KEGG   Ochotona princeps (American pika): 101534416
Entry
101534416         CDS       T07609                                 
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101534416 (REXO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:opi03009]
    101534416 (REXO1)
Ribosome biogenesis [BR:opi03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    101534416 (REXO1)
SSDB
Motif
Pfam: EloA-BP1
Other DBs
NCBI-GeneID: 101534416
NCBI-ProteinID: XP_036354249
LinkDB
Position
Unknown
AA seq 1152 aa
MAHHSVPVLGVPHGGSCSGSTPSQAIPSSSSTGLCYDPCNPELPKPPTHRENGALGREAE
PRADMLELELVNKAIEAVRSEVELLETARELGSDEASALAPHDPDASPASPLDEDAFQLA
FDYNPGGCGYQPTPLATPSEPDSKYSLAALEQGQGRAGRGNGALEYVPKAVSQPRRYSRT
TSSSKYVLDDSKPSTDLEYDPLSNYSARHLSRSNKRPRGSRAGEAYSPALKRPCEPLGAC
EARFSDSDDDASPAPASPHKAGAESKPPGKPASKEGSAVEGSAPRETKEMAVQYDVEDLG
HPPGKPGSPARTPQDRGSPREGKPKKKRSGVPPASGPKDSTRKKDKMKDRDRGGSREGLG
PEKKGQPASSPRPRAELPEVTKKKPFSAGPAASSGKGGRPDRPGHQLSPTSSPRMLLESK
GGTKTPSGKLAGRKARSLDEGTSRDAPKLKKRALSHADLFGDESGDEDPGPGPGATRGWP
PALPNLSSDSDSDSDSSSPGHSPPKRLKASPPPPAPASPSSSSSSEDLDYSALEKEVAFD
SDPMEECLRIFNEPTPEGKGRLAPQPPKEDKSQEKGRTDPPALLPGQRRRIAHLAKQGKE
GEPLRRGPMAGPPARPPTAQEVCYRRAQQAQKESASLLQAAPRLPEKPSSVHISAPGEKR
RIAHVPNPRLATAPAGAKRTTPAASSNSQAPPGPEPSRQPLKTRTLAGMASKTTTPTVPK
RVAHSPSLQSLKKPIIPKEFGGKVPTAIRQRYLNMFLEECLKSCSSSEEAVEKALSEEKV
AYDRSPSKNIYLNVAVNTLKKLRGLVPNAVPSLSKTSGRKVVSHEMVLGGRLAAKTSFSL
NRPSSPRVEDLKGAALYSRLREYLLTEEQLKENGYPFPHPDRPGGAVIFTAEEKRPKDPS
CRICCRCGAEYLVSSSGRCIRDEECYYHWGRLRRNRVAGGWETQYMCCSTAIGSMGCQVA
KQHVQDGRKDCLEGFVKTFEKEVSGDAHAGIFALDCEMSYTTFGLELTRVTVVDTDMQVV
YDTFVKPDNEIVDYNTRFSGVTEADLVDVSITLRDVQAVLLSMFSADTILIGHSLQSDLL
ALKVIHRTVVDTSVLFPHRLGLPYKRSLRNLMADCLRQIIQDNVDGHSSSEDASACMHLL
IWKIREDAKTKR
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggctcaccactctgtgcccgtcctcggcgtgccccatggtggctcgtgcagtggaagc
accccgtcacaggccattccctcctcttcctccacagggctgtgttacgacccctgcaac
cccgagctgcccaagccccccacccaccgggagaatggcgccctgggccgggaggccgaa
ccacgtgcagacatgctggagctggagctggtcaacaaggccatcgaggccgtgcgcagt
gaggtggagctgcttgagacggcgcgggagctcggctcagacgaggcctctgccctggcg
ccccacgaccccgatgccagccccgcctcccctctggacgaagacgccttccaactggcc
tttgactacaaccccggcggctgcggctaccagcccaccccgctggccaccccctcagag
ccggacagcaagtactcgctggcggcgctggagcagggccaaggcagggctggaaggggc
aatggcgccctggaatacgtgcccaaggccgtgagccagccccggcgctacagccgcacc
acctcaagcagcaagtacgtcctggacgactccaagccttccacggacctggagtacgac
cccctgtccaactactcggcccggcacctgagcaggtccaacaagcggccccggggctcc
cgcgccggcgaggcctacagcccggcgctcaagaggccctgtgagcccttaggcgcttgc
gaggcccgcttctccgactccgatgacgatgccagcccggcccctgccagtccccacaag
gcaggggccgagagcaagccccccgggaagccggcctccaaggagggctcagctgtggag
ggcagcgccccgcgggagaccaaagagatggccgtgcagtatgacgtggaggacctcggc
