPASKEGSAVEGSAPRETKEMAVQYDVEDLG
HPPGKPGSPARTPQDRGSPREGKPKKKRSGVPPASGPKDSTRKKDKMKDRDRGGSREGLG
PEKKGQPASSPRPRAELPEVTKKKPFSAGPAASSGKGGRPDRPGHQLSPTSSPRMLLESK
GGTKTPSGKLAGRKARSLDEGTSRDAPKLKKRALSHADLFGDESGDEDPGPGPGATRGWP
PALPNLSSDSDSDSDSSSPGHSPPKRLKASPPPPAPASPSSSSSSEDLDYSALEKEVAFD
SDPMEECLRIFNEPTPEGKGRLAPQPPKEDKSQEKGRTDPPALLPGQRRRIAHLAKQGKE
GEPLRRGPMAGPPARPPTAQEVCYRRAQQAQKESASLLQAAPRLPEKPSSVHISAPGEKR
RIAHVPNPRLATAPAGAKRTTPAASSNSQAPPGPEPSRQPLKTRTLAGMASKTTTPTVPK
RVAHSPSLQSLKKPIIPKEFGGKVPTAIRQRYLNMFLEECLKSCSSSEEAVEKALSEEKV
AYDRSPSKNIYLNVAVNTLKKLRGLVPNAVPSLSKTSGRKVVSHEMVLGGRLAAKTSFSL
NRPSSPRVEDLKGAALYSRLREYLLTEEQLKENGYPFPHPDRPGGAVIFTAEEKRPKDPS
CRICCRCGAEYLVSSSGRCIRDEECYYHWGRLRRNRVAGGWETQYMCCSTAIGSMGCQVA
KQHVQDGRKDCLEGFVKTFEKEVSGDAHAGIFALDCEMSYTTFGLELTRVTVVDTDMQVV
YDTFVKPDNEIVDYNTRFSGVTEADLVDVSITLRDVQAVLLSMFSADTILIGHSLQSDLL
ALKVIHRTVVDTSVLFPHRLGLPYKRSLRNLMADCLRQIIQDNVDGHSSSEDASACMHLL
IWKIREDAKTKR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccactctgtgcccgtcctcggcgtgccccatggtggctcgtgcagtggaagc
accccgtcacaggccattccctcctcttcctccacagggctgtgttacgacccctgcaac
cccgagctgcccaagccccccacccaccgggagaatggcgccctgggccgggaggccgaa
ccacgtgcagacatgctggagctggagctggtcaacaaggccatcgaggccgtgcgcagt
gaggtggagctgcttgagacggcgcgggagctcggctcagacgaggcctctgccctggcg
ccccacgaccccgatgccagccccgcctcccctctggacgaagacgccttccaactggcc
tttgactacaaccccggcggctgcggctaccagcccaccccgctggccaccccctcagag
ccggacagcaagtactcgctggcggcgctggagcagggccaaggcagggctggaaggggc
aatggcgccctggaatacgtgcccaaggccgtgagccagccccggcgctacagccgcacc
acctcaagcagcaagtacgtcctggacgactccaagccttccacggacctggagtacgac
cccctgtccaactactcggcccggcacctgagcaggtccaacaagcggccccggggctcc
cgcgccggcgaggcctacagcccggcgctcaagaggccctgtgagcccttaggcgcttgc
gaggcccgcttctccgactccgatgacgatgccagcccggcccctgccagtccccacaag
gcaggggccgagagcaagccccccgggaagccggcctccaaggagggctcagctgtggag
ggcagcgccccgcgggagaccaaagagatggccgtgcagtatgacgtggaggacctcggc
catccgcccgggaagcctggctcccctgccaggaccccgcaggaccgaggcagccccagg
gaggggaagcccaagaagaagaggagtggggtccccccagcctcaggccccaaggacagc
actcgcaagaaagacaaaatgaaggacagggaccgaggagggtccagagaggggctcggc
cccgagaagaagggccagccggccagcagcccccggcccagggccgagctgccggaagtg
accaagaaaaagccattctcggccggcccggcggccagttcagggaaggggggcaggcct
gaccggcccgggcaccagttgagccccaccagcagcccccgcatgctgctggagagcaag
ggtggcaccaagaccccgtctgggaagctggcagggcgcaaagcccgctcgctggatgag
