Ochotona princeps (American pika): 101535838
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Entry
101535838 CDS
T07609
Symbol
PCNX1
Name
(RefSeq) pecanex-like protein 1 isoform X1
Organism
opi
Ochotona princeps (American pika)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pecanex_C
Motif
Other DBs
NCBI-GeneID:
101535838
NCBI-ProteinID:
XP_004584488
LinkDB
All DBs
Position
20:complement(21730030..21892657)
Genome browser
AA seq
2339 aa
AA seq
DB search
MGSQTLQILRQGVWAALSGGWYYDPHQATFVNALHLYLWLFLLGLPFTLYMALPSSMIIV
AVYCPVIAAVFIVLKMVNYRLHRALDAGEVVDRSTNEFTGQRAQAEQGNCSTRRKDSNGP
SDPGGGIEMSEFIREATPPVGCSSRNSYAGLDPSNQIGSGSRLGTAATIKGDTDPAKTSD
DISLSLGQSSSLCKEGSEEQDLAADRKLFRLVSNDSFISIQPSLSSCGQDLPRDFSDKVS
LPSHSHHHHVDQSLSSACDTEMASLVPLHSHSYRKDHRPRGVPRTSSSAVAFPDSSLNDF
PLYQQRRGLDPVSELESSKPHSGSKESLVENSCLSGEFRLTSDLKISSSQPPTKSGKSKP
LKADKSVDSLRSLSTRSSGSTESYCSGTDRDTNSTVSSYKSEQTSSTHIESILSEHDESP
KISKKSSRKKECCADPENSCAGDQRTSRDTAALEVSADPGAPEAREPASSEEVHNQRALS
TSASEEANKNPHANEVTSPEDRPVEKTVDNKEEQSEKPVIPVDSKICKDAGGKQKEGDVR
PKSSSLIYRTASAHKSGRRRTGKKRASSFDSSRHRDYISFRGVSGTKPHSAVFCQDEDSS
DQSDLSRASSVHSAHQFSSDSSSSTTSHSRQSPEGRYSALKTKHVHKERGTDSEHTHKAH
LGPEGAGKKRATRRTSSTSSAKTRARVLSLDSGTVACLNDSNRLMAPESIKPLTTSKSDL
EAKEGEVLDELCLLGRASQLETVTRSRNSLPSQAAFPEGEEQDAASGAAQASEEAVSFRR
ERSTFRRQAVRRRHNAGSNPTPPTLLIGSPLSLQDGQQSQQSTAQVKVQSRPPSQAAVLS
ASASLLVRNGSVHLEASHDNASTVGGSSLHDELGKFSSTLYETGGCDMSLVNFEPAARRA
SNICDTDSHVSSSTSVRFYPHDVLSLPQIRLNRLLTIDTDLLEQQDIDLSPDLANTYGQT
EEAAQKVKHYYRFWILPQLWIGINFDRLTLLALFDRNREILENVLAVILAILVAFLGSVL
LIQGFFRDIWVFQFCLVIASCQYSLLKSVQPDSSSPRHGHNRIIAYSRPVYFCLCCGLIW
LLDYGSRNLTTTKFKLYGITLTNPLVFISARDLVIVFTLCFPVVFFVGLLPQVNTFVMYL
CEQLDIHIFGGNATTSLLAALYSCVCSIVAVALLYGLCYGALKDSWDGQHIPVLFSVFCG
LLVAVSYHLSRQSSDPSVLFSLVQSKIFPKTEEKNPEDPLSEVKDPLPEKLRNSVSDRLQ
SDLVVCVVIGVLYFAIHVSTVFTVLQPALRYVLYALVGFVGFVAHYVLPQVRKQLPWHCF
SHPLLKTVEYKQYEVRNAATMMWFEKLHVWLLFVEKNVIYPLVVLNELSSSAETIASPKK
LDTELGALMITIAGLKLLRSSFSSPTYQYVTVIFTVLFFKFDYEAFSETMLLDLFFMSIL
FNKLRELLYKLQFVYTYIAPWQITWGSAFHAFAQPFAVPHSAMLFIQAAVSAIFSTPLNP
FLGSAIFITSYVRPVKFWERDYNTKRVDHSNTRLASQLDRNPGSDDNNLNSIFYEHLTRS
LQHSLCGDLLLGRWGNYSTGDCFILASDYLNALVHLIEIGNGLVTFQLRGLEFRGTYCQQ
REVEAITEGVEEDEGFCCCEPGHIPHVLSFNAAFSQRWLAWEVIVTKYILEGYSITDNSA
ASMLQVFDLRKVLTTYYVKGIIYYVTTSSKLEEWLANETMQEGLRLCADRNYVDVDPTFN
PNIDEDYDHRLAGISRESFCVIYLNWIEYCSSRRAKPLDVDKDSSLVTLCYGLCVLGRRA
LGTASHHMSSNLESFLYGLHALFKGDFRISSIRDEWIFADMELLRKVVVPGIRMSIKLHQ
DHFTSPDEYDDPTVLYEAIVSHEKNLVIAHEGDPAWRSAVLANSPSLLALRHVMDDGTNE
YKIIMLNRRYLSFRVIRVNKECVRGLWAGQQQELVFLRNRNPERGSIQNAKQALRNMINS
SCDQPIGYPIFVSPLTTSYSDSHEQLKEILGGPISLRNIRNFIVSTWHRLRKGCGAGCNS