catccgcccgggaagcctggctcccctgccaggaccccgcaggaccgaggcagccccagg
gaggggaagcccaagaagaagaggagtggggtccccccagcctcaggccccaaggacagc
actcgcaagaaagacaaaatgaaggacagggaccgaggagggtccagagaggggctcggc
cccgagaagaagggccagccggccagcagcccccggcccagggccgagctgccggaagtg
accaagaaaaagccattctcggccggcccggcggccagttcagggaaggggggcaggcct
gaccggcccgggcaccagttgagccccaccagcagcccccgcatgctgctggagagcaag
ggtggcaccaagaccccgtctgggaagctggcagggcgcaaagcccgctcgctggatgag
ggcacttcccgggatgcccccaagctgaagaaacgcgccctgagccacgccgacctcttt
ggggacgagagcggggatgaggacccgggcccagggcccggggcaacacggggctggccc
ccggccctccccaacctcagctccgactctgactccgactctgactcctccagccctggc
cactccccgcccaagcgcctcaaggcctctcccccgccacccgctccagcctccccctct
tcctcctcctcctccgaggacctggactactcggccctggagaaggaggtggccttcgac
tcggaccccatggaagagtgtctgcgcatcttcaacgagcccacccccgagggcaagggc
cgcttggcccctcagcctcccaaggaagacaagagccaggagaagggccgcacggacccc
ccagcgttgctccccgggcagaggaggaggattgcccatcttgccaagcaaggcaaggag
ggggagcccctgaggaggggtcccatggccgggcccccggcccggccccccaccgcccag
gaggtgtgctaccgacgggctcagcaggcgcaaaaggagtctgccagcctgctgcaggcc
gcaccccggctgccggagaagccctcctccgtccacatctccgcccctggcgagaagagg
aggattgcccacgtccccaacccccgcctagctacagcccccgcaggcgccaagagaacg
acccccgcagccagcagcaacagccaggcgccccctggccccgagcccagtcggcagcca
ctaaagacacgcacgctggcaggcatggcgtccaagaccacgacccccacggtccccaag
cgggtggctcacagcccatctctgcagagcctcaagaaacccattatcccaaaagagttt
gggggcaaggtccccaccgccatccgccagcgctatctcaacatgttcctggaggaatgc
ctcaagtcttgctcttccagcgaggaggccgtggagaaggccctgagtgaagagaaggtg
gcgtatgaccgcagccccagcaagaacatctacctgaacgttgctgtgaacacactcaag
aagctgcggggcctggtgcccaacgccgtgcccagcctcagcaagaccagtggccggaag
gtcgtgtcccacgagatggtgctgggaggcaggttggccgccaagaccagcttctcgctc
aaccgtcccagcagcccccgcgtggaagatctgaaaggcgctgccctgtatagccgcctc
cgagagtacctgctgaccgaggagcagctcaaagagaatggctaccccttcccgcacccg
gaccggcccggtggcgccgtcatcttcacggccgaggagaagcgacccaaggacccctcc
tgcaggatctgctgccgctgtggcgccgagtacctcgtgtcttcctccggccgctgcatc
cgcgatgaggagtgctattaccactggggccggctgcgccggaaccgagtggctggcggc
tgggagactcagtacatgtgctgctccacggccatcgggtccatgggctgccaggtggcc
aagcaacacgtgcaggacggccggaaggactgcctggagggctttgtgaaaaccttcgag
aaggaggtctccggggacgctcacgcaggcatcttcgccctcgactgtgagatgtcctac
accaccttcggcctggagctgacccgcgtcacagtggtggacaccgacatgcaggtggtc
tacgacaccttcgtcaagcccgacaatgagattgtcgactacaacacccggttttccggg
gtgactgaggccgacctggtggatgtaagcatcacgctgagggacgtgcaggctgtcctg
ctgagcatgttcagtgccgacaccatcctcatcggacacagcctccagagcgacctgctg
gctctgaaggtcatccaccgcaccgtggtggacacgtccgtgctgttcccgcaccgcctg
ggcctgccgtacaagcgctccctgcgcaatctgatggccgactgcctcaggcagatcatc
caggacaacgtggacgggcacagctcgagcgaggacgccagcgcctgcatgcacctgctc
atctggaagatccgagaggacgccaagaccaagcgatga

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