ggcacttcccgggatgcccccaagctgaagaaacgcgccctgagccacgccgacctcttt
ggggacgagagcggggatgaggacccgggcccagggcccggggcaacacggggctggccc
ccggccctccccaacctcagctccgactctgactccgactctgactcctccagccctggc
cactccccgcccaagcgcctcaaggcctctcccccgccacccgctccagcctccccctct
tcctcctcctcctccgaggacctggactactcggccctggagaaggaggtggccttcgac
tcggaccccatggaagagtgtctgcgcatcttcaacgagcccacccccgagggcaagggc
cgcttggcccctcagcctcccaaggaagacaagagccaggagaagggccgcacggacccc
ccagcgttgctccccgggcagaggaggaggattgcccatcttgccaagcaaggcaaggag
ggggagcccctgaggaggggtcccatggccgggcccccggcccggccccccaccgcccag
gaggtgtgctaccgacgggctcagcaggcgcaaaaggagtctgccagcctgctgcaggcc
gcaccccggctgccggagaagccctcctccgtccacatctccgcccctggcgagaagagg
aggattgcccacgtccccaacccccgcctagctacagcccccgcaggcgccaagagaacg
acccccgcagccagcagcaacagccaggcgccccctggccccgagcccagtcggcagcca
ctaaagacacgcacgctggcaggcatggcgtccaagaccacgacccccacggtccccaag
cgggtggctcacagcccatctctgcagagcctcaagaaacccattatcccaaaagagttt
gggggcaaggtccccaccgccatccgccagcgctatctcaacatgttcctggaggaatgc
ctcaagtcttgctcttccagcgaggaggccgtggagaaggccctgagtgaagagaaggtg
gcgtatgaccgcagccccagcaagaacatctacctgaacgttgctgtgaacacactcaag
aagctgcggggcctggtgcccaacgccgtgcccagcctcagcaagaccagtggccggaag
gtcgtgtcccacgagatggtgctgggaggcaggttggccgccaagaccagcttctcgctc
aaccgtcccagcagcccccgcgtggaagatctgaaaggcgctgccctgtatagccgcctc
cgagagtacctgctgaccgaggagcagctcaaagagaatggctaccccttcccgcacccg
gaccggcccggtggcgccgtcatcttcacggccgaggagaagcgacccaaggacccctcc
tgcaggatctgctgccgctgtggcgccgagtacctcgtgtcttcctccggccgctgcatc
cgcgatgaggagtgctattaccactggggccggctgcgccggaaccgagtggctggcggc
tgggagactcagtacatgtgctgctccacggccatcgggtccatgggctgccaggtggcc
aagcaacacgtgcaggacggccggaaggactgcctggagggctttgtgaaaaccttcgag
aaggaggtctccggggacgctcacgcaggcatcttcgccctcgactgtgagatgtcctac
accaccttcggcctggagctgacccgcgtcacagtggtggacaccgacatgcaggtggtc
tacgacaccttcgtcaagcccgacaatgagattgtcgactacaacacccggttttccggg
gtgactgaggccgacctggtggatgtaagcatcacgctgagggacgtgcaggctgtcctg
ctgagcatgttcagtgccgacaccatcctcatcggacacagcctccagagcgacctgctg
gctctgaaggtcatccaccgcaccgtggtggacacgtccgtgctgttcccgcaccgcctg
ggcctgccgtacaagcgctccctgcgcaatctgatggccgactgcctcaggcagatcatc
caggacaacgtggacgggcacagctcgagcgaggacgccagcgcctgcatgcacctgctc
atctggaagatccgagaggacgccaagaccaagcgatga
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