GGNIEDSDAGGGISGAGNSATSTGDPHSNAPQGNTANPGQGSGTGLHPPVTSYPPALGTS
HSAHSVQSSLVRQSPARASGASQSSYCYSSRHSSLRMSSTGFVPCRRSSTSQISLRNLPS
SIQSRLSMVNQMELPGQSGLASVQHGLPSSSSSSQSIPACKHHTLVGFLGTEGGQSSATD
SQPGNTLLSPTTNSHARKGEVIYRVQIVDPSQILEGINLSKRKELQWPDEGIRLKAGKNS
WKDWSPQEGMEGHVIHRWVPCSRDPGTRSHIDKAVLLVQIDDKYVTVIETGVLELGAEV
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagacgctgcagatcctccggcagggggtgtgggccgcgctcagcgggggc
tggtactacgacccgcaccaggccaccttcgtgaacgcgctgcacctctacctgtggctc
tttctgctcggcctgcccttcaccctctacatggcccttccttcttccatgattatagtc
gcagtttattgtcctgtaatagctgctgtattcattgttctgaagatggtcaactatcga
ctgcacagagcgctcgatgctggagaagttgtagacaggagtacaaatgagttcacaggt
cagcgagcccaagctgaacagggcaactgttcaaccaggagaaaagacagcaatggcccc
agtgatcctggtggagggattgaaatgtctgagttcattcgagaagccacacccccagtt
ggttgcagctcaagaaattcttacgccggtctagatccaagcaatcagattggatctggt
tctcgtcttggaacagcagcaaccattaaaggagatacagaccctgcgaagacttctgat
gatatcagtttaagtctgggacagagttctagtctttgtaaagaaggaagtgaagaacaa
gatttggcagctgatcggaagctcttccgtctggtctccaatgactccttcatctccatt
caaccttccttatcctcttgtggacaggacctgcccagggacttcagtgacaaagtgagc
ttgccaagtcacagccaccaccaccatgttgatcagtctctgtccagcgcctgtgacaca
gaaatggcttcgcttgtacctttacattcacactcttacaggaaggaccaccgacctcga
ggagtgccacggacttccagctcagctgtggcttttccagactcttcgctgaatgacttc
cctctctatcaacaaagacgtggtctagacccagttagtgagttagaatcttccaagcct
cattctggatccaaagaatctttggtggaaaattcttgtttatctggggagtttcggctt
acttctgacctaaaaatcagcagttctcagccacccacaaaaagtgggaagagcaaacct
ttgaaggcagacaaaagcgtggacagcttgaggagtctgagcacacggagtagtgggtcc
actgagagctactgcagtgggacggaccgtgacaccaatagtactgtcagcagctacaaa
agtgagcagactagctccacacacatagaaagcatcttgtcagaacatgacgagtctcca
aaaataagcaagaagagtagtaggaaaaaagagtgctgtgctgatcctgagaacagctgt
gccggtgaccagaggactagcagggacacggctgccttggaagtcagtgcagatcctggg
gctcccgaggccagggagcctgcgagctcagaggaggtgcacaaccagagagcgctcagc
acgtctgcgtctgaagaagccaacaaaaacccccatgccaatgaagttacgtcaccagag
gataggccagtggagaaaactgtggacaacaaggaggaacagagtgaaaagccagtgatt
ccagtggattcaaaaatttgtaaggatgctggtggaaagcagaaggaaggggatgtgcga
cctaaatcctccagcttaatttaccggacagcttctgcccacaagtcaggcaggagacgg
acaggaaagaaacgggccagcagttttgactccagtcggcatagggactacatttccttt
cgaggtgtttctggtaccaaacctcatagtgctgtattttgtcaggatgaggactctagt
gatcagagtgacctgagtagagcgtcaagtgttcactctgctcaccagttcagcagcgat
agctcttctagcaccacttctcattcgcgtcagtctcccgagggcaggtacagtgctcta
aagaccaaacatgtccacaaagaaaggggcacggattctgaacacacacacaaggctcat
ctgggtcctgagggagctggcaaaaagcgggccacacgacggacttccagcaccagtagt
gccaagacccgggcccgtgtgttgagcttggacagtggcacggtagcatgcttgaatgac
tcaaatagactcatggcccctgaaagtataaaacccttaacaacttccaaatcagacctt
gaggccaaagagggagaggtgctagatgagctatgtttactgggccgggcttcacagtta
gagacagtcacgcgctctaggaatagcttgccaagccaggctgcatttcctgaaggggaa
gagcaggacgcagccagtggagcagcacaggccagcgaggaggcggtgtcatttcgccgt
gaacgcagcacatttaggcgccaggcagtgcggcgccggcacaatgcaggcagtaaccct
acccctcccaccttgctcatcggatcacccctaagccttcaagatggtcagcaaagccag
cagtccacagcccaggtcaaagtccagtcccgtcccccttcccaggctgcagtgctcagt
gctagtgcctccttgctggtgagaaatgggagtgtccacttagaagcatcacatgacaat
gcatctactgtaggcggtagcagtttgcacgatgaacttggtaagttctcttccactcta
tatgagactggtggatgtgatatgtcacttgtgaattttgaaccagcagcaagaagagca
tctaatatctgtgacacggattctcatgtatccagttctacctcagttcgcttttatcca
catgatgtgctttctctcccacagattcgactgaatagactgttgaccatcgatacagat
ttattggagcaacaggacattgatctaagccctgacttggcaaacacttatggccaaaca
gaagaagctgcccaaaaggttaaacactattaccgcttttggatcctgcctcagctgtgg
attggcattaattttgacagactcacacttttggccctgtttgatagaaatcgtgagatc
ctggaaaatgtgctggctgtcattctggcgattcttgtggcttttttgggatctgttctt
ctcatacaaggcttcttcagagatatttgggtcttccagttctgcctggtaatagccagc
tgtcagtactcactgcttaagagcgttcagccagattcttcctctcccagacacggtcat
aatcgtattattgcctacagtcgaccagtttatttctgtttatgttgtggtcttatctgg
ctcttggattatggcagcagaaatcttacgacaactaagtttaaattgtatggaataacc
ctcaccaatccattggtgttcatatcagccagggatttagttatcgtgtttactctctgt
ttcccagtagtgtttttcgttggtctcctgcctcaagtcaacacatttgtcatgtacctt
tgtgaacaattggatatccatatctttggtggtaatgccacgaccagcctgcttgcagca
ctgtacagctgtgtctgtagcattgtggctgttgccttactgtatggattgtgctatgga
gctttaaaggattcttgggatggccagcatatcccagtactcttctccgttttttgtggt
ttgttagtggccgtatcctatcatctcagccgacagagcagtgatccatcagtacttttc
tctctggtgcaatctaagatttttccaaaaacagaagagaagaatccagaagaccctttg
tctgaagtaaaagatccattgcctgaaaaacttagaaattctgttagtgaccgtctgcag
tctgacctagtcgtgtgcgttgtaatcggtgtgctgtattttgctattcatgtgagcaca
gtgtttacggttttgcagcccgcactcaggtatgtgttgtatgcactggtcggctttgtg
gggtttgtggcccattatgtgctgcctcaagttagaaaacagctaccctggcactgtttc
tctcatcctctgctgaagacagtagagtataagcaatatgaagttcgaaatgcagctacc
atgatgtggtttgagaaacttcacgtgtggcttctttttgtggagaagaatgttatctat
cccttggttgttctcaatgaactgagtagcagtgcggagacaattgccagcccgaagaaa
ctggatacagaactaggtgctttgatgatcaccattgctggtttgaagttgctgcgctcc
tccttcagcagccctacctaccagtatgtcacagtcatctttactgtgctcttcttcaag
tttgactatgaagctttttcagagaccatgctattagatctcttcttcatgtccatactc
ttcaacaagcttcgagaactcctttacaagttgcagttcgtgtatacctacattgcccca
tggcagatcacgtggggttctgctttccatgccttcgcacagcctttcgcagtgccccat
tcagccatgctgtttattcaggctgctgtctcagccatcttctccactccactgaacccc
ttcctgggaagtgcaatattcatcacttcatatgtccgaccagtgaaattctgggagaga
gactataacacgaaacgagtggatcattcaaatacaagattggcttcccaacttgataga
aacccagggtcagatgacaacaatctgaattccatcttctacgaacatttaacccgatcc
ctacaacacagtctgtgtggagacttgctgctgggacgctggggcaactacagcacagga
gactgcttcatcctggcctccgactatctcaatgccttggtgcacctcatagagataggc
aacggtctggtcaccttccagcttcgggggctggaattcagaggcacctactgtcaacaa
cgggaagtggaggccattaccgaaggtgtagaggaagatgaaggattttgctgttgtgaa
cctggccatattcctcatgtgctttcatttaatgctgcatttagccagcgctggctagcc
tgggaagtaattgtcaccaaatatattctagagggctatagcatcactgataacagtgct
gcttctatgctgcaagtctttgatcttcggaaagtactcaccacttactatgtcaagggc
ataatttattacgttacaacctcctccaaattagaagagtggctagctaatgagaccatg
caggaaggactacgtctgtgtgcagatcggaattacgtcgatgtagatccgacatttaat
ccgaacattgatgaagactatgaccatcgactcgcaggcatatccagggagagtttctgt
gtgatttacctcaactggattgagtattgttcttcccgaagggcaaagccactggacgtg
gacaaggattcgtccctggtgactctttgttatggactttgtgttcttggacggagagct
ttggggactgcatctcaccatatgtccagtaatttagagtcattcctctatggattgcat
gccctatttaagggagatttccgtatttcttcaattcgagatgaatggatctttgctgac
atggaattgctaagaaaagtagtagttcctggaatccgtatgtccattaaacttcaccag
gatcatttcacttctccagatgaatatgatgaccccactgtgctctacgaagccattgtg
tctcatgaaaaaaacctcgtgatagcccacgaaggggaccctgcgtggcggagtgcggtc
ctggccaactctccctccttgctcgctctgcgacatgtcatggacgatggcaccaatgaa
tacaaaatcatcatgctcaacagacgctacctgagcttcagggtcatcagagtgaacaag
gaatgtgtccgaggtctttgggcaggacaacaacaggagcttgtttttctgcgtaatcgt
aacccggagagaggtagcatccagaatgccaagcaagctctaagaaacatgataaattca
tcctgtgatcaacctattggctacccgatctttgtttcgccactgacaacttcttactct
gacagccatgaacagcttaaagagattcttgggggacctatcagtttgagaaatatcaga
aacttcatcgtgtcaacatggcacaggctaaggaaaggctgtggagctggatgtaacagt
ggtggcaacattgaagattcggatgccggaggtggaatttccggtgctggtaacagtgca
acaagcaccggtgatccccacagcaacgcgccccagggaaacactgcaaatcctgggcag
ggatcaggaacagggctccatccaccagtcacatcctaccctcctgcactaggcaccagc
cacagcgctcactcggtgcagtccagtctggtcagacagtcccctgctcgcgcctctgga
gccagccagtcttcctactgctacagcagccgccactcatctctccgcatgtccagcaca
gggtttgtgccttgtcggcgctcttccaccagtcagatatcacttcgcaatttgccgtca
tccatccagtcccgcctctccatggtgaaccagatggaactccccgggcaaagtggcctg
gccagtgtgcagcatggtctgccttcttccagcagctccagccaaagcatccctgcctgc
aaacatcacaccctcgtgggctttcttgggacagagggaggtcagagcagtgccactgac
tcccagccgggcaacactttattaagtcctacaactaattcgcatgccagaaagggggag
gtgatctacagagtccaaattgtggatcccagtcaaattctggaagggatcaacctgtca
aaaaggaaagagttgcagtggcctgatgaggggatccggttaaaagccgggaagaacagc
tggaaagactggagtccccaggagggcatggaaggccacgtgattcaccgatgggtgcct
tgcagcagagacccaggcactagatcccacatcgacaaggcagtgcttctggtccagatt
gacgataaatatgtgactgtaattgaaactggggtgttggaactcggggctgaagtgtga
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